Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
NUBP1P53384 SNORD114-17-201ENST00000364699 75 ntBASIC0.37□□□□□ -2.35
NUBP1P53384 MIR204-201ENST00000385200 110 ntBASIC0.37□□□□□ -2.35
NUBP1P53384 RNU6-894P-201ENST00000517094 105 ntBASIC0.37□□□□□ -2.35
NUBP1P53384 MIR4636-201ENST00000582271 80 ntBASIC0.37□□□□□ -2.35
NUBP1P53384 MIR5589-201ENST00000579442 60 ntBASIC0.36□□□□□ -2.35
NUBP1P53384 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.36□□□□□ -2.35
NUBP1P53384 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.35□□□□□ -2.35
NUBP1P53384 RNU6-133P-201ENST00000383989 107 ntBASIC0.34□□□□□ -2.36
NUBP1P53384 MIR507-201ENST00000385234 94 ntBASIC0.33□□□□□ -2.36
NUBP1P53384 AL590491.3-201ENST00000610731 82 ntBASIC0.33□□□□□ -2.36
NUBP1P53384 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.33□□□□□ -2.36
NUBP1P53384 MIR548N-201ENST00000408742 75 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 RNA5SP25-201ENST00000410815 110 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 MIR3179-1-201ENST00000578940 84 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 MIR3179-2-201ENST00000579107 84 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 MIR3179-3-201ENST00000579566 84 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 MIR6718-201ENST00000616153 80 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 MIR3179-4-201ENST00000617599 84 ntBASIC0.32□□□□□ -2.36
NUBP1P53384 Y_RNA.603-201ENST00000410571 108 ntBASIC0.31□□□□□ -2.36
NUBP1P53384 RPL35AP4-201ENST00000412007 102 ntBASIC0.31□□□□□ -2.36
NUBP1P53384 AP000533.3-201ENST00000447704 118 ntBASIC0.31□□□□□ -2.36
NUBP1P53384 MIR5190-201ENST00000581537 80 ntBASIC0.31□□□□□ -2.36
NUBP1P53384 SNORD114-12-201ENST00000365400 75 ntBASIC0.27□□□□□ -2.37
NUBP1P53384 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.27□□□□□ -2.37
NUBP1P53384 MIR4768-201ENST00000585270 74 ntBASIC0.26□□□□□ -2.37
NUBP1P53384 Y_RNA.189-201ENST00000363959 112 ntBASIC0.25□□□□□ -2.37
NUBP1P53384 SNORD114-15-201ENST00000364687 72 ntBASIC0.25□□□□□ -2.37
NUBP1P53384 Y_RNA.129-201ENST00000363392 110 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 SNORA18.1-201ENST00000363418 128 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 Y_RNA.185-201ENST00000363894 100 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 SNORD111B-201ENST00000408587 80 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 MIR1295B-201ENST00000636144 60 ntBASIC0.24□□□□□ -2.37
NUBP1P53384 IGLVI-20-201ENST00000519296 130 ntBASIC0.23□□□□□ -2.37
NUBP1P53384 RNU6-758P-201ENST00000516292 89 ntBASIC0.22□□□□□ -2.37
NUBP1P53384 MIR3666-201ENST00000607845 111 ntBASIC0.21□□□□□ -2.38
NUBP1P53384 SNORA32.1-201ENST00000364514 115 ntBASIC0.19□□□□□ -2.38
NUBP1P53384 MIR371B-201ENST00000638082 66 ntBASIC0.19□□□□□ -2.38
NUBP1P53384 MIR4802-201ENST00000581881 80 ntBASIC0.18□□□□□ -2.38
NUBP1P53384 MIR4290-201ENST00000583807 95 ntBASIC0.18□□□□□ -2.38
NUBP1P53384 RNU6-485P-201ENST00000363475 107 ntBASIC0.17□□□□□ -2.38
NUBP1P53384 RNA5SP331-201ENST00000364986 107 ntBASIC0.16□□□□□ -2.38
NUBP1P53384 RNU6-30P-201ENST00000384561 107 ntBASIC0.16□□□□□ -2.38
NUBP1P53384 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
NUBP1P53384 AC013734.1-201ENST00000619329 111 ntBASIC0.15□□□□□ -2.39
NUBP1P53384 MIR4788-201ENST00000639104 80 ntBASIC0.14□□□□□ -2.39
NUBP1P53384 Y_RNA.382-201ENST00000365672 114 ntBASIC0.13□□□□□ -2.39
NUBP1P53384 SNORD115.2-201ENST00000391126 59 ntBASIC0.12□□□□□ -2.39
NUBP1P53384 AC090616.4-201ENST00000448026 115 ntBASIC0.11□□□□□ -2.39
NUBP1P53384 Y_RNA.223-201ENST00000364290 113 ntBASIC0.1□□□□□ -2.39
NUBP1P53384 AC120024.2-201ENST00000576526 175 ntBASIC0.1□□□□□ -2.39
NUBP1P53384 MIR379-201ENST00000362218 67 ntBASIC0.09□□□□□ -2.4
NUBP1P53384 SNORD114-31-201ENST00000363219 75 ntBASIC0.09□□□□□ -2.4
NUBP1P53384 AC021146.6-201ENST00000514659 117 ntBASIC0.09□□□□□ -2.4
NUBP1P53384 RNA5SP67-201ENST00000516422 131 ntBASIC0.09□□□□□ -2.4
NUBP1P53384 U6.97-201ENST00000636904 101 ntBASIC0.09□□□□□ -2.4
NUBP1P53384 RNA5SP368-201ENST00000364298 116 ntBASIC0.07□□□□□ -2.4
NUBP1P53384 MIR604-201ENST00000384880 94 ntBASIC0.07□□□□□ -2.4
NUBP1P53384 SNORD4A-201ENST00000459174 72 ntBASIC0.07□□□□□ -2.4
NUBP1P53384 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC0.06□□□□□ -2.4
NUBP1P53384 Y_RNA.134-201ENST00000363435 105 ntBASIC0.05□□□□□ -2.4
NUBP1P53384 MIR4493-201ENST00000584016 73 ntBASIC0.05□□□□□ -2.4
NUBP1P53384 Y_RNA.781-201ENST00000620301 103 ntBASIC0.05□□□□□ -2.4
NUBP1P53384 RNA5SP300-201ENST00000391197 107 ntBASIC0.04□□□□□ -2.4
NUBP1P53384 MIR4645-201ENST00000583158 77 ntBASIC0.04□□□□□ -2.4
NUBP1P53384 AP001180.6-201ENST00000584918 159 ntBASIC0.04□□□□□ -2.4
NUBP1P53384 SNORD18C-201ENST00000362704 69 ntBASIC0.03□□□□□ -2.4
NUBP1P53384 MIR581-201ENST00000384895 96 ntBASIC0.03□□□□□ -2.4
NUBP1P53384 Y_RNA.610-201ENST00000410681 103 ntBASIC0.02□□□□□ -2.41
NUBP1P53384 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC0.02□□□□□ -2.41
NUBP1P53384 SNORD114-11-201ENST00000363738 75 ntBASIC0.01□□□□□ -2.41
NUBP1P53384 Y_RNA.320-201ENST00000365144 102 ntBASIC0.01□□□□□ -2.41
NUBP1P53384 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC0.01□□□□□ -2.41
NUBP1P53384 MIR409-201ENST00000362237 79 ntBASIC-0.02□□□□□ -2.41
NUBP1P53384 RNA5SP26-201ENST00000362406 119 ntBASIC-0.02□□□□□ -2.41
NUBP1P53384 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
NUBP1P53384 RNU6-563P-201ENST00000364872 108 ntBASIC-0.03□□□□□ -2.41
NUBP1P53384 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.04□□□□□ -2.42
NUBP1P53384 MIR4667-201ENST00000578933 66 ntBASIC-0.04□□□□□ -2.42
NUBP1P53384 SNORD95.1-201ENST00000364099 68 ntBASIC-0.06□□□□□ -2.42
NUBP1P53384 RPS29P8-201ENST00000445109 171 ntBASIC-0.06□□□□□ -2.42
NUBP1P53384 RNU6-68P-201ENST00000516576 104 ntBASIC-0.07□□□□□ -2.42
NUBP1P53384 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
NUBP1P53384 AC018880.2-201ENST00000414265 201 ntBASIC-0.08□□□□□ -2.42
NUBP1P53384 MIR101-1-201ENST00000362265 75 ntBASIC-0.09□□□□□ -2.42
NUBP1P53384 RNU6-836P-201ENST00000362920 107 ntBASIC-0.09□□□□□ -2.42
NUBP1P53384 RNU6-695P-201ENST00000391157 104 ntBASIC-0.11□□□□□ -2.43
NUBP1P53384 RNA5SP266-201ENST00000410273 108 ntBASIC-0.11□□□□□ -2.43
NUBP1P53384 RNA5SP451-201ENST00000410588 110 ntBASIC-0.11□□□□□ -2.43
NUBP1P53384 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.15□□□□□ -2.43
NUBP1P53384 SNORD114-28-201ENST00000363610 72 ntBASIC-0.16□□□□□ -2.44
NUBP1P53384 MIR4723-201ENST00000585070 81 ntBASIC-0.16□□□□□ -2.44
NUBP1P53384 MIR147A-201ENST00000385079 72 ntBASIC-0.17□□□□□ -2.44
NUBP1P53384 MIR548AJ2-201ENST00000408539 92 ntBASIC-0.17□□□□□ -2.44
NUBP1P53384 MIR224-201ENST00000384889 81 ntBASIC-0.18□□□□□ -2.44
NUBP1P53384 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
NUBP1P53384 SNX3P1X-201ENST00000414887 175 ntBASIC-0.21□□□□□ -2.44
NUBP1P53384 Y_RNA.260-201ENST00000364628 101 ntBASIC-0.22□□□□□ -2.44
NUBP1P53384 SNORA3B-201ENST00000391305 131 ntBASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms