Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 U2.18-201ENST00000622185 84 ntBASIC-1.5□□□□□ -2.65
ABCD3P28288 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 RNA5SP173-201ENST00000364857 136 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 RNU6-841P-201ENST00000383872 107 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 SNORD45A-201ENST00000384512 84 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 RNU6-696P-201ENST00000390834 107 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.51□□□□□ -2.65
ABCD3P28288 MIR548V-201ENST00000584165 80 ntBASIC-1.52□□□□□ -2.65
ABCD3P28288 AC013734.1-201ENST00000619329 111 ntBASIC-1.52□□□□□ -2.65
ABCD3P28288 MIR664A-201ENST00000626086 82 ntBASIC-1.52□□□□□ -2.65
ABCD3P28288 RNY4P27-201ENST00000363341 96 ntBASIC-1.53□□□□□ -2.65
ABCD3P28288 RNU6-70P-201ENST00000516438 60 ntBASIC-1.53□□□□□ -2.65
ABCD3P28288 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.54□□□□□ -2.66
ABCD3P28288 MIR154-201ENST00000385243 84 ntBASIC-1.54□□□□□ -2.66
ABCD3P28288 SNORD113-2-201ENST00000391082 72 ntBASIC-1.54□□□□□ -2.66
ABCD3P28288 U4.4-201ENST00000620626 117 ntBASIC-1.54□□□□□ -2.66
ABCD3P28288 RNA5SP405-201ENST00000363059 114 ntBASIC-1.55□□□□□ -2.66
ABCD3P28288 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.55□□□□□ -2.66
ABCD3P28288 MIR548W-201ENST00000581970 74 ntBASIC-1.55□□□□□ -2.66
ABCD3P28288 MIR3170-201ENST00000582699 77 ntBASIC-1.55□□□□□ -2.66
ABCD3P28288 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.56□□□□□ -2.66
ABCD3P28288 RNU6-118P-201ENST00000516552 102 ntBASIC-1.56□□□□□ -2.66
ABCD3P28288 MIR3139-201ENST00000579145 76 ntBASIC-1.56□□□□□ -2.66
ABCD3P28288 AC005520.4-201ENST00000604337 90 ntBASIC-1.56□□□□□ -2.66
ABCD3P28288 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.57□□□□□ -2.66
ABCD3P28288 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.57□□□□□ -2.66
ABCD3P28288 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.58□□□□□ -2.66
ABCD3P28288 RNU6-895P-201ENST00000384125 103 ntBASIC-1.58□□□□□ -2.66
ABCD3P28288 snoU13.10-201ENST00000459301 103 ntBASIC-1.58□□□□□ -2.66
ABCD3P28288 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.59□□□□□ -2.66
ABCD3P28288 RNU6-194P-201ENST00000363862 105 ntBASIC-1.6□□□□□ -2.67
ABCD3P28288 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.6□□□□□ -2.67
ABCD3P28288 MIR630-201ENST00000384957 97 ntBASIC-1.6□□□□□ -2.67
ABCD3P28288 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.6□□□□□ -2.67
ABCD3P28288 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.6□□□□□ -2.67
ABCD3P28288 U6.97-201ENST00000636904 101 ntBASIC-1.6□□□□□ -2.67
ABCD3P28288 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.61□□□□□ -2.67
ABCD3P28288 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.61□□□□□ -2.67
ABCD3P28288 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.61□□□□□ -2.67
ABCD3P28288 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.62□□□□□ -2.67
ABCD3P28288 MIR23C-201ENST00000579846 100 ntBASIC-1.62□□□□□ -2.67
ABCD3P28288 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.63□□□□□ -2.67
ABCD3P28288 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.63□□□□□ -2.67
ABCD3P28288 RNU6-974P-201ENST00000384099 108 ntBASIC-1.64□□□□□ -2.67
ABCD3P28288 RNA5SP170-201ENST00000517150 101 ntBASIC-1.64□□□□□ -2.67
ABCD3P28288 AC062037.1-201ENST00000605302 128 ntBASIC-1.64□□□□□ -2.67
ABCD3P28288 MIR581-201ENST00000384895 96 ntBASIC-1.65□□□□□ -2.67
ABCD3P28288 MT-TM-201ENST00000387377 68 ntBASIC-1.65□□□□□ -2.67
ABCD3P28288 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.65□□□□□ -2.67
ABCD3P28288 RNY3P8-201ENST00000411366 126 ntBASIC-1.65□□□□□ -2.67
ABCD3P28288 SNORD116-16-201ENST00000384533 92 ntBASIC-1.66□□□□□ -2.68
ABCD3P28288 RNU6-787P-201ENST00000384032 107 ntBASIC-1.67□□□□□ -2.68
ABCD3P28288 SNORA41B-201ENST00000384785 128 ntBASIC-1.67□□□□□ -2.68
ABCD3P28288 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.67□□□□□ -2.68
ABCD3P28288 MIR3134-201ENST00000579433 74 ntBASIC-1.67□□□□□ -2.68
ABCD3P28288 SNORD1B-201ENST00000363091 84 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 RNU6-411P-201ENST00000384451 107 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 MIR548AA1-201ENST00000384971 97 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 MIR496-201ENST00000385226 102 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 MIR4748-201ENST00000578076 82 ntBASIC-1.68□□□□□ -2.68
ABCD3P28288 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.69□□□□□ -2.68
ABCD3P28288 RNU6-669P-201ENST00000365575 107 ntBASIC-1.69□□□□□ -2.68
ABCD3P28288 MIR579-201ENST00000385221 98 ntBASIC-1.69□□□□□ -2.68
ABCD3P28288 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.69□□□□□ -2.68
ABCD3P28288 U7.4-201ENST00000614961 63 ntBASIC-1.69□□□□□ -2.68
ABCD3P28288 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.69□□□□□ -2.68
ABCD3P28288 SNORD116-24-201ENST00000384549 92 ntBASIC-1.7□□□□□ -2.68
ABCD3P28288 RNU6-687P-201ENST00000516443 89 ntBASIC-1.7□□□□□ -2.68
ABCD3P28288 RNU7-151P-201ENST00000516930 53 ntBASIC-1.7□□□□□ -2.68
ABCD3P28288 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.7□□□□□ -2.68
ABCD3P28288 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.7□□□□□ -2.68
ABCD3P28288 MIR3202-2-201ENST00000635980 79 ntBASIC-1.7□□□□□ -2.68
ABCD3P28288 RNU6-247P-201ENST00000362636 107 ntBASIC-1.71□□□□□ -2.68
ABCD3P28288 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.71□□□□□ -2.68
ABCD3P28288 SNORD63.2-201ENST00000516303 64 ntBASIC-1.71□□□□□ -2.68
ABCD3P28288 MIR7978-201ENST00000636158 59 ntBASIC-1.71□□□□□ -2.68
ABCD3P28288 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.72□□□□□ -2.68
ABCD3P28288 MIR466-201ENST00000580653 84 ntBASIC-1.72□□□□□ -2.68
ABCD3P28288 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.73□□□□□ -2.69
ABCD3P28288 SNORA27.2-201ENST00000363365 126 ntBASIC-1.73□□□□□ -2.69
ABCD3P28288 RNU6-995P-201ENST00000391244 107 ntBASIC-1.73□□□□□ -2.69
ABCD3P28288 FTX_4.1-201ENST00000616291 147 ntBASIC-1.74□□□□□ -2.69
ABCD3P28288 AC097484.2-201ENST00000509147 251 ntBASIC-1.75□□□□□ -2.69
ABCD3P28288 RNU6-523P-201ENST00000516304 54 ntBASIC-1.75□□□□□ -2.69
ABCD3P28288 RNU6-542P-201ENST00000516405 103 ntBASIC-1.75□□□□□ -2.69
ABCD3P28288 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.77□□□□□ -2.69
ABCD3P28288 MIR125B1-201ENST00000385236 88 ntBASIC-1.77□□□□□ -2.69
ABCD3P28288 RNU6-141P-201ENST00000410499 105 ntBASIC-1.77□□□□□ -2.69
ABCD3P28288 SNORD73B-201ENST00000364394 72 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.78□□□□□ -2.69
ABCD3P28288 SNORD113-3-201ENST00000364830 72 ntBASIC-1.79□□□□□ -2.7
ABCD3P28288 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms