Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 SNORD22.1-201ENST00000516331 125 ntBASIC0.08□□□□□ -2.4
RXRBP28702 RNU6-608P-201ENST00000383927 104 ntBASIC0.07□□□□□ -2.4
RXRBP28702 RNU6-1250P-201ENST00000391218 107 ntBASIC0.07□□□□□ -2.4
RXRBP28702 SNORD114-16-201ENST00000363044 70 ntBASIC0.06□□□□□ -2.4
RXRBP28702 MIR518B-201ENST00000385127 83 ntBASIC0.06□□□□□ -2.4
RXRBP28702 RPS29P8-201ENST00000445109 171 ntBASIC0.06□□□□□ -2.4
RXRBP28702 Y_RNA.699-201ENST00000516803 93 ntBASIC0.06□□□□□ -2.4
RXRBP28702 MIR5683-201ENST00000636514 76 ntBASIC0.06□□□□□ -2.4
RXRBP28702 SNORD115-33-201ENST00000363723 82 ntBASIC0.05□□□□□ -2.4
RXRBP28702 MIR4645-201ENST00000583158 77 ntBASIC0.05□□□□□ -2.4
RXRBP28702 AC093726.3-201ENST00000637588 150 ntBASIC0.05□□□□□ -2.4
RXRBP28702 RNU6-1204P-201ENST00000363948 107 ntBASIC0.04□□□□□ -2.4
RXRBP28702 RNA5SP169-201ENST00000517268 117 ntBASIC0.04□□□□□ -2.4
RXRBP28702 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
RXRBP28702 AL353691.2-201ENST00000443795 59 ntBASIC0.03□□□□□ -2.4
RXRBP28702 MIR214-201ENST00000385214 110 ntBASIC0.02□□□□□ -2.41
RXRBP28702 SNORD75.1-201ENST00000408373 60 ntBASIC0.02□□□□□ -2.41
RXRBP28702 MIR3681-201ENST00000580089 72 ntBASIC0.02□□□□□ -2.41
RXRBP28702 Y_RNA.189-201ENST00000363959 112 ntBASIC0.01□□□□□ -2.41
RXRBP28702 SNORD114-12-201ENST00000365400 75 ntBASIC0.01□□□□□ -2.41
RXRBP28702 MIR8064-201ENST00000612863 90 ntBASIC0.01□□□□□ -2.41
RXRBP28702 SNORA18.1-201ENST00000363418 128 ntBASIC0□□□□□ -2.41
RXRBP28702 SNORD114-11-201ENST00000363738 75 ntBASIC-0.01□□□□□ -2.41
RXRBP28702 RNU6-1008P-201ENST00000384160 104 ntBASIC-0.01□□□□□ -2.41
RXRBP28702 MIR3666-201ENST00000607845 111 ntBASIC-0.01□□□□□ -2.41
RXRBP28702 SNORD114-17-201ENST00000364699 75 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 RNU6-721P-201ENST00000410155 105 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 MIR3179-1-201ENST00000578940 84 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 MIR3179-2-201ENST00000579107 84 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 MIR3179-3-201ENST00000579566 84 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 MIR3179-4-201ENST00000617599 84 ntBASIC-0.02□□□□□ -2.41
RXRBP28702 RNA5SP451-201ENST00000410588 110 ntBASIC-0.03□□□□□ -2.41
RXRBP28702 RNY3P8-201ENST00000411366 126 ntBASIC-0.03□□□□□ -2.41
RXRBP28702 AP000533.3-201ENST00000447704 118 ntBASIC-0.03□□□□□ -2.41
RXRBP28702 MIR4263-201ENST00000584745 83 ntBASIC-0.03□□□□□ -2.41
RXRBP28702 RNU6-361P-201ENST00000364454 107 ntBASIC-0.04□□□□□ -2.42
RXRBP28702 SNORA32.1-201ENST00000364514 115 ntBASIC-0.04□□□□□ -2.42
RXRBP28702 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
RXRBP28702 MIR548AX-201ENST00000580117 73 ntBASIC-0.04□□□□□ -2.42
RXRBP28702 RNU6-822P-201ENST00000362707 106 ntBASIC-0.05□□□□□ -2.42
RXRBP28702 RNY1P9-201ENST00000532431 109 ntBASIC-0.05□□□□□ -2.42
RXRBP28702 MIR4426-201ENST00000640330 63 ntBASIC-0.05□□□□□ -2.42
RXRBP28702 SNORD114-28-201ENST00000363610 72 ntBASIC-0.06□□□□□ -2.42
RXRBP28702 RNU6-59P-201ENST00000384787 107 ntBASIC-0.06□□□□□ -2.42
RXRBP28702 MIR224-201ENST00000384889 81 ntBASIC-0.06□□□□□ -2.42
RXRBP28702 RNA5SP300-201ENST00000391197 107 ntBASIC-0.06□□□□□ -2.42
RXRBP28702 MIR4788-201ENST00000639104 80 ntBASIC-0.06□□□□□ -2.42
RXRBP28702 SNORD4A-201ENST00000459174 72 ntBASIC-0.07□□□□□ -2.42
RXRBP28702 RNU4-63P-201ENST00000411313 118 ntBASIC-0.08□□□□□ -2.42
RXRBP28702 SNORA13-201ENST00000458790 133 ntBASIC-0.08□□□□□ -2.42
RXRBP28702 MIR202-201ENST00000362219 110 ntBASIC-0.09□□□□□ -2.42
RXRBP28702 RPL35AP4-201ENST00000412007 102 ntBASIC-0.09□□□□□ -2.42
RXRBP28702 MIR204-201ENST00000385200 110 ntBASIC-0.1□□□□□ -2.43
RXRBP28702 RNU6-1047P-201ENST00000364418 107 ntBASIC-0.14□□□□□ -2.43
RXRBP28702 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.14□□□□□ -2.43
RXRBP28702 SNORA17.4-201ENST00000391287 132 ntBASIC-0.14□□□□□ -2.43
RXRBP28702 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.14□□□□□ -2.43
RXRBP28702 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.15□□□□□ -2.43
RXRBP28702 MIR507-201ENST00000385234 94 ntBASIC-0.15□□□□□ -2.43
RXRBP28702 RNU6-1326P-201ENST00000391262 107 ntBASIC-0.15□□□□□ -2.43
RXRBP28702 RNU6-724P-201ENST00000390958 105 ntBASIC-0.16□□□□□ -2.44
RXRBP28702 RNA5SP26-201ENST00000362406 119 ntBASIC-0.17□□□□□ -2.44
RXRBP28702 RNA5SP275-201ENST00000363936 118 ntBASIC-0.17□□□□□ -2.44
RXRBP28702 RNU6-320P-201ENST00000516511 106 ntBASIC-0.17□□□□□ -2.44
RXRBP28702 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.17□□□□□ -2.44
RXRBP28702 Y_RNA.345-201ENST00000365384 92 ntBASIC-0.18□□□□□ -2.44
RXRBP28702 RNU6-300P-201ENST00000459080 104 ntBASIC-0.18□□□□□ -2.44
RXRBP28702 U4.2-201ENST00000618561 85 ntBASIC-0.18□□□□□ -2.44
RXRBP28702 MIR4317-201ENST00000637586 65 ntBASIC-0.18□□□□□ -2.44
RXRBP28702 SNORA32.3-201ENST00000384772 121 ntBASIC-0.19□□□□□ -2.44
RXRBP28702 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.19□□□□□ -2.44
RXRBP28702 AC090616.4-201ENST00000448026 115 ntBASIC-0.19□□□□□ -2.44
RXRBP28702 MIR601-201ENST00000385256 79 ntBASIC-0.2□□□□□ -2.44
RXRBP28702 MIR548AZ-201ENST00000616567 95 ntBASIC-0.2□□□□□ -2.44
RXRBP28702 AC013734.1-201ENST00000619329 111 ntBASIC-0.2□□□□□ -2.44
RXRBP28702 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.21□□□□□ -2.44
RXRBP28702 MIR548N-201ENST00000408742 75 ntBASIC-0.21□□□□□ -2.44
RXRBP28702 MIR4320-201ENST00000636981 65 ntBASIC-0.22□□□□□ -2.44
RXRBP28702 U6.103-201ENST00000637085 61 ntBASIC-0.22□□□□□ -2.44
RXRBP28702 MIR581-201ENST00000384895 96 ntBASIC-0.23□□□□□ -2.45
RXRBP28702 RNA5SP461-201ENST00000516451 104 ntBASIC-0.23□□□□□ -2.45
RXRBP28702 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.23□□□□□ -2.45
RXRBP28702 SNORD14C-201ENST00000365382 88 ntBASIC-0.24□□□□□ -2.45
RXRBP28702 MT-TQ-201ENST00000387372 72 ntBASIC-0.24□□□□□ -2.45
RXRBP28702 Y_RNA.206-201ENST00000364136 102 ntBASIC-0.25□□□□□ -2.45
RXRBP28702 RNU6-431P-201ENST00000383874 107 ntBASIC-0.25□□□□□ -2.45
RXRBP28702 MIR587-201ENST00000384845 96 ntBASIC-0.25□□□□□ -2.45
RXRBP28702 RNU6-563P-201ENST00000364872 108 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 SNORD60-201ENST00000383903 83 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 MIR147A-201ENST00000385079 72 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 MIR196A2-201ENST00000385189 110 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 SNORD126-201ENST00000459475 77 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 AC021146.6-201ENST00000514659 117 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 MIR4324-201ENST00000584846 72 ntBASIC-0.26□□□□□ -2.45
RXRBP28702 RNU6-10P-201ENST00000384036 107 ntBASIC-0.27□□□□□ -2.45
RXRBP28702 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.27□□□□□ -2.45
RXRBP28702 RNU6-176P-201ENST00000517196 105 ntBASIC-0.27□□□□□ -2.45
RXRBP28702 MIR23C-201ENST00000579846 100 ntBASIC-0.27□□□□□ -2.45
RXRBP28702 MIR6738-201ENST00000619620 64 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms