Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNA5SP67-201ENST00000516422 131 ntBASIC0.17□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 AL353691.2-201ENST00000443795 59 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD18.2-201ENST00000459604 70 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD22.1-201ENST00000516331 125 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 MIR409-201ENST00000362237 79 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP169-201ENST00000517268 117 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4493-201ENST00000584016 73 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4290-201ENST00000583807 95 ntBASIC0.14□□□□□ -2.39
SH3RF3Q8TEJ3 AC138207.3-201ENST00000585289 166 ntBASIC0.14□□□□□ -2.39
SH3RF3Q8TEJ3 MIR604-201ENST00000384880 94 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 MIR518B-201ENST00000385127 83 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 SNORA17.4-201ENST00000391287 132 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP66-201ENST00000517178 101 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4317-201ENST00000637586 65 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 Y_RNA.189-201ENST00000363959 112 ntBASIC0.12□□□□□ -2.39
SH3RF3Q8TEJ3 SNORD75.1-201ENST00000408373 60 ntBASIC0.12□□□□□ -2.39
SH3RF3Q8TEJ3 RNU6-300P-201ENST00000459080 104 ntBASIC0.11□□□□□ -2.39
SH3RF3Q8TEJ3 SNORD114-17-201ENST00000364699 75 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP266-201ENST00000410273 108 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 RPL35AP4-201ENST00000412007 102 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 AC093726.3-201ENST00000637588 150 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 MIR581-201ENST00000384895 96 ntBASIC0.09□□□□□ -2.4
SH3RF3Q8TEJ3 MIR548N-201ENST00000408742 75 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 AP000533.3-201ENST00000447704 118 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 AC013734.1-201ENST00000619329 111 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 RNU6-68P-201ENST00000516576 104 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-1-201ENST00000578940 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-2-201ENST00000579107 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-3-201ENST00000579566 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-4-201ENST00000617599 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD114-11-201ENST00000363738 75 ntBASIC0.06□□□□□ -2.4
SH3RF3Q8TEJ3 RNA5SP26-201ENST00000362406 119 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD95.1-201ENST00000364099 68 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.457-201ENST00000384237 111 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 AC104692.1-201ENST00000472406 90 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 SNORA18.1-201ENST00000363418 128 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 MIR507-201ENST00000385234 94 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.603-201ENST00000410571 108 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 AC090616.4-201ENST00000448026 115 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 RNY1P9-201ENST00000532431 109 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 RNU6-563P-201ENST00000364872 108 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD114-12-201ENST00000365400 75 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD111B-201ENST00000408587 80 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 RNU6-176P-201ENST00000517196 105 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4645-201ENST00000583158 77 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR3666-201ENST00000607845 111 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR101-1-201ENST00000362265 75 ntBASIC0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4263-201ENST00000584745 83 ntBASIC0.01□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD60-201ENST00000383903 83 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 RNA5SP300-201ENST00000391197 107 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 SNORA13-201ENST00000458790 133 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4723-201ENST00000585070 81 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4788-201ENST00000639104 80 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 RNU6-485P-201ENST00000363475 107 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR214-201ENST00000385214 110 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD4A-201ENST00000459174 72 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR204-201ENST00000385200 110 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 RPS29P8-201ENST00000445109 171 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 AC120024.2-201ENST00000576526 175 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 MIR23C-201ENST00000579846 100 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 RNU6-431P-201ENST00000383874 107 ntBASIC-0.06□□□□□ -2.42
SH3RF3Q8TEJ3 U6.97-201ENST00000636904 101 ntBASIC-0.06□□□□□ -2.42
SH3RF3Q8TEJ3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 MIR147A-201ENST00000385079 72 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 RNU6-894P-201ENST00000517094 105 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 MIR224-201ENST00000384889 81 ntBASIC-0.08□□□□□ -2.42
SH3RF3Q8TEJ3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.09□□□□□ -2.42
SH3RF3Q8TEJ3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.09□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.1□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.11□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.11□□□□□ -2.43
SH3RF3Q8TEJ3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 RNU6-695P-201ENST00000391157 104 ntBASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 RNU6-133P-201ENST00000383989 107 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 SNORD64-201ENST00000386683 67 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR548AX-201ENST00000580117 73 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR4436A-201ENST00000585278 85 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR6818-201ENST00000621576 65 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.14□□□□□ -2.43
SH3RF3Q8TEJ3 MIR8064-201ENST00000612863 90 ntBASIC-0.14□□□□□ -2.43
SH3RF3Q8TEJ3 SNORD18C-201ENST00000362704 69 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms