Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 RNU4-61P-201ENST00000411243 107 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 RNU6-542P-201ENST00000516405 103 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 MIR664A-201ENST00000626086 82 ntBASIC-1.08□□□□□ -2.58
SCN2AQ99250 SNORD45A-201ENST00000384512 84 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 uc_338.19-201ENST00000616808 99 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 U2.22-201ENST00000636441 106 ntBASIC-1.09□□□□□ -2.58
SCN2AQ99250 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR4441-201ENST00000582623 100 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR548V-201ENST00000584165 80 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.1□□□□□ -2.58
SCN2AQ99250 MIR147A-201ENST00000385079 72 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 MIR5588-201ENST00000581890 63 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 U4.2-201ENST00000618561 85 ntBASIC-1.1□□□□□ -2.59
SCN2AQ99250 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 AC018880.2-201ENST00000414265 201 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 RNU6-330P-201ENST00000363015 107 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 MIR548Q-201ENST00000408404 100 ntBASIC-1.11□□□□□ -2.59
SCN2AQ99250 RNA5SP461-201ENST00000516451 104 ntBASIC-1.12□□□□□ -2.59
SCN2AQ99250 RNU6-587P-201ENST00000391282 106 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 AL500527.2-201ENST00000454105 95 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 MIR4666B-201ENST00000578142 81 ntBASIC-1.13□□□□□ -2.59
SCN2AQ99250 RNA5SP173-201ENST00000364857 136 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 RNU6-604P-201ENST00000390917 100 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 MIR1245B-201ENST00000636115 69 ntBASIC-1.14□□□□□ -2.59
SCN2AQ99250 SNORD113-2-201ENST00000391082 72 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 MIR548AG1-201ENST00000579932 66 ntBASIC-1.15□□□□□ -2.59
SCN2AQ99250 SNORD116-16-201ENST00000384533 92 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.16□□□□□ -2.59
SCN2AQ99250 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 MIR507-201ENST00000385234 94 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 RNU7-134P-201ENST00000458997 64 ntBASIC-1.16□□□□□ -2.6
SCN2AQ99250 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 MIR548AA1-201ENST00000384971 97 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 SNORD19-201ENST00000391191 68 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 MIR5591-201ENST00000578248 65 ntBASIC-1.17□□□□□ -2.6
SCN2AQ99250 RNU6-820P-201ENST00000384273 107 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.18□□□□□ -2.6
SCN2AQ99250 IGLL4P-201ENST00000614590 133 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 MIR548C-201ENST00000384815 97 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 RNU6-630P-201ENST00000391258 106 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.18□□□□□ -2.6
SCN2AQ99250 MIR5582-201ENST00000579697 68 ntBASIC-1.19□□□□□ -2.6
SCN2AQ99250 MIR4712-201ENST00000583750 82 ntBASIC-1.19□□□□□ -2.6
SCN2AQ99250 SNORD1B-201ENST00000363091 84 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 RNU6-668P-201ENST00000364180 107 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 MIR4520-1-201ENST00000582609 70 ntBASIC-1.2□□□□□ -2.6
SCN2AQ99250 RNU6-164P-201ENST00000364604 103 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-787P-201ENST00000384032 107 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 MIR5683-201ENST00000636514 76 ntBASIC-1.21□□□□□ -2.6
SCN2AQ99250 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 MIR1255A-201ENST00000408338 113 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 RNU7-151P-201ENST00000516930 53 ntBASIC-1.22□□□□□ -2.6
SCN2AQ99250 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 RNU6-226P-201ENST00000363778 107 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.23□□□□□ -2.61
SCN2AQ99250 RNU6-732P-201ENST00000516033 103 ntBASIC-1.24□□□□□ -2.61
SCN2AQ99250 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR8485-201ENST00000401372 91 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 U2.18-201ENST00000622185 84 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR889-201ENST00000401280 79 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 MIR4484-201ENST00000582855 83 ntBASIC-1.25□□□□□ -2.61
SCN2AQ99250 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.26□□□□□ -2.61
SCN2AQ99250 MIR1246-201ENST00000636535 73 ntBASIC-1.26□□□□□ -2.61
SCN2AQ99250 MIR494-201ENST00000349529 81 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 RNU6-247P-201ENST00000362636 107 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 SNORA25.5-201ENST00000363782 126 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 RNU6-663P-201ENST00000391105 106 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.27□□□□□ -2.61
SCN2AQ99250 SNORA41B-201ENST00000384785 128 ntBASIC-1.28□□□□□ -2.61
SCN2AQ99250 RNU6-940P-201ENST00000363433 104 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 MIR3202-2-201ENST00000635980 79 ntBASIC-1.28□□□□□ -2.62
SCN2AQ99250 SNORD115-31-201ENST00000365318 82 ntBASIC-1.29□□□□□ -2.62
SCN2AQ99250 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNU6-119P-201ENST00000364882 107 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNU6-279P-201ENST00000391297 101 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 AC120024.2-201ENST00000576526 175 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 MIR3170-201ENST00000582699 77 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 AC005520.4-201ENST00000604337 90 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.3□□□□□ -2.62
SCN2AQ99250 RNA5SP26-201ENST00000362406 119 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 AC090616.4-201ENST00000448026 115 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 RNA5SP180-201ENST00000516181 101 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 AC062037.1-201ENST00000605302 128 ntBASIC-1.31□□□□□ -2.62
SCN2AQ99250 U7.4-201ENST00000614961 63 ntBASIC-1.32□□□□□ -2.62
SCN2AQ99250 SNORD60.1-201ENST00000362451 73 ntBASIC-1.32□□□□□ -2.62
SCN2AQ99250 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.33□□□□□ -2.62
SCN2AQ99250 RNY4P27-201ENST00000363341 96 ntBASIC-1.33□□□□□ -2.62
SCN2AQ99250 RNU6-92P-201ENST00000605893 104 ntBASIC-1.34□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms