Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 MIR193B-201ENST00000384907 83 ntBASIC1.33□□□□□ -2.2
MSH5O43196 SNORD114-21-201ENST00000606412 72 ntBASIC1.33□□□□□ -2.2
MSH5O43196 Y_RNA.178-201ENST00000363832 102 ntBASIC1.32□□□□□ -2.2
MSH5O43196 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
MSH5O43196 RNA5SP66-201ENST00000517178 101 ntBASIC1.32□□□□□ -2.2
MSH5O43196 PSMC1P5-201ENST00000512850 177 ntBASIC1.3□□□□□ -2.2
MSH5O43196 MIR1273G-201ENST00000577677 100 ntBASIC1.3□□□□□ -2.2
MSH5O43196 AC093726.3-201ENST00000637588 150 ntBASIC1.3□□□□□ -2.2
MSH5O43196 RNA5SP62-201ENST00000363457 110 ntBASIC1.29□□□□□ -2.2
MSH5O43196 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
MSH5O43196 SNORA62.5-201ENST00000516634 120 ntBASIC1.28□□□□□ -2.2
MSH5O43196 MIR4698-201ENST00000577795 80 ntBASIC1.28□□□□□ -2.2
MSH5O43196 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.27□□□□□ -2.21
MSH5O43196 AC069113.3-201ENST00000521019 150 ntBASIC1.26□□□□□ -2.21
MSH5O43196 RNU4-38P-201ENST00000364472 129 ntBASIC1.25□□□□□ -2.21
MSH5O43196 MIR6857-201ENST00000613267 93 ntBASIC1.25□□□□□ -2.21
MSH5O43196 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
MSH5O43196 RNU6-1034P-201ENST00000365335 101 ntBASIC1.24□□□□□ -2.21
MSH5O43196 RNU7-165P-201ENST00000458864 60 ntBASIC1.24□□□□□ -2.21
MSH5O43196 MIR4714-201ENST00000580728 77 ntBASIC1.24□□□□□ -2.21
MSH5O43196 MIR532-201ENST00000385025 91 ntBASIC1.23□□□□□ -2.21
MSH5O43196 MIR204-201ENST00000385200 110 ntBASIC1.23□□□□□ -2.21
MSH5O43196 Y_RNA.115-201ENST00000363272 98 ntBASIC1.22□□□□□ -2.21
MSH5O43196 SNORD49B-201ENST00000365172 72 ntBASIC1.22□□□□□ -2.21
MSH5O43196 RNU7-159P-201ENST00000459284 62 ntBASIC1.22□□□□□ -2.21
MSH5O43196 RPL39P28-201ENST00000465655 155 ntBASIC1.22□□□□□ -2.21
MSH5O43196 MIR4263-201ENST00000584745 83 ntBASIC1.21□□□□□ -2.22
MSH5O43196 RNA5SP457-201ENST00000363657 124 ntBASIC1.18□□□□□ -2.22
MSH5O43196 MIRLET7D-201ENST00000362263 87 ntBASIC1.17□□□□□ -2.22
MSH5O43196 MIR610-201ENST00000385139 96 ntBASIC1.17□□□□□ -2.22
MSH5O43196 RNU6-983P-201ENST00000516004 103 ntBASIC1.17□□□□□ -2.22
MSH5O43196 snoU13.10-201ENST00000459301 103 ntBASIC1.16□□□□□ -2.22
MSH5O43196 MIR6513-201ENST00000621188 64 ntBASIC1.16□□□□□ -2.22
MSH5O43196 Y_RNA.68-201ENST00000362881 102 ntBASIC1.15□□□□□ -2.23
MSH5O43196 SNORD114-23-201ENST00000363536 72 ntBASIC1.15□□□□□ -2.23
MSH5O43196 AL590491.3-201ENST00000610731 82 ntBASIC1.15□□□□□ -2.23
MSH5O43196 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC1.14□□□□□ -2.23
MSH5O43196 MIR145-201ENST00000384967 88 ntBASIC1.12□□□□□ -2.23
MSH5O43196 RNA5SP330-201ENST00000517096 96 ntBASIC1.12□□□□□ -2.23
MSH5O43196 MIR924-201ENST00000638017 53 ntBASIC1.12□□□□□ -2.23
MSH5O43196 MIR936-201ENST00000401264 98 ntBASIC1.11□□□□□ -2.23
MSH5O43196 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.11□□□□□ -2.23
MSH5O43196 MIR548W-201ENST00000581970 74 ntBASIC1.09□□□□□ -2.23
MSH5O43196 AC010487.4-201ENST00000637027 61 ntBASIC1.09□□□□□ -2.23
MSH5O43196 RNU6-164P-201ENST00000364604 103 ntBASIC1.08□□□□□ -2.24
MSH5O43196 MIR6835-201ENST00000621552 64 ntBASIC1.08□□□□□ -2.24
MSH5O43196 MIR6818-201ENST00000621576 65 ntBASIC1.08□□□□□ -2.24
MSH5O43196 MIR508-201ENST00000384857 115 ntBASIC1.06□□□□□ -2.24
MSH5O43196 snoU83B.1-201ENST00000517136 88 ntBASIC1.05□□□□□ -2.24
MSH5O43196 MIR4743-201ENST00000584576 69 ntBASIC1.05□□□□□ -2.24
MSH5O43196 Y_RNA.449-201ENST00000384187 102 ntBASIC1.03□□□□□ -2.24
MSH5O43196 RNU6-351P-201ENST00000516097 100 ntBASIC1.03□□□□□ -2.24
MSH5O43196 MIR124-1-201ENST00000385275 85 ntBASIC1.02□□□□□ -2.25
MSH5O43196 MIR8087-201ENST00000612745 78 ntBASIC1.02□□□□□ -2.25
MSH5O43196 RNU6-737P-201ENST00000365370 107 ntBASIC1.01□□□□□ -2.25
MSH5O43196 RNU6-46P-201ENST00000383860 107 ntBASIC1.01□□□□□ -2.25
MSH5O43196 MIR4653-201ENST00000585107 83 ntBASIC1.01□□□□□ -2.25
MSH5O43196 RNA5SP257-201ENST00000363023 116 ntBASIC1□□□□□ -2.25
MSH5O43196 SNORD114-2-201ENST00000363953 78 ntBASIC1□□□□□ -2.25
MSH5O43196 MIR6866-201ENST00000638146 69 ntBASIC1□□□□□ -2.25
MSH5O43196 MIRLET7A2-201ENST00000362105 72 ntBASIC0.99□□□□□ -2.25
MSH5O43196 Y_RNA.433-201ENST00000384089 102 ntBASIC0.99□□□□□ -2.25
MSH5O43196 AC104692.1-201ENST00000472406 90 ntBASIC0.98□□□□□ -2.25
MSH5O43196 RNA5SP193-201ENST00000410353 107 ntBASIC0.97□□□□□ -2.25
MSH5O43196 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
MSH5O43196 RNA5SP347-201ENST00000362445 119 ntBASIC0.94□□□□□ -2.26
MSH5O43196 RNA5SP121-201ENST00000516537 101 ntBASIC0.94□□□□□ -2.26
MSH5O43196 SNORD114-5-201ENST00000362928 70 ntBASIC0.93□□□□□ -2.26
MSH5O43196 MIR4315-1-201ENST00000636800 73 ntBASIC0.91□□□□□ -2.26
MSH5O43196 MIR4315-2-201ENST00000640925 73 ntBASIC0.91□□□□□ -2.26
MSH5O43196 MIR330-201ENST00000362196 94 ntBASIC0.9□□□□□ -2.27
MSH5O43196 MIR6874-201ENST00000635894 71 ntBASIC0.9□□□□□ -2.27
MSH5O43196 MIR3123-201ENST00000583417 75 ntBASIC0.89□□□□□ -2.27
MSH5O43196 RNU6-431P-201ENST00000383874 107 ntBASIC0.88□□□□□ -2.27
MSH5O43196 MIR147A-201ENST00000385079 72 ntBASIC0.86□□□□□ -2.27
MSH5O43196 RNA5SP214-201ENST00000363378 118 ntBASIC0.85□□□□□ -2.27
MSH5O43196 RNU7-134P-201ENST00000458997 64 ntBASIC0.85□□□□□ -2.27
MSH5O43196 SNORD114-11-201ENST00000363738 75 ntBASIC0.83□□□□□ -2.28
MSH5O43196 SNORD64-201ENST00000386683 67 ntBASIC0.82□□□□□ -2.28
MSH5O43196 RNA5SP476-201ENST00000516613 103 ntBASIC0.82□□□□□ -2.28
MSH5O43196 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.82□□□□□ -2.28
MSH5O43196 RNU6-1327P-201ENST00000365302 105 ntBASIC0.81□□□□□ -2.28
MSH5O43196 RNA5SP499-201ENST00000363982 119 ntBASIC0.79□□□□□ -2.28
MSH5O43196 Y_RNA.484-201ENST00000384389 103 ntBASIC0.79□□□□□ -2.28
MSH5O43196 RNU6-400P-201ENST00000391173 106 ntBASIC0.79□□□□□ -2.28
MSH5O43196 AC091912.2-201ENST00000624798 167 ntBASIC0.78□□□□□ -2.28
MSH5O43196 MIR548AH-201ENST00000637109 76 ntBASIC0.78□□□□□ -2.28
MSH5O43196 Y_RNA.647-201ENST00000459194 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 Y_RNA.640-201ENST00000459296 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 Y_RNA.803-201ENST00000614432 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 Y_RNA.815-201ENST00000616655 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 MIR2909-201ENST00000617113 69 ntBASIC0.76□□□□□ -2.29
MSH5O43196 Y_RNA.795-201ENST00000619475 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 Y_RNA.827-201ENST00000638104 112 ntBASIC0.76□□□□□ -2.29
MSH5O43196 HAR1A.1-201ENST00000459583 118 ntBASIC0.75□□□□□ -2.29
MSH5O43196 AC097484.2-201ENST00000509147 251 ntBASIC0.75□□□□□ -2.29
MSH5O43196 SNORD114-12-201ENST00000365400 75 ntBASIC0.74□□□□□ -2.29
MSH5O43196 MIR92A1-201ENST00000385233 78 ntBASIC0.72□□□□□ -2.29
MSH5O43196 AC021146.6-201ENST00000514659 117 ntBASIC0.72□□□□□ -2.29
MSH5O43196 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms