Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 MIR216A-201ENST00000385063 110 ntBASIC2.1□□□□□ -2.07
SENP3Q9H4L4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC2.1□□□□□ -2.07
SENP3Q9H4L4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC2.1□□□□□ -2.07
SENP3Q9H4L4 uc_338.20-201ENST00000621563 178 ntBASIC2.09□□□□□ -2.07
SENP3Q9H4L4 RNU6-563P-201ENST00000364872 108 ntBASIC2.07□□□□□ -2.08
SENP3Q9H4L4 MIR507-201ENST00000385234 94 ntBASIC2.06□□□□□ -2.08
SENP3Q9H4L4 AC120024.2-201ENST00000576526 175 ntBASIC2.06□□□□□ -2.08
SENP3Q9H4L4 MIR6767-201ENST00000637302 66 ntBASIC2.06□□□□□ -2.08
SENP3Q9H4L4 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
SENP3Q9H4L4 RNU6-863P-201ENST00000515989 104 ntBASIC2.05□□□□□ -2.08
SENP3Q9H4L4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
SENP3Q9H4L4 SNORD18C-201ENST00000362704 69 ntBASIC2.04□□□□□ -2.08
SENP3Q9H4L4 AL445193.1-201ENST00000441183 141 ntBASIC2.04□□□□□ -2.08
SENP3Q9H4L4 RNU6-912P-201ENST00000363800 104 ntBASIC2.03□□□□□ -2.08
SENP3Q9H4L4 RPS29P23-201ENST00000458635 123 ntBASIC2.03□□□□□ -2.08
SENP3Q9H4L4 CR383656.4-201ENST00000546909 122 ntBASIC2.03□□□□□ -2.08
SENP3Q9H4L4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SENP3Q9H4L4 RNA5SP476-201ENST00000516613 103 ntBASIC2.01□□□□□ -2.09
SENP3Q9H4L4 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC2.01□□□□□ -2.09
SENP3Q9H4L4 RNU6-127P-201ENST00000390897 107 ntBASIC2□□□□□ -2.09
SENP3Q9H4L4 MIR4661-201ENST00000582720 75 ntBASIC1.98□□□□□ -2.09
SENP3Q9H4L4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.97□□□□□ -2.09
SENP3Q9H4L4 Y_RNA.115-201ENST00000363272 98 ntBASIC1.96□□□□□ -2.1
SENP3Q9H4L4 MIR608-201ENST00000384820 100 ntBASIC1.95□□□□□ -2.1
SENP3Q9H4L4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SENP3Q9H4L4 HAR1A.1-201ENST00000459583 118 ntBASIC1.93□□□□□ -2.1
SENP3Q9H4L4 MIR148A-201ENST00000362215 68 ntBASIC1.92□□□□□ -2.1
SENP3Q9H4L4 MIR4280-201ENST00000582178 76 ntBASIC1.92□□□□□ -2.1
SENP3Q9H4L4 Y_RNA.433-201ENST00000384089 102 ntBASIC1.91□□□□□ -2.1
SENP3Q9H4L4 RNA5SP163-201ENST00000410304 99 ntBASIC1.91□□□□□ -2.1
SENP3Q9H4L4 SNORD44.1-201ENST00000363202 61 ntBASIC1.9□□□□□ -2.11
SENP3Q9H4L4 MIR193B-201ENST00000384907 83 ntBASIC1.9□□□□□ -2.11
SENP3Q9H4L4 MIR656-201ENST00000385224 78 ntBASIC1.9□□□□□ -2.11
SENP3Q9H4L4 MIR5000-201ENST00000577717 103 ntBASIC1.9□□□□□ -2.11
SENP3Q9H4L4 MIR320A-201ENST00000385302 82 ntBASIC1.89□□□□□ -2.11
SENP3Q9H4L4 RNA5SP62-201ENST00000363457 110 ntBASIC1.88□□□□□ -2.11
SENP3Q9H4L4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
SENP3Q9H4L4 SNORD38.3-201ENST00000516599 73 ntBASIC1.87□□□□□ -2.11
SENP3Q9H4L4 MIR1273G-201ENST00000577677 100 ntBASIC1.86□□□□□ -2.11
SENP3Q9H4L4 SNORD74.6-201ENST00000364796 70 ntBASIC1.85□□□□□ -2.11
SENP3Q9H4L4 RNU6-620P-201ENST00000384017 96 ntBASIC1.85□□□□□ -2.11
SENP3Q9H4L4 SNORD114-17-201ENST00000364699 75 ntBASIC1.84□□□□□ -2.11
SENP3Q9H4L4 AC090616.4-201ENST00000448026 115 ntBASIC1.84□□□□□ -2.11
SENP3Q9H4L4 MIR3122-201ENST00000577243 73 ntBASIC1.84□□□□□ -2.11
SENP3Q9H4L4 RNU6-180P-201ENST00000516697 61 ntBASIC1.83□□□□□ -2.12
SENP3Q9H4L4 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.83□□□□□ -2.12
SENP3Q9H4L4 RNU6-110P-201ENST00000384508 104 ntBASIC1.82□□□□□ -2.12
SENP3Q9H4L4 AC244250.2-201ENST00000418731 148 ntBASIC1.82□□□□□ -2.12
SENP3Q9H4L4 MIR3660-201ENST00000584845 100 ntBASIC1.8□□□□□ -2.12
SENP3Q9H4L4 RNA5SP457-201ENST00000363657 124 ntBASIC1.78□□□□□ -2.12
SENP3Q9H4L4 MIR6851-201ENST00000617060 67 ntBASIC1.78□□□□□ -2.12
SENP3Q9H4L4 Y_RNA.781-201ENST00000620301 103 ntBASIC1.78□□□□□ -2.12
SENP3Q9H4L4 MIR892B-201ENST00000401279 77 ntBASIC1.76□□□□□ -2.13
SENP3Q9H4L4 RNA5SP330-201ENST00000517096 96 ntBASIC1.75□□□□□ -2.13
SENP3Q9H4L4 MIR4295-201ENST00000585286 85 ntBASIC1.74□□□□□ -2.13
SENP3Q9H4L4 SNORD22.1-201ENST00000516331 125 ntBASIC1.72□□□□□ -2.13
SENP3Q9H4L4 RNU6-284P-201ENST00000411105 106 ntBASIC1.71□□□□□ -2.14
SENP3Q9H4L4 AC068338.1-201ENST00000565567 176 ntBASIC1.71□□□□□ -2.14
SENP3Q9H4L4 MIR103A1-201ENST00000362165 78 ntBASIC1.7□□□□□ -2.14
SENP3Q9H4L4 RNA5SP257-201ENST00000363023 116 ntBASIC1.7□□□□□ -2.14
SENP3Q9H4L4 AC090625.1-201ENST00000357130 210 ntBASIC1.69□□□□□ -2.14
SENP3Q9H4L4 RNU6-1340P-201ENST00000384438 107 ntBASIC1.68□□□□□ -2.14
SENP3Q9H4L4 RNU6-815P-201ENST00000384080 113 ntBASIC1.67□□□□□ -2.14
SENP3Q9H4L4 MIR373-201ENST00000362273 69 ntBASIC1.66□□□□□ -2.14
SENP3Q9H4L4 RNU6-939P-201ENST00000384634 107 ntBASIC1.66□□□□□ -2.14
SENP3Q9H4L4 MIR518B-201ENST00000385127 83 ntBASIC1.66□□□□□ -2.14
SENP3Q9H4L4 MIR1254-1-201ENST00000408257 97 ntBASIC1.66□□□□□ -2.14
SENP3Q9H4L4 MIR548H2-201ENST00000408874 88 ntBASIC1.66□□□□□ -2.14
SENP3Q9H4L4 CYP3A137P-201ENST00000562436 69 ntBASIC1.65□□□□□ -2.15
SENP3Q9H4L4 AC211469.2-201ENST00000605461 205 ntBASIC1.65□□□□□ -2.15
SENP3Q9H4L4 RNU6-1024P-201ENST00000384199 107 ntBASIC1.63□□□□□ -2.15
SENP3Q9H4L4 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
SENP3Q9H4L4 RNU6-955P-201ENST00000410497 104 ntBASIC1.63□□□□□ -2.15
SENP3Q9H4L4 SNORD75.1-201ENST00000408373 60 ntBASIC1.62□□□□□ -2.15
SENP3Q9H4L4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SENP3Q9H4L4 RNU6-345P-201ENST00000517001 107 ntBASIC1.61□□□□□ -2.15
SENP3Q9H4L4 MIR3973-201ENST00000579824 107 ntBASIC1.61□□□□□ -2.15
SENP3Q9H4L4 PSMC1P5-201ENST00000512850 177 ntBASIC1.59□□□□□ -2.15
SENP3Q9H4L4 MIR924-201ENST00000638017 53 ntBASIC1.59□□□□□ -2.15
SENP3Q9H4L4 MIR655-201ENST00000362159 97 ntBASIC1.58□□□□□ -2.16
SENP3Q9H4L4 RNA5SP121-201ENST00000516537 101 ntBASIC1.58□□□□□ -2.16
SENP3Q9H4L4 MIR4714-201ENST00000580728 77 ntBASIC1.58□□□□□ -2.16
SENP3Q9H4L4 MIR4698-201ENST00000577795 80 ntBASIC1.57□□□□□ -2.16
SENP3Q9H4L4 SNORD114-21-201ENST00000606412 72 ntBASIC1.57□□□□□ -2.16
SENP3Q9H4L4 AP000533.3-201ENST00000447704 118 ntBASIC1.55□□□□□ -2.16
SENP3Q9H4L4 SNORA68.3-201ENST00000515906 83 ntBASIC1.55□□□□□ -2.16
SENP3Q9H4L4 MIR6086-201ENST00000638065 55 ntBASIC1.55□□□□□ -2.16
SENP3Q9H4L4 SNORD114-23-201ENST00000363536 72 ntBASIC1.53□□□□□ -2.16
SENP3Q9H4L4 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SENP3Q9H4L4 MIR4645-201ENST00000583158 77 ntBASIC1.52□□□□□ -2.17
SENP3Q9H4L4 MIR8087-201ENST00000612745 78 ntBASIC1.52□□□□□ -2.17
SENP3Q9H4L4 RNU6-1324P-201ENST00000384222 107 ntBASIC1.51□□□□□ -2.17
SENP3Q9H4L4 RNA5SP26-201ENST00000362406 119 ntBASIC1.5□□□□□ -2.17
SENP3Q9H4L4 Y_RNA.434-201ENST00000384090 100 ntBASIC1.5□□□□□ -2.17
SENP3Q9H4L4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.5□□□□□ -2.17
SENP3Q9H4L4 SNORA32.1-201ENST00000364514 115 ntBASIC1.47□□□□□ -2.17
SENP3Q9H4L4 MIR593-201ENST00000384856 100 ntBASIC1.46□□□□□ -2.18
SENP3Q9H4L4 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
SENP3Q9H4L4 MIR936-201ENST00000401264 98 ntBASIC1.45□□□□□ -2.18
SENP3Q9H4L4 AC069113.3-201ENST00000521019 150 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms