Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 RNA5SP67-201ENST00000516422 131 ntBASIC0.17□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD114-31-201ENST00000363219 75 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 AL353691.2-201ENST00000443795 59 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD18.2-201ENST00000459604 70 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 SNORD22.1-201ENST00000516331 125 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.16□□□□□ -2.38
SH3RF3Q8TEJ3 MIR409-201ENST00000362237 79 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP169-201ENST00000517268 117 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4493-201ENST00000584016 73 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR371B-201ENST00000638082 66 ntBASIC0.15□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4290-201ENST00000583807 95 ntBASIC0.14□□□□□ -2.39
SH3RF3Q8TEJ3 AC138207.3-201ENST00000585289 166 ntBASIC0.14□□□□□ -2.39
SH3RF3Q8TEJ3 MIR604-201ENST00000384880 94 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 MIR518B-201ENST00000385127 83 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 SNORA17.4-201ENST00000391287 132 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP66-201ENST00000517178 101 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 AP001180.6-201ENST00000584918 159 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 MIR4317-201ENST00000637586 65 ntBASIC0.13□□□□□ -2.39
SH3RF3Q8TEJ3 Y_RNA.189-201ENST00000363959 112 ntBASIC0.12□□□□□ -2.39
SH3RF3Q8TEJ3 SNORD75.1-201ENST00000408373 60 ntBASIC0.12□□□□□ -2.39
SH3RF3Q8TEJ3 RNU6-300P-201ENST00000459080 104 ntBASIC0.11□□□□□ -2.39
SH3RF3Q8TEJ3 SNORD114-17-201ENST00000364699 75 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 RNA5SP266-201ENST00000410273 108 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 RPL35AP4-201ENST00000412007 102 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 AC093726.3-201ENST00000637588 150 ntBASIC0.1□□□□□ -2.39
SH3RF3Q8TEJ3 MIR581-201ENST00000384895 96 ntBASIC0.09□□□□□ -2.4
SH3RF3Q8TEJ3 MIR548N-201ENST00000408742 75 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 AP000533.3-201ENST00000447704 118 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 AC013734.1-201ENST00000619329 111 ntBASIC0.08□□□□□ -2.4
SH3RF3Q8TEJ3 RNU6-68P-201ENST00000516576 104 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-1-201ENST00000578940 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-2-201ENST00000579107 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-3-201ENST00000579566 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 MIR3179-4-201ENST00000617599 84 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.07□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD114-11-201ENST00000363738 75 ntBASIC0.06□□□□□ -2.4
SH3RF3Q8TEJ3 RNA5SP26-201ENST00000362406 119 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD95.1-201ENST00000364099 68 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
SH3RF3Q8TEJ3 SNORD114-16-201ENST00000363044 70 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.457-201ENST00000384237 111 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 AC104692.1-201ENST00000472406 90 ntBASIC0.04□□□□□ -2.4
SH3RF3Q8TEJ3 SNORA18.1-201ENST00000363418 128 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 MIR507-201ENST00000385234 94 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.603-201ENST00000410571 108 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 Y_RNA.610-201ENST00000410681 103 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 AC090616.4-201ENST00000448026 115 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 RNY1P9-201ENST00000532431 109 ntBASIC0.03□□□□□ -2.4
SH3RF3Q8TEJ3 RNU6-563P-201ENST00000364872 108 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD114-12-201ENST00000365400 75 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD111B-201ENST00000408587 80 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 RNU6-176P-201ENST00000517196 105 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4645-201ENST00000583158 77 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR3666-201ENST00000607845 111 ntBASIC0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR101-1-201ENST00000362265 75 ntBASIC0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4263-201ENST00000584745 83 ntBASIC0.01□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD60-201ENST00000383903 83 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 RNA5SP300-201ENST00000391197 107 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 SNORA13-201ENST00000458790 133 ntBASIC0□□□□□ -2.41
SH3RF3Q8TEJ3 Y_RNA.223-201ENST00000364290 113 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4723-201ENST00000585070 81 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 MIR4788-201ENST00000639104 80 ntBASIC-0.01□□□□□ -2.41
SH3RF3Q8TEJ3 RNU6-485P-201ENST00000363475 107 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR214-201ENST00000385214 110 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 SNORD4A-201ENST00000459174 72 ntBASIC-0.02□□□□□ -2.41
SH3RF3Q8TEJ3 MIR204-201ENST00000385200 110 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 RPS29P8-201ENST00000445109 171 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 AC120024.2-201ENST00000576526 175 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC-0.03□□□□□ -2.41
SH3RF3Q8TEJ3 MIR1295B-201ENST00000636144 60 ntBASIC-0.04□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.320-201ENST00000365144 102 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.382-201ENST00000365672 114 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 MIR23C-201ENST00000579846 100 ntBASIC-0.05□□□□□ -2.42
SH3RF3Q8TEJ3 RNU6-431P-201ENST00000383874 107 ntBASIC-0.06□□□□□ -2.42
SH3RF3Q8TEJ3 U6.97-201ENST00000636904 101 ntBASIC-0.06□□□□□ -2.42
SH3RF3Q8TEJ3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 SNORA32.1-201ENST00000364514 115 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 MIR147A-201ENST00000385079 72 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 RNU6-894P-201ENST00000517094 105 ntBASIC-0.07□□□□□ -2.42
SH3RF3Q8TEJ3 MIR224-201ENST00000384889 81 ntBASIC-0.08□□□□□ -2.42
SH3RF3Q8TEJ3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.09□□□□□ -2.42
SH3RF3Q8TEJ3 SNX3P1X-201ENST00000414887 175 ntBASIC-0.09□□□□□ -2.42
SH3RF3Q8TEJ3 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.1□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.129-201ENST00000363392 110 ntBASIC-0.11□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.134-201ENST00000363435 105 ntBASIC-0.11□□□□□ -2.43
SH3RF3Q8TEJ3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 RNU6-695P-201ENST00000391157 104 ntBASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.12□□□□□ -2.43
SH3RF3Q8TEJ3 RNU6-133P-201ENST00000383989 107 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 SNORD64-201ENST00000386683 67 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR548AX-201ENST00000580117 73 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR4436A-201ENST00000585278 85 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 Y_RNA.781-201ENST00000620301 103 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 MIR6818-201ENST00000621576 65 ntBASIC-0.13□□□□□ -2.43
SH3RF3Q8TEJ3 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.14□□□□□ -2.43
SH3RF3Q8TEJ3 MIR8064-201ENST00000612863 90 ntBASIC-0.14□□□□□ -2.43
SH3RF3Q8TEJ3 SNORD18C-201ENST00000362704 69 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms