Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNA5SP26-201ENST00000362406 119 ntBASIC0.74□□□□□ -2.29
GFRA3O60609 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC0.74□□□□□ -2.29
GFRA3O60609 MIR518B-201ENST00000385127 83 ntBASIC0.73□□□□□ -2.29
GFRA3O60609 RNA5SP63-201ENST00000391225 112 ntBASIC0.73□□□□□ -2.29
GFRA3O60609 RNU6-284P-201ENST00000411105 106 ntBASIC0.73□□□□□ -2.29
GFRA3O60609 PSMC1P5-201ENST00000512850 177 ntBASIC0.72□□□□□ -2.29
GFRA3O60609 SNORA68.3-201ENST00000515906 83 ntBASIC0.72□□□□□ -2.29
GFRA3O60609 MIR6759-201ENST00000638110 65 ntBASIC0.72□□□□□ -2.29
GFRA3O60609 AC090625.1-201ENST00000357130 210 ntBASIC0.71□□□□□ -2.3
GFRA3O60609 RNA5SP331-201ENST00000364986 107 ntBASIC0.71□□□□□ -2.3
GFRA3O60609 RNU6-620P-201ENST00000384017 96 ntBASIC0.71□□□□□ -2.3
GFRA3O60609 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.71□□□□□ -2.3
GFRA3O60609 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
GFRA3O60609 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
GFRA3O60609 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
GFRA3O60609 MIR4514-201ENST00000581410 57 ntBASIC0.7□□□□□ -2.3
GFRA3O60609 RNU6-30P-201ENST00000384561 107 ntBASIC0.69□□□□□ -2.3
GFRA3O60609 RNU6-1024P-201ENST00000384199 107 ntBASIC0.68□□□□□ -2.3
GFRA3O60609 SNORD75.1-201ENST00000408373 60 ntBASIC0.68□□□□□ -2.3
GFRA3O60609 AC069113.3-201ENST00000521019 150 ntBASIC0.68□□□□□ -2.3
GFRA3O60609 MIR5589-201ENST00000579442 60 ntBASIC0.68□□□□□ -2.3
GFRA3O60609 Y_RNA.434-201ENST00000384090 100 ntBASIC0.67□□□□□ -2.3
GFRA3O60609 RNU6-1324P-201ENST00000384222 107 ntBASIC0.67□□□□□ -2.3
GFRA3O60609 MIR1254-1-201ENST00000408257 97 ntBASIC0.67□□□□□ -2.3
GFRA3O60609 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
GFRA3O60609 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
GFRA3O60609 MIRLET7D-201ENST00000362263 87 ntBASIC0.66□□□□□ -2.3
GFRA3O60609 Y_RNA.189-201ENST00000363959 112 ntBASIC0.66□□□□□ -2.3
GFRA3O60609 RNU7-165P-201ENST00000458864 60 ntBASIC0.66□□□□□ -2.3
GFRA3O60609 RNU6-345P-201ENST00000517001 107 ntBASIC0.66□□□□□ -2.3
GFRA3O60609 MIR146A-201ENST00000385201 99 ntBASIC0.65□□□□□ -2.31
GFRA3O60609 MIR4645-201ENST00000583158 77 ntBASIC0.65□□□□□ -2.31
GFRA3O60609 RNU6-1340P-201ENST00000384438 107 ntBASIC0.64□□□□□ -2.31
GFRA3O60609 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
GFRA3O60609 AP000533.3-201ENST00000447704 118 ntBASIC0.64□□□□□ -2.31
GFRA3O60609 MIR593-201ENST00000384856 100 ntBASIC0.63□□□□□ -2.31
GFRA3O60609 MIR4802-201ENST00000581881 80 ntBASIC0.63□□□□□ -2.31
GFRA3O60609 RNA5SP499-201ENST00000363982 119 ntBASIC0.62□□□□□ -2.31
GFRA3O60609 AC023932.2-201ENST00000603176 175 ntBASIC0.62□□□□□ -2.31
GFRA3O60609 AL590491.3-201ENST00000610731 82 ntBASIC0.6□□□□□ -2.31
GFRA3O60609 RNU6-79P-201ENST00000362511 107 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 RNA5SP66-201ENST00000517178 101 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 MIR3179-1-201ENST00000578940 84 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 MIR3179-2-201ENST00000579107 84 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 MIR3179-3-201ENST00000579566 84 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 MIR3179-4-201ENST00000617599 84 ntBASIC0.59□□□□□ -2.31
GFRA3O60609 SNORA32.1-201ENST00000364514 115 ntBASIC0.58□□□□□ -2.32
GFRA3O60609 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
GFRA3O60609 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.58□□□□□ -2.32
GFRA3O60609 MIR4743-201ENST00000584576 69 ntBASIC0.58□□□□□ -2.32
GFRA3O60609 RNA5SP25-201ENST00000410815 110 ntBASIC0.57□□□□□ -2.32
GFRA3O60609 AL500527.2-201ENST00000454105 95 ntBASIC0.57□□□□□ -2.32
GFRA3O60609 SNORA13-201ENST00000458790 133 ntBASIC0.57□□□□□ -2.32
GFRA3O60609 MIR145-201ENST00000384967 88 ntBASIC0.56□□□□□ -2.32
GFRA3O60609 Z95118.1-201ENST00000421372 247 ntBASIC0.56□□□□□ -2.32
GFRA3O60609 SNORD49B-201ENST00000365172 72 ntBASIC0.55□□□□□ -2.32
GFRA3O60609 MIR610-201ENST00000385139 96 ntBASIC0.55□□□□□ -2.32
GFRA3O60609 RNU7-159P-201ENST00000459284 62 ntBASIC0.55□□□□□ -2.32
GFRA3O60609 AC093726.3-201ENST00000637588 150 ntBASIC0.55□□□□□ -2.32
GFRA3O60609 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.54□□□□□ -2.32
GFRA3O60609 AC018880.2-201ENST00000414265 201 ntBASIC0.54□□□□□ -2.32
GFRA3O60609 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
GFRA3O60609 RNU6-1043P-201ENST00000410355 99 ntBASIC0.53□□□□□ -2.32
GFRA3O60609 Y_RNA.59-201ENST00000362828 102 ntBASIC0.51□□□□□ -2.33
GFRA3O60609 RNU6-854P-201ENST00000364036 107 ntBASIC0.51□□□□□ -2.33
GFRA3O60609 SNORD19B.1-201ENST00000630615 80 ntBASIC0.51□□□□□ -2.33
GFRA3O60609 SNORD114-15-201ENST00000364687 72 ntBASIC0.5□□□□□ -2.33
GFRA3O60609 RNU6-46P-201ENST00000383860 107 ntBASIC0.5□□□□□ -2.33
GFRA3O60609 MIR4315-1-201ENST00000636800 73 ntBASIC0.5□□□□□ -2.33
GFRA3O60609 MIR4315-2-201ENST00000640925 73 ntBASIC0.5□□□□□ -2.33
GFRA3O60609 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
GFRA3O60609 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
GFRA3O60609 Y_RNA.349-201ENST00000365406 102 ntBASIC0.48□□□□□ -2.33
GFRA3O60609 MIR92A1-201ENST00000385233 78 ntBASIC0.48□□□□□ -2.33
GFRA3O60609 RNU6-758P-201ENST00000516292 89 ntBASIC0.48□□□□□ -2.33
GFRA3O60609 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.48□□□□□ -2.33
GFRA3O60609 Y_RNA.185-201ENST00000363894 100 ntBASIC0.47□□□□□ -2.33
GFRA3O60609 RNA5SP368-201ENST00000364298 116 ntBASIC0.47□□□□□ -2.33
GFRA3O60609 RNU6-1327P-201ENST00000365302 105 ntBASIC0.47□□□□□ -2.33
GFRA3O60609 MIR548H1-201ENST00000408610 102 ntBASIC0.47□□□□□ -2.33
GFRA3O60609 RNA5SP214-201ENST00000363378 118 ntBASIC0.46□□□□□ -2.34
GFRA3O60609 MIR204-201ENST00000385200 110 ntBASIC0.46□□□□□ -2.34
GFRA3O60609 MIR409-201ENST00000362237 79 ntBASIC0.45□□□□□ -2.34
GFRA3O60609 MIR4263-201ENST00000584745 83 ntBASIC0.44□□□□□ -2.34
GFRA3O60609 SNORD113-3-201ENST00000364830 72 ntBASIC0.43□□□□□ -2.34
GFRA3O60609 IGLVI-20-201ENST00000519296 130 ntBASIC0.43□□□□□ -2.34
GFRA3O60609 MIR6818-201ENST00000621576 65 ntBASIC0.43□□□□□ -2.34
GFRA3O60609 SNORD114-9-201ENST00000364370 72 ntBASIC0.41□□□□□ -2.34
GFRA3O60609 MIR6718-201ENST00000616153 80 ntBASIC0.41□□□□□ -2.34
GFRA3O60609 SNORD114-5-201ENST00000362928 70 ntBASIC0.4□□□□□ -2.35
GFRA3O60609 RNU6-164P-201ENST00000364604 103 ntBASIC0.4□□□□□ -2.35
GFRA3O60609 MIR5190-201ENST00000581537 80 ntBASIC0.4□□□□□ -2.35
GFRA3O60609 MIR4723-201ENST00000585070 81 ntBASIC0.4□□□□□ -2.35
GFRA3O60609 RNA5SP266-201ENST00000410273 108 ntBASIC0.39□□□□□ -2.35
GFRA3O60609 RNU6-431P-201ENST00000383874 107 ntBASIC0.38□□□□□ -2.35
GFRA3O60609 MIR147A-201ENST00000385079 72 ntBASIC0.38□□□□□ -2.35
GFRA3O60609 RNU6-422P-201ENST00000384632 107 ntBASIC0.37□□□□□ -2.35
GFRA3O60609 RNU6-1034P-201ENST00000365335 101 ntBASIC0.36□□□□□ -2.35
GFRA3O60609 Y_RNA.63-201ENST00000362841 102 ntBASIC0.35□□□□□ -2.35
GFRA3O60609 Y_RNA.449-201ENST00000384187 102 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms