Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 MIR148A-201ENST00000362215 68 ntBASIC1.51□□□□□ -2.17
RNF39Q9H2S5 SNORD114-17-201ENST00000364699 75 ntBASIC1.5□□□□□ -2.17
RNF39Q9H2S5 MIR4452-201ENST00000583004 71 ntBASIC1.5□□□□□ -2.17
RNF39Q9H2S5 RNU6-42P-201ENST00000384165 107 ntBASIC1.49□□□□□ -2.17
RNF39Q9H2S5 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
RNF39Q9H2S5 RNA5SP102-201ENST00000516865 106 ntBASIC1.48□□□□□ -2.17
RNF39Q9H2S5 AL353770.2-201ENST00000620024 78 ntBASIC1.48□□□□□ -2.17
RNF39Q9H2S5 RNA5SP220-201ENST00000516298 104 ntBASIC1.47□□□□□ -2.17
RNF39Q9H2S5 MIR6734-201ENST00000621166 68 ntBASIC1.47□□□□□ -2.17
RNF39Q9H2S5 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
RNF39Q9H2S5 SNORD38.3-201ENST00000516599 73 ntBASIC1.46□□□□□ -2.18
RNF39Q9H2S5 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
RNF39Q9H2S5 Y_RNA.434-201ENST00000384090 100 ntBASIC1.44□□□□□ -2.18
RNF39Q9H2S5 RNU6-1324P-201ENST00000384222 107 ntBASIC1.44□□□□□ -2.18
RNF39Q9H2S5 RNA5SP163-201ENST00000410304 99 ntBASIC1.44□□□□□ -2.18
RNF39Q9H2S5 MIR6851-201ENST00000617060 67 ntBASIC1.43□□□□□ -2.18
RNF39Q9H2S5 MIR3660-201ENST00000584845 100 ntBASIC1.42□□□□□ -2.18
RNF39Q9H2S5 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
RNF39Q9H2S5 RNU6-1043P-201ENST00000410355 99 ntBASIC1.41□□□□□ -2.18
RNF39Q9H2S5 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
RNF39Q9H2S5 RNU6-180P-201ENST00000516697 61 ntBASIC1.41□□□□□ -2.18
RNF39Q9H2S5 MIR4661-201ENST00000582720 75 ntBASIC1.41□□□□□ -2.18
RNF39Q9H2S5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
RNF39Q9H2S5 SNORD44.1-201ENST00000363202 61 ntBASIC1.39□□□□□ -2.19
RNF39Q9H2S5 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RNF39Q9H2S5 AC244250.2-201ENST00000418731 148 ntBASIC1.39□□□□□ -2.19
RNF39Q9H2S5 SNORD22.1-201ENST00000516331 125 ntBASIC1.39□□□□□ -2.19
RNF39Q9H2S5 AC090625.1-201ENST00000357130 210 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 MIR608-201ENST00000384820 100 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 MIR518B-201ENST00000385127 83 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 MIR892B-201ENST00000401279 77 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 RPS29P1-201ENST00000465274 159 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
RNF39Q9H2S5 RNU6-422P-201ENST00000384632 107 ntBASIC1.36□□□□□ -2.19
RNF39Q9H2S5 RNA5SP480-201ENST00000516840 109 ntBASIC1.36□□□□□ -2.19
RNF39Q9H2S5 Y_RNA.540-201ENST00000384638 111 ntBASIC1.34□□□□□ -2.19
RNF39Q9H2S5 SNORD75.1-201ENST00000408373 60 ntBASIC1.34□□□□□ -2.19
RNF39Q9H2S5 MIR96-201ENST00000362288 78 ntBASIC1.33□□□□□ -2.2
RNF39Q9H2S5 RNU6-627P-201ENST00000364032 102 ntBASIC1.33□□□□□ -2.2
RNF39Q9H2S5 RNU6-110P-201ENST00000384508 104 ntBASIC1.33□□□□□ -2.2
RNF39Q9H2S5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RNF39Q9H2S5 AL500527.2-201ENST00000454105 95 ntBASIC1.32□□□□□ -2.2
RNF39Q9H2S5 RNA5SP26-201ENST00000362406 119 ntBASIC1.3□□□□□ -2.2
RNF39Q9H2S5 Y_RNA.59-201ENST00000362828 102 ntBASIC1.3□□□□□ -2.2
RNF39Q9H2S5 MIR6515-201ENST00000619843 57 ntBASIC1.3□□□□□ -2.2
RNF39Q9H2S5 SNORA32.1-201ENST00000364514 115 ntBASIC1.29□□□□□ -2.2
RNF39Q9H2S5 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
RNF39Q9H2S5 AC022709.1-201ENST00000615967 87 ntBASIC1.29□□□□□ -2.2
RNF39Q9H2S5 SNORD114-27-201ENST00000363766 70 ntBASIC1.28□□□□□ -2.2
RNF39Q9H2S5 AC018880.2-201ENST00000414265 201 ntBASIC1.28□□□□□ -2.2
RNF39Q9H2S5 AP000533.3-201ENST00000447704 118 ntBASIC1.27□□□□□ -2.21
RNF39Q9H2S5 MIR4645-201ENST00000583158 77 ntBASIC1.27□□□□□ -2.21
RNF39Q9H2S5 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
RNF39Q9H2S5 SNORD114-26-201ENST00000363543 72 ntBASIC1.25□□□□□ -2.21
RNF39Q9H2S5 RNU6-79P-201ENST00000362511 107 ntBASIC1.24□□□□□ -2.21
RNF39Q9H2S5 MIR6767-201ENST00000637302 66 ntBASIC1.24□□□□□ -2.21
RNF39Q9H2S5 MIR655-201ENST00000362159 97 ntBASIC1.23□□□□□ -2.21
RNF39Q9H2S5 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
RNF39Q9H2S5 SNORA13-201ENST00000458790 133 ntBASIC1.23□□□□□ -2.21
RNF39Q9H2S5 MIR548H2-201ENST00000408874 88 ntBASIC1.22□□□□□ -2.21
RNF39Q9H2S5 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.21□□□□□ -2.22
RNF39Q9H2S5 MIR4295-201ENST00000585286 85 ntBASIC1.21□□□□□ -2.22
RNF39Q9H2S5 MIR6779-201ENST00000617283 64 ntBASIC1.21□□□□□ -2.22
RNF39Q9H2S5 MIR6788-201ENST00000618842 66 ntBASIC1.21□□□□□ -2.22
RNF39Q9H2S5 MIR103A1-201ENST00000362165 78 ntBASIC1.2□□□□□ -2.22
RNF39Q9H2S5 RNU6-815P-201ENST00000384080 113 ntBASIC1.2□□□□□ -2.22
RNF39Q9H2S5 MIR598-201ENST00000384868 97 ntBASIC1.2□□□□□ -2.22
RNF39Q9H2S5 PVT1_3.1-201ENST00000620853 95 ntBASIC1.2□□□□□ -2.22
RNF39Q9H2S5 SNORD19B.1-201ENST00000630615 80 ntBASIC1.19□□□□□ -2.22
RNF39Q9H2S5 RNU6-892P-201ENST00000410335 99 ntBASIC1.18□□□□□ -2.22
RNF39Q9H2S5 MIR3179-1-201ENST00000578940 84 ntBASIC1.18□□□□□ -2.22
RNF39Q9H2S5 MIR3179-2-201ENST00000579107 84 ntBASIC1.18□□□□□ -2.22
RNF39Q9H2S5 MIR3179-3-201ENST00000579566 84 ntBASIC1.18□□□□□ -2.22
RNF39Q9H2S5 MIR3179-4-201ENST00000617599 84 ntBASIC1.18□□□□□ -2.22
RNF39Q9H2S5 Y_RNA.189-201ENST00000363959 112 ntBASIC1.17□□□□□ -2.22
RNF39Q9H2S5 SNORD114-21-201ENST00000606412 72 ntBASIC1.17□□□□□ -2.22
RNF39Q9H2S5 RNU6-854P-201ENST00000364036 107 ntBASIC1.16□□□□□ -2.22
RNF39Q9H2S5 Y_RNA.349-201ENST00000365406 102 ntBASIC1.16□□□□□ -2.22
RNF39Q9H2S5 RNU6-939P-201ENST00000384634 107 ntBASIC1.15□□□□□ -2.23
RNF39Q9H2S5 MIR548H1-201ENST00000408610 102 ntBASIC1.15□□□□□ -2.23
RNF39Q9H2S5 MIR146A-201ENST00000385201 99 ntBASIC1.14□□□□□ -2.23
RNF39Q9H2S5 RNA5SP66-201ENST00000517178 101 ntBASIC1.14□□□□□ -2.23
RNF39Q9H2S5 MIR150-201ENST00000385048 84 ntBASIC1.13□□□□□ -2.23
RNF39Q9H2S5 AC093726.3-201ENST00000637588 150 ntBASIC1.12□□□□□ -2.23
RNF39Q9H2S5 MIR373-201ENST00000362273 69 ntBASIC1.11□□□□□ -2.23
RNF39Q9H2S5 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
RNF39Q9H2S5 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
RNF39Q9H2S5 RNA5SP62-201ENST00000363457 110 ntBASIC1.08□□□□□ -2.24
RNF39Q9H2S5 MIR593-201ENST00000384856 100 ntBASIC1.08□□□□□ -2.24
RNF39Q9H2S5 PSMC1P5-201ENST00000512850 177 ntBASIC1.08□□□□□ -2.24
RNF39Q9H2S5 SNORA68.3-201ENST00000515906 83 ntBASIC1.08□□□□□ -2.24
RNF39Q9H2S5 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
RNF39Q9H2S5 RNU7-165P-201ENST00000458864 60 ntBASIC1.07□□□□□ -2.24
RNF39Q9H2S5 AC069113.3-201ENST00000521019 150 ntBASIC1.07□□□□□ -2.24
RNF39Q9H2S5 MIR204-201ENST00000385200 110 ntBASIC1.06□□□□□ -2.24
RNF39Q9H2S5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
RNF39Q9H2S5 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.06□□□□□ -2.24
RNF39Q9H2S5 MIR610-201ENST00000385139 96 ntBASIC1.05□□□□□ -2.24
RNF39Q9H2S5 Z95118.1-201ENST00000421372 247 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 1319 ms