Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 AC090616.4-201ENST00000448026 115 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 MIR5588-201ENST00000581890 63 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 MIR4490-201ENST00000582647 84 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 AC091912.2-201ENST00000624798 167 ntBASIC-0.95□□□□□ -2.56
Q9N2K0 MIR494-201ENST00000349529 81 ntBASIC-0.96□□□□□ -2.56
Q9N2K0 MIR520D-201ENST00000385002 87 ntBASIC-0.96□□□□□ -2.56
Q9N2K0 RNU6-630P-201ENST00000391258 106 ntBASIC-0.96□□□□□ -2.56
Q9N2K0 RNU6-698P-201ENST00000363523 107 ntBASIC-0.97□□□□□ -2.56
Q9N2K0 RNU6-34P-201ENST00000364874 107 ntBASIC-0.97□□□□□ -2.56
Q9N2K0 SNORD113-2-201ENST00000391082 72 ntBASIC-0.97□□□□□ -2.56
Q9N2K0 MIR3115-201ENST00000577915 68 ntBASIC-0.97□□□□□ -2.56
Q9N2K0 RNU6-668P-201ENST00000364180 107 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 RNU6-153P-201ENST00000364422 104 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 RNU6-979P-201ENST00000383896 107 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 SNORA41B-201ENST00000384785 128 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 RNU6-696P-201ENST00000390834 107 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 RNU6-576P-201ENST00000390854 102 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 Y_RNA.603-201ENST00000410571 108 ntBASIC-0.98□□□□□ -2.57
Q9N2K0 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.99□□□□□ -2.57
Q9N2K0 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.99□□□□□ -2.57
Q9N2K0 RNU6-608P-201ENST00000383927 104 ntBASIC-1□□□□□ -2.57
Q9N2K0 MIR29B1-201ENST00000385015 81 ntBASIC-1□□□□□ -2.57
Q9N2K0 MTND4LP1-201ENST00000446263 157 ntBASIC-1□□□□□ -2.57
Q9N2K0 RNU6-315P-201ENST00000362666 107 ntBASIC-1.01□□□□□ -2.57
Q9N2K0 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.01□□□□□ -2.57
Q9N2K0 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.01□□□□□ -2.57
Q9N2K0 RNU6-70P-201ENST00000516438 60 ntBASIC-1.01□□□□□ -2.57
Q9N2K0 MIR4712-201ENST00000583750 82 ntBASIC-1.01□□□□□ -2.57
Q9N2K0 RNA5SP192-201ENST00000364404 120 ntBASIC-1.02□□□□□ -2.57
Q9N2K0 RNU6-164P-201ENST00000364604 103 ntBASIC-1.02□□□□□ -2.57
Q9N2K0 SNORD115-31-201ENST00000365318 82 ntBASIC-1.02□□□□□ -2.57
Q9N2K0 MIR579-201ENST00000385221 98 ntBASIC-1.02□□□□□ -2.57
Q9N2K0 MIR4723-201ENST00000585070 81 ntBASIC-1.02□□□□□ -2.57
Q9N2K0 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.02□□□□□ -2.57
Q9N2K0 MIR3134-201ENST00000579433 74 ntBASIC-1.03□□□□□ -2.57
Q9N2K0 MIR4520-1-201ENST00000582609 70 ntBASIC-1.03□□□□□ -2.57
Q9N2K0 MIR4306-201ENST00000583390 91 ntBASIC-1.03□□□□□ -2.57
Q9N2K0 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 SNORD1B-201ENST00000363091 84 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 SNORD116-24-201ENST00000384549 92 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 MIR154-201ENST00000385243 84 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 RNU6-258P-201ENST00000390884 101 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 MIR3165-201ENST00000579874 75 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 MIR8053-201ENST00000613344 75 ntBASIC-1.04□□□□□ -2.58
Q9N2K0 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.05□□□□□ -2.58
Q9N2K0 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.05□□□□□ -2.58
Q9N2K0 SNORD116-16-201ENST00000384533 92 ntBASIC-1.06□□□□□ -2.58
Q9N2K0 RNU7-171P-201ENST00000459581 62 ntBASIC-1.06□□□□□ -2.58
Q9N2K0 MIR3170-201ENST00000582699 77 ntBASIC-1.06□□□□□ -2.58
Q9N2K0 MIR429-201ENST00000362106 83 ntBASIC-1.07□□□□□ -2.58
Q9N2K0 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.07□□□□□ -2.58
Q9N2K0 RNU6-787P-201ENST00000384032 107 ntBASIC-1.07□□□□□ -2.58
Q9N2K0 RNU6-895P-201ENST00000384125 103 ntBASIC-1.07□□□□□ -2.58
Q9N2K0 MIR1245B-201ENST00000636115 69 ntBASIC-1.07□□□□□ -2.58
Q9N2K0 RNA5SP215-201ENST00000363440 122 ntBASIC-1.08□□□□□ -2.58
Q9N2K0 RNU6-563P-201ENST00000364872 108 ntBASIC-1.08□□□□□ -2.58
Q9N2K0 RNU6-294P-201ENST00000364999 102 ntBASIC-1.08□□□□□ -2.58
Q9N2K0 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.08□□□□□ -2.58
Q9N2K0 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 AC018880.2-201ENST00000414265 201 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 RNU7-151P-201ENST00000516930 53 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.09□□□□□ -2.58
Q9N2K0 RNU6-247P-201ENST00000362636 107 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNU6-172P-201ENST00000411000 93 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNA5SP461-201ENST00000516451 104 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNU6-706P-201ENST00000517229 104 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.1□□□□□ -2.59
Q9N2K0 MIR5582-201ENST00000579697 68 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 AC062037.1-201ENST00000605302 128 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 U4.2-201ENST00000618561 85 ntBASIC-1.1□□□□□ -2.59
Q9N2K0 RNU6-974P-201ENST00000384099 108 ntBASIC-1.11□□□□□ -2.59
Q9N2K0 RNU6-242P-201ENST00000384359 107 ntBASIC-1.11□□□□□ -2.59
Q9N2K0 MIR548AA1-201ENST00000384971 97 ntBASIC-1.11□□□□□ -2.59
Q9N2K0 MIR450A2-201ENST00000385022 100 ntBASIC-1.11□□□□□ -2.59
Q9N2K0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.11□□□□□ -2.59
Q9N2K0 MIR6502-201ENST00000617296 76 ntBASIC-1.11□□□□□ -2.59
Q9N2K0 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.12□□□□□ -2.59
Q9N2K0 HLA-S-202ENST00000425174 53 ntBASIC-1.12□□□□□ -2.59
Q9N2K0 RNU6-687P-201ENST00000516443 89 ntBASIC-1.12□□□□□ -2.59
Q9N2K0 SNORD63.2-201ENST00000516303 64 ntBASIC-1.13□□□□□ -2.59
Q9N2K0 AC120024.2-201ENST00000576526 175 ntBASIC-1.13□□□□□ -2.59
Q9N2K0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.13□□□□□ -2.59
Q9N2K0 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.13□□□□□ -2.59
Q9N2K0 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.14□□□□□ -2.59
Q9N2K0 MIR4666B-201ENST00000578142 81 ntBASIC-1.14□□□□□ -2.59
Q9N2K0 MIR5591-201ENST00000578248 65 ntBASIC-1.14□□□□□ -2.59
Q9N2K0 MIR7978-201ENST00000636158 59 ntBASIC-1.14□□□□□ -2.59
Q9N2K0 RNU6-226P-201ENST00000363778 107 ntBASIC-1.15□□□□□ -2.59
Q9N2K0 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.15□□□□□ -2.59
Q9N2K0 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.15□□□□□ -2.59
Q9N2K0 RNU6-79P-201ENST00000362511 107 ntBASIC-1.16□□□□□ -2.6
Q9N2K0 RNA5SP173-201ENST00000364857 136 ntBASIC-1.16□□□□□ -2.6
Q9N2K0 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.16□□□□□ -2.6
Q9N2K0 RNU6-669P-201ENST00000365575 107 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms