Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR23C-201ENST00000579846 100 ntBASIC0.34□□□□□ -2.36
SH3RF1Q7Z6J0 AL590491.3-201ENST00000610731 82 ntBASIC0.34□□□□□ -2.36
SH3RF1Q7Z6J0 SNORD114-9-201ENST00000364370 72 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.382-201ENST00000365672 114 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 MIR581-201ENST00000384895 96 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 snoU13.19-201ENST00000459148 104 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 AC013734.1-201ENST00000619329 111 ntBASIC0.33□□□□□ -2.36
SH3RF1Q7Z6J0 SNORD114-17-201ENST00000364699 75 ntBASIC0.32□□□□□ -2.36
SH3RF1Q7Z6J0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.32□□□□□ -2.36
SH3RF1Q7Z6J0 RNU6-68P-201ENST00000516576 104 ntBASIC0.32□□□□□ -2.36
SH3RF1Q7Z6J0 SNORD114-5-201ENST00000362928 70 ntBASIC0.31□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.603-201ENST00000410571 108 ntBASIC0.31□□□□□ -2.36
SH3RF1Q7Z6J0 MIR4802-201ENST00000581881 80 ntBASIC0.31□□□□□ -2.36
SH3RF1Q7Z6J0 AC093726.3-201ENST00000637588 150 ntBASIC0.31□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.129-201ENST00000363392 110 ntBASIC0.3□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.189-201ENST00000363959 112 ntBASIC0.3□□□□□ -2.36
SH3RF1Q7Z6J0 RNU6-929P-201ENST00000384429 107 ntBASIC0.29□□□□□ -2.36
SH3RF1Q7Z6J0 MIR5190-201ENST00000581537 80 ntBASIC0.29□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.134-201ENST00000363435 105 ntBASIC0.28□□□□□ -2.36
SH3RF1Q7Z6J0 Y_RNA.223-201ENST00000364290 113 ntBASIC0.28□□□□□ -2.36
SH3RF1Q7Z6J0 MIR507-201ENST00000385234 94 ntBASIC0.28□□□□□ -2.36
SH3RF1Q7Z6J0 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.28□□□□□ -2.36
SH3RF1Q7Z6J0 AP000533.3-201ENST00000447704 118 ntBASIC0.27□□□□□ -2.37
SH3RF1Q7Z6J0 SNORA13-201ENST00000458790 133 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 MIR3179-1-201ENST00000578940 84 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 MIR3179-2-201ENST00000579107 84 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 MIR3179-3-201ENST00000579566 84 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 MIR3179-4-201ENST00000617599 84 ntBASIC0.26□□□□□ -2.37
SH3RF1Q7Z6J0 Y_RNA.320-201ENST00000365144 102 ntBASIC0.25□□□□□ -2.37
SH3RF1Q7Z6J0 Z95118.1-201ENST00000421372 247 ntBASIC0.25□□□□□ -2.37
SH3RF1Q7Z6J0 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SH3RF1Q7Z6J0 RNU6-30P-201ENST00000384561 107 ntBASIC0.24□□□□□ -2.37
SH3RF1Q7Z6J0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.23□□□□□ -2.37
SH3RF1Q7Z6J0 RNA5SP25-201ENST00000410815 110 ntBASIC0.23□□□□□ -2.37
SH3RF1Q7Z6J0 AC090616.4-201ENST00000448026 115 ntBASIC0.23□□□□□ -2.37
SH3RF1Q7Z6J0 AC104692.1-201ENST00000472406 90 ntBASIC0.23□□□□□ -2.37
SH3RF1Q7Z6J0 RNA5SP67-201ENST00000516422 131 ntBASIC0.23□□□□□ -2.37
SH3RF1Q7Z6J0 SNORD115.2-201ENST00000391126 59 ntBASIC0.22□□□□□ -2.37
SH3RF1Q7Z6J0 AC120024.2-201ENST00000576526 175 ntBASIC0.22□□□□□ -2.37
SH3RF1Q7Z6J0 RNU6-563P-201ENST00000364872 108 ntBASIC0.21□□□□□ -2.38
SH3RF1Q7Z6J0 MIR4263-201ENST00000584745 83 ntBASIC0.21□□□□□ -2.38
SH3RF1Q7Z6J0 U6.97-201ENST00000636904 101 ntBASIC0.2□□□□□ -2.38
SH3RF1Q7Z6J0 MIR379-201ENST00000362218 67 ntBASIC0.19□□□□□ -2.38
SH3RF1Q7Z6J0 RNA5SP26-201ENST00000362406 119 ntBASIC0.19□□□□□ -2.38
SH3RF1Q7Z6J0 RNA5SP331-201ENST00000364986 107 ntBASIC0.19□□□□□ -2.38
SH3RF1Q7Z6J0 MIR4290-201ENST00000583807 95 ntBASIC0.19□□□□□ -2.38
SH3RF1Q7Z6J0 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.19□□□□□ -2.38
SH3RF1Q7Z6J0 MIR204-201ENST00000385200 110 ntBASIC0.18□□□□□ -2.38
SH3RF1Q7Z6J0 RNU6-758P-201ENST00000516292 89 ntBASIC0.18□□□□□ -2.38
SH3RF1Q7Z6J0 SNORA32.1-201ENST00000364514 115 ntBASIC0.17□□□□□ -2.38
SH3RF1Q7Z6J0 MIR1295A-201ENST00000408463 79 ntBASIC0.17□□□□□ -2.38
SH3RF1Q7Z6J0 Y_RNA.781-201ENST00000620301 103 ntBASIC0.17□□□□□ -2.38
SH3RF1Q7Z6J0 SNORD18C-201ENST00000362704 69 ntBASIC0.16□□□□□ -2.38
SH3RF1Q7Z6J0 RNU6-836P-201ENST00000362920 107 ntBASIC0.16□□□□□ -2.38
SH3RF1Q7Z6J0 SNORD114-15-201ENST00000364687 72 ntBASIC0.16□□□□□ -2.38
SH3RF1Q7Z6J0 MIR4645-201ENST00000583158 77 ntBASIC0.16□□□□□ -2.38
SH3RF1Q7Z6J0 MIR4768-201ENST00000585270 74 ntBASIC0.16□□□□□ -2.38
SH3RF1Q7Z6J0 SNORA18.1-201ENST00000363418 128 ntBASIC0.15□□□□□ -2.39
SH3RF1Q7Z6J0 MIR3666-201ENST00000607845 111 ntBASIC0.15□□□□□ -2.39
SH3RF1Q7Z6J0 RNA5SP368-201ENST00000364298 116 ntBASIC0.14□□□□□ -2.39
SH3RF1Q7Z6J0 MIR548AJ2-201ENST00000408539 92 ntBASIC0.14□□□□□ -2.39
SH3RF1Q7Z6J0 RNU6-1091P-201ENST00000363945 107 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 RNA5SP224-201ENST00000365069 126 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 SNORD114-12-201ENST00000365400 75 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 Y_RNA.519-201ENST00000384553 102 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 RNU6-695P-201ENST00000391157 104 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 IGLVI-20-201ENST00000519296 130 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
SH3RF1Q7Z6J0 SNORD114-31-201ENST00000363219 75 ntBASIC0.11□□□□□ -2.39
SH3RF1Q7Z6J0 SNORD114-11-201ENST00000363738 75 ntBASIC0.11□□□□□ -2.39
SH3RF1Q7Z6J0 MIR4493-201ENST00000584016 73 ntBASIC0.11□□□□□ -2.39
SH3RF1Q7Z6J0 MIR1295B-201ENST00000636144 60 ntBASIC0.1□□□□□ -2.39
SH3RF1Q7Z6J0 Y_RNA.260-201ENST00000364628 101 ntBASIC0.09□□□□□ -2.4
SH3RF1Q7Z6J0 MIR4788-201ENST00000639104 80 ntBASIC0.09□□□□□ -2.4
SH3RF1Q7Z6J0 AP001180.6-201ENST00000584918 159 ntBASIC0.08□□□□□ -2.4
SH3RF1Q7Z6J0 MIR604-201ENST00000384880 94 ntBASIC0.07□□□□□ -2.4
SH3RF1Q7Z6J0 RNA5SP300-201ENST00000391197 107 ntBASIC0.07□□□□□ -2.4
SH3RF1Q7Z6J0 MIR4667-201ENST00000578933 66 ntBASIC0.07□□□□□ -2.4
SH3RF1Q7Z6J0 MIR409-201ENST00000362237 79 ntBASIC0.06□□□□□ -2.4
SH3RF1Q7Z6J0 SNORD4A-201ENST00000459174 72 ntBASIC0.05□□□□□ -2.4
SH3RF1Q7Z6J0 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.05□□□□□ -2.4
SH3RF1Q7Z6J0 MIR147A-201ENST00000385079 72 ntBASIC0.03□□□□□ -2.4
SH3RF1Q7Z6J0 FTX_4.1-201ENST00000616291 147 ntBASIC0.03□□□□□ -2.4
SH3RF1Q7Z6J0 RNU6-1169P-201ENST00000363537 103 ntBASIC0.02□□□□□ -2.41
SH3RF1Q7Z6J0 RNU6-912P-201ENST00000363800 104 ntBASIC0.02□□□□□ -2.41
SH3RF1Q7Z6J0 AC021146.6-201ENST00000514659 117 ntBASIC0.02□□□□□ -2.41
SH3RF1Q7Z6J0 SNORD114-16-201ENST00000363044 70 ntBASIC0.01□□□□□ -2.41
SH3RF1Q7Z6J0 SNORD95.1-201ENST00000364099 68 ntBASIC0□□□□□ -2.41
SH3RF1Q7Z6J0 AC018880.2-201ENST00000414265 201 ntBASIC0□□□□□ -2.41
SH3RF1Q7Z6J0 RNU6-79P-201ENST00000362511 107 ntBASIC-0.01□□□□□ -2.41
SH3RF1Q7Z6J0 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.01□□□□□ -2.41
SH3RF1Q7Z6J0 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
SH3RF1Q7Z6J0 Y_RNA.335-201ENST00000365299 96 ntBASIC-0.02□□□□□ -2.41
SH3RF1Q7Z6J0 RNU6-431P-201ENST00000383874 107 ntBASIC-0.02□□□□□ -2.41
SH3RF1Q7Z6J0 SNORD45C-201ENST00000383893 79 ntBASIC-0.02□□□□□ -2.41
SH3RF1Q7Z6J0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.02□□□□□ -2.41
SH3RF1Q7Z6J0 MIR6818-201ENST00000621576 65 ntBASIC-0.02□□□□□ -2.41
SH3RF1Q7Z6J0 MIR101-1-201ENST00000362265 75 ntBASIC-0.03□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms