Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 MIR4315-2-201ENST00000640925 73 ntBASIC0.44□□□□□ -2.34
NUCKS1Q9H1E3 SNORA50A-201ENST00000384225 134 ntBASIC0.43□□□□□ -2.34
NUCKS1Q9H1E3 RNU6-822P-201ENST00000362707 106 ntBASIC0.42□□□□□ -2.34
NUCKS1Q9H1E3 MIR1468-201ENST00000410600 86 ntBASIC0.42□□□□□ -2.34
NUCKS1Q9H1E3 RNU7-165P-201ENST00000458864 60 ntBASIC0.42□□□□□ -2.34
NUCKS1Q9H1E3 MIR4743-201ENST00000584576 69 ntBASIC0.42□□□□□ -2.34
NUCKS1Q9H1E3 MIR655-201ENST00000362159 97 ntBASIC0.41□□□□□ -2.34
NUCKS1Q9H1E3 AL445193.1-201ENST00000441183 141 ntBASIC0.41□□□□□ -2.34
NUCKS1Q9H1E3 MIR145-201ENST00000384967 88 ntBASIC0.4□□□□□ -2.35
NUCKS1Q9H1E3 RNU6-724P-201ENST00000390958 105 ntBASIC0.4□□□□□ -2.35
NUCKS1Q9H1E3 MIR548H4-201ENST00000408689 111 ntBASIC0.4□□□□□ -2.35
NUCKS1Q9H1E3 RNU7-159P-201ENST00000459284 62 ntBASIC0.4□□□□□ -2.35
NUCKS1Q9H1E3 RNU6-1008P-201ENST00000384160 104 ntBASIC0.39□□□□□ -2.35
NUCKS1Q9H1E3 Y_RNA.540-201ENST00000384638 111 ntBASIC0.39□□□□□ -2.35
NUCKS1Q9H1E3 MIR4280-201ENST00000582178 76 ntBASIC0.39□□□□□ -2.35
NUCKS1Q9H1E3 Y_RNA.699-201ENST00000516803 93 ntBASIC0.38□□□□□ -2.35
NUCKS1Q9H1E3 RN7SL793P-201ENST00000583259 296 ntBASIC0.38□□□□□ -2.35
NUCKS1Q9H1E3 SNORA27.2-201ENST00000363365 126 ntBASIC0.36□□□□□ -2.35
NUCKS1Q9H1E3 VTRNA1-3-201ENST00000365645 89 ntBASIC0.36□□□□□ -2.35
NUCKS1Q9H1E3 AP002795.1-201ENST00000534879 84 ntBASIC0.36□□□□□ -2.35
NUCKS1Q9H1E3 RNA5SP214-201ENST00000363378 118 ntBASIC0.35□□□□□ -2.35
NUCKS1Q9H1E3 SNORD114-23-201ENST00000363536 72 ntBASIC0.35□□□□□ -2.35
NUCKS1Q9H1E3 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
NUCKS1Q9H1E3 SNORD38.3-201ENST00000516599 73 ntBASIC0.33□□□□□ -2.36
NUCKS1Q9H1E3 MIR6851-201ENST00000617060 67 ntBASIC0.33□□□□□ -2.36
NUCKS1Q9H1E3 SNORD114-5-201ENST00000362928 70 ntBASIC0.32□□□□□ -2.36
NUCKS1Q9H1E3 RNU6-59P-201ENST00000384787 107 ntBASIC0.32□□□□□ -2.36
NUCKS1Q9H1E3 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.31□□□□□ -2.36
NUCKS1Q9H1E3 RNA5SP480-201ENST00000516840 109 ntBASIC0.31□□□□□ -2.36
NUCKS1Q9H1E3 SNORD114-9-201ENST00000364370 72 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 SNORD49B-201ENST00000365172 72 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 SNORD18.2-201ENST00000459604 70 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 MIR5683-201ENST00000636514 76 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 U6.103-201ENST00000637085 61 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 MIR4426-201ENST00000640330 63 ntBASIC0.3□□□□□ -2.36
NUCKS1Q9H1E3 SNORA26.4-201ENST00000391188 123 ntBASIC0.29□□□□□ -2.36
NUCKS1Q9H1E3 AC010487.4-201ENST00000637027 61 ntBASIC0.29□□□□□ -2.36
NUCKS1Q9H1E3 RNU6-46P-201ENST00000383860 107 ntBASIC0.28□□□□□ -2.36
NUCKS1Q9H1E3 RNU6-929P-201ENST00000384429 107 ntBASIC0.28□□□□□ -2.36
NUCKS1Q9H1E3 RNA5SP169-201ENST00000517268 117 ntBASIC0.28□□□□□ -2.36
NUCKS1Q9H1E3 SNORD114-26-201ENST00000363543 72 ntBASIC0.27□□□□□ -2.37
NUCKS1Q9H1E3 SNORD74.6-201ENST00000364796 70 ntBASIC0.27□□□□□ -2.37
NUCKS1Q9H1E3 RNU6-608P-201ENST00000383927 104 ntBASIC0.27□□□□□ -2.37
NUCKS1Q9H1E3 AL353691.2-201ENST00000443795 59 ntBASIC0.27□□□□□ -2.37
NUCKS1Q9H1E3 MIR5093-201ENST00000583199 100 ntBASIC0.27□□□□□ -2.37
NUCKS1Q9H1E3 MIR193B-201ENST00000384907 83 ntBASIC0.25□□□□□ -2.37
NUCKS1Q9H1E3 SNORD115-33-201ENST00000363723 82 ntBASIC0.24□□□□□ -2.37
NUCKS1Q9H1E3 RNU6-1326P-201ENST00000391262 107 ntBASIC0.24□□□□□ -2.37
NUCKS1Q9H1E3 MIR4317-201ENST00000637586 65 ntBASIC0.24□□□□□ -2.37
NUCKS1Q9H1E3 RNU6-1047P-201ENST00000364418 107 ntBASIC0.23□□□□□ -2.37
NUCKS1Q9H1E3 RNU6-361P-201ENST00000364454 107 ntBASIC0.23□□□□□ -2.37
NUCKS1Q9H1E3 RNY3P8-201ENST00000411366 126 ntBASIC0.23□□□□□ -2.37
NUCKS1Q9H1E3 SNORD22.1-201ENST00000516331 125 ntBASIC0.23□□□□□ -2.37
NUCKS1Q9H1E3 RNA5SP66-201ENST00000517178 101 ntBASIC0.23□□□□□ -2.37
NUCKS1Q9H1E3 MIR518B-201ENST00000385127 83 ntBASIC0.22□□□□□ -2.37
NUCKS1Q9H1E3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
NUCKS1Q9H1E3 AL590491.3-201ENST00000610731 82 ntBASIC0.22□□□□□ -2.37
NUCKS1Q9H1E3 MIR924-201ENST00000638017 53 ntBASIC0.22□□□□□ -2.37
NUCKS1Q9H1E3 MIR202-201ENST00000362219 110 ntBASIC0.21□□□□□ -2.38
NUCKS1Q9H1E3 MIR4514-201ENST00000581410 57 ntBASIC0.21□□□□□ -2.38
NUCKS1Q9H1E3 Y_RNA.345-201ENST00000365384 92 ntBASIC0.2□□□□□ -2.38
NUCKS1Q9H1E3 MIR1273G-201ENST00000577677 100 ntBASIC0.2□□□□□ -2.38
NUCKS1Q9H1E3 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
NUCKS1Q9H1E3 AC093726.3-201ENST00000637588 150 ntBASIC0.2□□□□□ -2.38
NUCKS1Q9H1E3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.19□□□□□ -2.38
NUCKS1Q9H1E3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
NUCKS1Q9H1E3 SNORD75.1-201ENST00000408373 60 ntBASIC0.17□□□□□ -2.38
NUCKS1Q9H1E3 RNU6-300P-201ENST00000459080 104 ntBASIC0.17□□□□□ -2.38
NUCKS1Q9H1E3 SNORD114-17-201ENST00000364699 75 ntBASIC0.16□□□□□ -2.38
NUCKS1Q9H1E3 SNORA17.4-201ENST00000391287 132 ntBASIC0.16□□□□□ -2.38
NUCKS1Q9H1E3 RNY1P9-201ENST00000532431 109 ntBASIC0.16□□□□□ -2.38
NUCKS1Q9H1E3 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
NUCKS1Q9H1E3 MIR330-201ENST00000362196 94 ntBASIC0.15□□□□□ -2.39
NUCKS1Q9H1E3 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
NUCKS1Q9H1E3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.15□□□□□ -2.39
NUCKS1Q9H1E3 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.15□□□□□ -2.39
NUCKS1Q9H1E3 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
NUCKS1Q9H1E3 MIR4290-201ENST00000583807 95 ntBASIC0.14□□□□□ -2.39
NUCKS1Q9H1E3 AC023932.2-201ENST00000603176 175 ntBASIC0.14□□□□□ -2.39
NUCKS1Q9H1E3 AP000533.3-201ENST00000447704 118 ntBASIC0.13□□□□□ -2.39
NUCKS1Q9H1E3 AC104692.1-201ENST00000472406 90 ntBASIC0.13□□□□□ -2.39
NUCKS1Q9H1E3 RPL35AP4-201ENST00000412007 102 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 RNA5SP330-201ENST00000517096 96 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR3179-1-201ENST00000578940 84 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR3179-2-201ENST00000579107 84 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR3179-3-201ENST00000579566 84 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR4263-201ENST00000584745 83 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR8087-201ENST00000612745 78 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 MIR3179-4-201ENST00000617599 84 ntBASIC0.12□□□□□ -2.39
NUCKS1Q9H1E3 Y_RNA.206-201ENST00000364136 102 ntBASIC0.11□□□□□ -2.39
NUCKS1Q9H1E3 Y_RNA.189-201ENST00000363959 112 ntBASIC0.1□□□□□ -2.39
NUCKS1Q9H1E3 SNORD114-12-201ENST00000365400 75 ntBASIC0.1□□□□□ -2.39
NUCKS1Q9H1E3 MIR1197-201ENST00000408818 88 ntBASIC0.1□□□□□ -2.39
NUCKS1Q9H1E3 MIR204-201ENST00000385200 110 ntBASIC0.09□□□□□ -2.4
NUCKS1Q9H1E3 MIR507-201ENST00000385234 94 ntBASIC0.08□□□□□ -2.4
NUCKS1Q9H1E3 SNORA13-201ENST00000458790 133 ntBASIC0.08□□□□□ -2.4
NUCKS1Q9H1E3 RNU6-176P-201ENST00000517196 105 ntBASIC0.08□□□□□ -2.4
NUCKS1Q9H1E3 SNORA18.1-201ENST00000363418 128 ntBASIC0.07□□□□□ -2.4
NUCKS1Q9H1E3 SNORD60-201ENST00000383903 83 ntBASIC0.06□□□□□ -2.4
NUCKS1Q9H1E3 MIR3666-201ENST00000607845 111 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 172.4 ms