Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.53□□□□□ -2.65
RAB40ALP0C0E4 RNU6-820P-201ENST00000384273 107 ntBASIC-1.53□□□□□ -2.65
RAB40ALP0C0E4 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.53□□□□□ -2.65
RAB40ALP0C0E4 MIR3170-201ENST00000582699 77 ntBASIC-1.53□□□□□ -2.65
RAB40ALP0C0E4 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 SNORD115-31-201ENST00000365318 82 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 RNU4-88P-201ENST00000411220 86 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 AC005520.4-201ENST00000604337 90 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 AC013734.1-201ENST00000619329 111 ntBASIC-1.54□□□□□ -2.66
RAB40ALP0C0E4 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.55□□□□□ -2.66
RAB40ALP0C0E4 MIR548W-201ENST00000581970 74 ntBASIC-1.55□□□□□ -2.66
RAB40ALP0C0E4 RNU6-980P-201ENST00000516925 103 ntBASIC-1.56□□□□□ -2.66
RAB40ALP0C0E4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.56□□□□□ -2.66
RAB40ALP0C0E4 U4.2-201ENST00000618561 85 ntBASIC-1.56□□□□□ -2.66
RAB40ALP0C0E4 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.56□□□□□ -2.66
RAB40ALP0C0E4 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.57□□□□□ -2.66
RAB40ALP0C0E4 MIR3134-201ENST00000579433 74 ntBASIC-1.58□□□□□ -2.66
RAB40ALP0C0E4 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.58□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.58□□□□□ -2.66
RAB40ALP0C0E4 RNA5SP405-201ENST00000363059 114 ntBASIC-1.59□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.59□□□□□ -2.66
RAB40ALP0C0E4 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.6□□□□□ -2.67
RAB40ALP0C0E4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.6□□□□□ -2.67
RAB40ALP0C0E4 MIR4723-201ENST00000585070 81 ntBASIC-1.6□□□□□ -2.67
RAB40ALP0C0E4 AC062037.1-201ENST00000605302 128 ntBASIC-1.6□□□□□ -2.67
RAB40ALP0C0E4 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.61□□□□□ -2.67
RAB40ALP0C0E4 SNORA41B-201ENST00000384785 128 ntBASIC-1.61□□□□□ -2.67
RAB40ALP0C0E4 MIR23C-201ENST00000579846 100 ntBASIC-1.61□□□□□ -2.67
RAB40ALP0C0E4 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.61□□□□□ -2.67
RAB40ALP0C0E4 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-1.61□□□□□ -2.67
RAB40ALP0C0E4 SNORD114-3-201ENST00000364969 75 ntBASIC-1.62□□□□□ -2.67
RAB40ALP0C0E4 SNORD116-24-201ENST00000384549 92 ntBASIC-1.62□□□□□ -2.67
RAB40ALP0C0E4 MIR581-201ENST00000384895 96 ntBASIC-1.62□□□□□ -2.67
RAB40ALP0C0E4 snoU13.10-201ENST00000459301 103 ntBASIC-1.62□□□□□ -2.67
RAB40ALP0C0E4 SNORD1B-201ENST00000363091 84 ntBASIC-1.63□□□□□ -2.67
RAB40ALP0C0E4 RNY4P27-201ENST00000363341 96 ntBASIC-1.63□□□□□ -2.67
RAB40ALP0C0E4 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.63□□□□□ -2.67
RAB40ALP0C0E4 RNU6-787P-201ENST00000384032 107 ntBASIC-1.63□□□□□ -2.67
RAB40ALP0C0E4 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.63□□□□□ -2.67
RAB40ALP0C0E4 RNU6-1034P-201ENST00000365335 101 ntBASIC-1.64□□□□□ -2.67
RAB40ALP0C0E4 RNU6-974P-201ENST00000384099 108 ntBASIC-1.64□□□□□ -2.67
RAB40ALP0C0E4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.64□□□□□ -2.67
RAB40ALP0C0E4 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.64□□□□□ -2.67
RAB40ALP0C0E4 RNU6-411P-201ENST00000384451 107 ntBASIC-1.65□□□□□ -2.67
RAB40ALP0C0E4 RNU6-687P-201ENST00000516443 89 ntBASIC-1.65□□□□□ -2.67
RAB40ALP0C0E4 RNA5SP170-201ENST00000517150 101 ntBASIC-1.65□□□□□ -2.67
RAB40ALP0C0E4 MIR3139-201ENST00000579145 76 ntBASIC-1.65□□□□□ -2.67
RAB40ALP0C0E4 MIR7978-201ENST00000636158 59 ntBASIC-1.65□□□□□ -2.67
RAB40ALP0C0E4 RNY3P8-201ENST00000411366 126 ntBASIC-1.66□□□□□ -2.68
RAB40ALP0C0E4 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.66□□□□□ -2.68
RAB40ALP0C0E4 U7.4-201ENST00000614961 63 ntBASIC-1.66□□□□□ -2.68
RAB40ALP0C0E4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.67□□□□□ -2.68
RAB40ALP0C0E4 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.67□□□□□ -2.68
RAB40ALP0C0E4 RNU6-118P-201ENST00000516552 102 ntBASIC-1.67□□□□□ -2.68
RAB40ALP0C0E4 RNU6-669P-201ENST00000365575 107 ntBASIC-1.68□□□□□ -2.68
RAB40ALP0C0E4 MIR125B1-201ENST00000385236 88 ntBASIC-1.68□□□□□ -2.68
RAB40ALP0C0E4 RNU7-151P-201ENST00000516930 53 ntBASIC-1.69□□□□□ -2.68
RAB40ALP0C0E4 MIR4748-201ENST00000578076 82 ntBASIC-1.69□□□□□ -2.68
RAB40ALP0C0E4 U6.97-201ENST00000636904 101 ntBASIC-1.69□□□□□ -2.68
RAB40ALP0C0E4 RNU6-523P-201ENST00000516304 54 ntBASIC-1.7□□□□□ -2.68
RAB40ALP0C0E4 RNU6-542P-201ENST00000516405 103 ntBASIC-1.7□□□□□ -2.68
RAB40ALP0C0E4 SNORA27.2-201ENST00000363365 126 ntBASIC-1.71□□□□□ -2.68
RAB40ALP0C0E4 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.71□□□□□ -2.68
RAB40ALP0C0E4 MIR3202-2-201ENST00000635980 79 ntBASIC-1.71□□□□□ -2.68
RAB40ALP0C0E4 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.72□□□□□ -2.68
RAB40ALP0C0E4 RNU6-194P-201ENST00000363862 105 ntBASIC-1.72□□□□□ -2.68
RAB40ALP0C0E4 RNU6-995P-201ENST00000391244 107 ntBASIC-1.72□□□□□ -2.68
RAB40ALP0C0E4 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.72□□□□□ -2.68
RAB40ALP0C0E4 MIR579-201ENST00000385221 98 ntBASIC-1.73□□□□□ -2.69
RAB40ALP0C0E4 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.73□□□□□ -2.69
RAB40ALP0C0E4 SNORD63.2-201ENST00000516303 64 ntBASIC-1.73□□□□□ -2.69
RAB40ALP0C0E4 SNORD73B-201ENST00000364394 72 ntBASIC-1.74□□□□□ -2.69
RAB40ALP0C0E4 MT-TM-201ENST00000387377 68 ntBASIC-1.75□□□□□ -2.69
RAB40ALP0C0E4 RNU6-247P-201ENST00000362636 107 ntBASIC-1.76□□□□□ -2.69
RAB40ALP0C0E4 RNU6-68P-201ENST00000516576 104 ntBASIC-1.76□□□□□ -2.69
RAB40ALP0C0E4 MIR496-201ENST00000385226 102 ntBASIC-1.77□□□□□ -2.69
RAB40ALP0C0E4 RNU6-634P-201ENST00000459134 106 ntBASIC-1.77□□□□□ -2.69
RAB40ALP0C0E4 RNU6-92P-201ENST00000605893 104 ntBASIC-1.77□□□□□ -2.69
RAB40ALP0C0E4 MIRLET7A2-201ENST00000362105 72 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 Y_RNA.139-201ENST00000363464 102 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 RNU6-119P-201ENST00000364882 107 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 SNORA26.2-201ENST00000390922 122 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 RNU6-172P-201ENST00000411000 93 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 AC097484.2-201ENST00000509147 251 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 VTRNA2-1-201ENST00000602301 127 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 FTX_4.1-201ENST00000616291 147 ntBASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 TARS-215ENST00000626210 201 ntTSL 5 BASIC-1.78□□□□□ -2.69
RAB40ALP0C0E4 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.79□□□□□ -2.7
RAB40ALP0C0E4 MIR1207-201ENST00000408249 87 ntBASIC-1.79□□□□□ -2.7
RAB40ALP0C0E4 SNORD18C-201ENST00000362704 69 ntBASIC-1.8□□□□□ -2.7
RAB40ALP0C0E4 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.8□□□□□ -2.7
RAB40ALP0C0E4 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.8□□□□□ -2.7
RAB40ALP0C0E4 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.8□□□□□ -2.7
RAB40ALP0C0E4 RNU6-663P-201ENST00000391105 106 ntBASIC-1.8□□□□□ -2.7
RAB40ALP0C0E4 MIR548N-201ENST00000408742 75 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 218.5 ms