Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 SNORD64-201ENST00000386683 67 ntBASIC-0.82□□□□□ -2.54
PAAF1Q9BRP4 AL500527.2-201ENST00000454105 95 ntBASIC-0.82□□□□□ -2.54
PAAF1Q9BRP4 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.83□□□□□ -2.54
PAAF1Q9BRP4 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.84□□□□□ -2.54
PAAF1Q9BRP4 MIR147A-201ENST00000385079 72 ntBASIC-0.84□□□□□ -2.54
PAAF1Q9BRP4 SNORD57-201ENST00000448188 72 ntBASIC-0.84□□□□□ -2.54
PAAF1Q9BRP4 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.85□□□□□ -2.55
PAAF1Q9BRP4 MIR889-201ENST00000401280 79 ntBASIC-0.85□□□□□ -2.55
PAAF1Q9BRP4 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.85□□□□□ -2.55
PAAF1Q9BRP4 MIR548AG1-201ENST00000579932 66 ntBASIC-0.85□□□□□ -2.55
PAAF1Q9BRP4 RNU6-871P-201ENST00000516122 100 ntBASIC-0.86□□□□□ -2.55
PAAF1Q9BRP4 MIR4324-201ENST00000584846 72 ntBASIC-0.86□□□□□ -2.55
PAAF1Q9BRP4 SNORD116-24-201ENST00000384549 92 ntBASIC-0.87□□□□□ -2.55
PAAF1Q9BRP4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.87□□□□□ -2.55
PAAF1Q9BRP4 RNU6-634P-201ENST00000459134 106 ntBASIC-0.87□□□□□ -2.55
PAAF1Q9BRP4 U4.4-201ENST00000620626 117 ntBASIC-0.87□□□□□ -2.55
PAAF1Q9BRP4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.88□□□□□ -2.55
PAAF1Q9BRP4 SNORD83B-201ENST00000386745 93 ntBASIC-0.88□□□□□ -2.55
PAAF1Q9BRP4 SCARNA17-201ENST00000516183 144 ntBASIC-0.88□□□□□ -2.55
PAAF1Q9BRP4 SNORA72.7-201ENST00000516349 94 ntBASIC-0.88□□□□□ -2.55
PAAF1Q9BRP4 RNU6-458P-201ENST00000384179 107 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 U7.5-201ENST00000517224 61 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 MIR548AX-201ENST00000580117 73 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 U6.58-201ENST00000613107 107 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 MIR6738-201ENST00000619620 64 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 MIR382-201ENST00000637119 76 ntBASIC-0.89□□□□□ -2.55
PAAF1Q9BRP4 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.9□□□□□ -2.55
PAAF1Q9BRP4 RNU6-663P-201ENST00000391105 106 ntBASIC-0.9□□□□□ -2.55
PAAF1Q9BRP4 MIR4662A-201ENST00000637499 67 ntBASIC-0.9□□□□□ -2.55
PAAF1Q9BRP4 RNU6-246P-201ENST00000384702 107 ntBASIC-0.91□□□□□ -2.56
PAAF1Q9BRP4 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.91□□□□□ -2.56
PAAF1Q9BRP4 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.91□□□□□ -2.56
PAAF1Q9BRP4 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.92□□□□□ -2.56
PAAF1Q9BRP4 SNORD30.1-201ENST00000391309 70 ntBASIC-0.92□□□□□ -2.56
PAAF1Q9BRP4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.92□□□□□ -2.56
PAAF1Q9BRP4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.92□□□□□ -2.56
PAAF1Q9BRP4 RNU6-10P-201ENST00000384036 107 ntBASIC-0.93□□□□□ -2.56
PAAF1Q9BRP4 RNU6-542P-201ENST00000516405 103 ntBASIC-0.93□□□□□ -2.56
PAAF1Q9BRP4 uc_338.19-201ENST00000616808 99 ntBASIC-0.93□□□□□ -2.56
PAAF1Q9BRP4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.94□□□□□ -2.56
PAAF1Q9BRP4 MIR4499-201ENST00000584834 69 ntBASIC-0.94□□□□□ -2.56
PAAF1Q9BRP4 RNU6-540P-201ENST00000384622 101 ntBASIC-0.95□□□□□ -2.56
PAAF1Q9BRP4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.95□□□□□ -2.56
PAAF1Q9BRP4 RNY1P9-201ENST00000532431 109 ntBASIC-0.95□□□□□ -2.56
PAAF1Q9BRP4 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.96□□□□□ -2.56
PAAF1Q9BRP4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.96□□□□□ -2.56
PAAF1Q9BRP4 RNU6-630P-201ENST00000391258 106 ntBASIC-0.96□□□□□ -2.56
PAAF1Q9BRP4 snoU83B.1-201ENST00000517136 88 ntBASIC-0.96□□□□□ -2.56
PAAF1Q9BRP4 RNU6-776P-201ENST00000364403 104 ntBASIC-0.97□□□□□ -2.56
PAAF1Q9BRP4 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.97□□□□□ -2.56
PAAF1Q9BRP4 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.97□□□□□ -2.56
PAAF1Q9BRP4 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.98□□□□□ -2.57
PAAF1Q9BRP4 MIR378F-201ENST00000578143 78 ntBASIC-0.98□□□□□ -2.57
PAAF1Q9BRP4 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.99□□□□□ -2.57
PAAF1Q9BRP4 RNU6-649P-201ENST00000384463 107 ntBASIC-0.99□□□□□ -2.57
PAAF1Q9BRP4 AL353691.2-201ENST00000443795 59 ntBASIC-0.99□□□□□ -2.57
PAAF1Q9BRP4 RNU6-523P-201ENST00000516304 54 ntBASIC-0.99□□□□□ -2.57
PAAF1Q9BRP4 Y_RNA.565-201ENST00000384719 101 ntBASIC-1□□□□□ -2.57
PAAF1Q9BRP4 MIR587-201ENST00000384845 96 ntBASIC-1□□□□□ -2.57
PAAF1Q9BRP4 RNU6-696P-201ENST00000390834 107 ntBASIC-1□□□□□ -2.57
PAAF1Q9BRP4 MIR548Q-201ENST00000408404 100 ntBASIC-1□□□□□ -2.57
PAAF1Q9BRP4 AP002795.1-201ENST00000534879 84 ntBASIC-1□□□□□ -2.57
PAAF1Q9BRP4 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.01□□□□□ -2.57
PAAF1Q9BRP4 SNORD116-16-201ENST00000384533 92 ntBASIC-1.01□□□□□ -2.57
PAAF1Q9BRP4 SNORD19-201ENST00000391191 68 ntBASIC-1.01□□□□□ -2.57
PAAF1Q9BRP4 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.02□□□□□ -2.57
PAAF1Q9BRP4 RNU7-134P-201ENST00000458997 64 ntBASIC-1.03□□□□□ -2.57
PAAF1Q9BRP4 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.03□□□□□ -2.57
PAAF1Q9BRP4 MIR3115-201ENST00000577915 68 ntBASIC-1.03□□□□□ -2.57
PAAF1Q9BRP4 SNORA25.4-201ENST00000363666 124 ntBASIC-1.04□□□□□ -2.58
PAAF1Q9BRP4 RNA5SP461-201ENST00000516451 104 ntBASIC-1.04□□□□□ -2.58
PAAF1Q9BRP4 SNORA41B-201ENST00000384785 128 ntBASIC-1.05□□□□□ -2.58
PAAF1Q9BRP4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
PAAF1Q9BRP4 RNU6-1275P-201ENST00000391087 107 ntBASIC-1.05□□□□□ -2.58
PAAF1Q9BRP4 RNU6-92P-201ENST00000605893 104 ntBASIC-1.05□□□□□ -2.58
PAAF1Q9BRP4 RNA5SP26-201ENST00000362406 119 ntBASIC-1.06□□□□□ -2.58
PAAF1Q9BRP4 RNA5SP192-201ENST00000364404 120 ntBASIC-1.06□□□□□ -2.58
PAAF1Q9BRP4 MIR507-201ENST00000385234 94 ntBASIC-1.06□□□□□ -2.58
PAAF1Q9BRP4 RNU6-539P-201ENST00000516665 103 ntBASIC-1.06□□□□□ -2.58
PAAF1Q9BRP4 MIR6818-201ENST00000621576 65 ntBASIC-1.06□□□□□ -2.58
PAAF1Q9BRP4 RNU6-598P-201ENST00000364017 105 ntBASIC-1.07□□□□□ -2.58
PAAF1Q9BRP4 MIR4490-201ENST00000582647 84 ntBASIC-1.07□□□□□ -2.58
PAAF1Q9BRP4 MIR409-201ENST00000362237 79 ntBASIC-1.08□□□□□ -2.58
PAAF1Q9BRP4 U6.111-201ENST00000636093 83 ntBASIC-1.08□□□□□ -2.58
PAAF1Q9BRP4 MIR5683-201ENST00000636514 76 ntBASIC-1.08□□□□□ -2.58
PAAF1Q9BRP4 MIR29B1-201ENST00000385015 81 ntBASIC-1.09□□□□□ -2.58
PAAF1Q9BRP4 RPL35AP4-201ENST00000412007 102 ntBASIC-1.1□□□□□ -2.59
PAAF1Q9BRP4 U2.18-201ENST00000622185 84 ntBASIC-1.1□□□□□ -2.59
PAAF1Q9BRP4 MIR3165-201ENST00000579874 75 ntBASIC-1.11□□□□□ -2.59
PAAF1Q9BRP4 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.11□□□□□ -2.59
PAAF1Q9BRP4 AC005520.4-201ENST00000604337 90 ntBASIC-1.12□□□□□ -2.59
PAAF1Q9BRP4 MIR4320-201ENST00000636981 65 ntBASIC-1.12□□□□□ -2.59
PAAF1Q9BRP4 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.14□□□□□ -2.59
PAAF1Q9BRP4 MIR548AA1-201ENST00000384971 97 ntBASIC-1.14□□□□□ -2.59
PAAF1Q9BRP4 SNORD1B-201ENST00000363091 84 ntBASIC-1.15□□□□□ -2.59
PAAF1Q9BRP4 RNU6-995P-201ENST00000391244 107 ntBASIC-1.15□□□□□ -2.59
PAAF1Q9BRP4 SNORA25.5-201ENST00000363782 126 ntBASIC-1.16□□□□□ -2.6
PAAF1Q9BRP4 RNU6-576P-201ENST00000390854 102 ntBASIC-1.16□□□□□ -2.6
PAAF1Q9BRP4 MIR8485-201ENST00000401372 91 ntBASIC-1.16□□□□□ -2.6
PAAF1Q9BRP4 RNA5SP266-201ENST00000410273 108 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms