Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.15□□□□□ -2.59
CCDC138Q96M89 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.15□□□□□ -2.59
CCDC138Q96M89 HLA-S-202ENST00000425174 53 ntBASIC-1.16□□□□□ -2.6
CCDC138Q96M89 MIR1245B-201ENST00000636115 69 ntBASIC-1.16□□□□□ -2.6
CCDC138Q96M89 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.17□□□□□ -2.6
CCDC138Q96M89 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.17□□□□□ -2.6
CCDC138Q96M89 RNU6-820P-201ENST00000384273 107 ntBASIC-1.17□□□□□ -2.6
CCDC138Q96M89 MIR8053-201ENST00000613344 75 ntBASIC-1.17□□□□□ -2.6
CCDC138Q96M89 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.18□□□□□ -2.6
CCDC138Q96M89 RNU6-982P-201ENST00000516216 102 ntBASIC-1.19□□□□□ -2.6
CCDC138Q96M89 AC091912.2-201ENST00000624798 167 ntBASIC-1.19□□□□□ -2.6
CCDC138Q96M89 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.2□□□□□ -2.6
CCDC138Q96M89 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.2□□□□□ -2.6
CCDC138Q96M89 MIR4712-201ENST00000583750 82 ntBASIC-1.2□□□□□ -2.6
CCDC138Q96M89 MTND4LP1-201ENST00000446263 157 ntBASIC-1.21□□□□□ -2.6
CCDC138Q96M89 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.21□□□□□ -2.6
CCDC138Q96M89 SNORD115-22-201ENST00000364456 82 ntBASIC-1.22□□□□□ -2.6
CCDC138Q96M89 SNORD54-201ENST00000459159 67 ntBASIC-1.22□□□□□ -2.6
CCDC138Q96M89 Y_RNA.53-201ENST00000362765 102 ntBASIC-1.23□□□□□ -2.61
CCDC138Q96M89 SNORD114-17-201ENST00000364699 75 ntBASIC-1.23□□□□□ -2.61
CCDC138Q96M89 MIR4666B-201ENST00000578142 81 ntBASIC-1.23□□□□□ -2.61
CCDC138Q96M89 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.24□□□□□ -2.61
CCDC138Q96M89 RNU6-983P-201ENST00000516004 103 ntBASIC-1.24□□□□□ -2.61
CCDC138Q96M89 RNA5SP170-201ENST00000517150 101 ntBASIC-1.24□□□□□ -2.61
CCDC138Q96M89 RNU6-431P-201ENST00000383874 107 ntBASIC-1.25□□□□□ -2.61
CCDC138Q96M89 SNORD64-201ENST00000386683 67 ntBASIC-1.25□□□□□ -2.61
CCDC138Q96M89 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.25□□□□□ -2.61
CCDC138Q96M89 RNU7-174P-201ENST00000516248 59 ntBASIC-1.26□□□□□ -2.61
CCDC138Q96M89 SCARNA18B-201ENST00000458806 135 ntBASIC-1.27□□□□□ -2.61
CCDC138Q96M89 RNU6-118P-201ENST00000516552 102 ntBASIC-1.27□□□□□ -2.61
CCDC138Q96M89 MIR664A-201ENST00000626086 82 ntBASIC-1.28□□□□□ -2.61
CCDC138Q96M89 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.29□□□□□ -2.62
CCDC138Q96M89 SNORD113.1-201ENST00000363280 73 ntBASIC-1.29□□□□□ -2.62
CCDC138Q96M89 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.3□□□□□ -2.62
CCDC138Q96M89 RNU6-668P-201ENST00000364180 107 ntBASIC-1.3□□□□□ -2.62
CCDC138Q96M89 MIR5591-201ENST00000578248 65 ntBASIC-1.3□□□□□ -2.62
CCDC138Q96M89 AC062037.1-201ENST00000605302 128 ntBASIC-1.3□□□□□ -2.62
CCDC138Q96M89 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.3□□□□□ -2.62
CCDC138Q96M89 MIR147A-201ENST00000385079 72 ntBASIC-1.31□□□□□ -2.62
CCDC138Q96M89 AC138207.3-201ENST00000585289 166 ntBASIC-1.31□□□□□ -2.62
CCDC138Q96M89 RNU6-70P-201ENST00000516438 60 ntBASIC-1.32□□□□□ -2.62
CCDC138Q96M89 MIR548AG1-201ENST00000579932 66 ntBASIC-1.32□□□□□ -2.62
CCDC138Q96M89 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 RNA5SP215-201ENST00000363440 122 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 RNU6-698P-201ENST00000363523 107 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 RNU6-34P-201ENST00000364874 107 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 SNORD45A-201ENST00000384512 84 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 MIR382-201ENST00000637119 76 ntBASIC-1.33□□□□□ -2.62
CCDC138Q96M89 SNORD115-33-201ENST00000363723 82 ntBASIC-1.34□□□□□ -2.62
CCDC138Q96M89 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.34□□□□□ -2.62
CCDC138Q96M89 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.34□□□□□ -2.62
CCDC138Q96M89 SNORA26.4-201ENST00000391188 123 ntBASIC-1.34□□□□□ -2.62
CCDC138Q96M89 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.34□□□□□ -2.62
CCDC138Q96M89 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.35□□□□□ -2.63
CCDC138Q96M89 MIR154-201ENST00000385243 84 ntBASIC-1.36□□□□□ -2.63
CCDC138Q96M89 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-1.36□□□□□ -2.63
CCDC138Q96M89 RNU6-787P-201ENST00000384032 107 ntBASIC-1.37□□□□□ -2.63
CCDC138Q96M89 RNU6-246P-201ENST00000384702 107 ntBASIC-1.38□□□□□ -2.63
CCDC138Q96M89 RNU6-587P-201ENST00000391282 106 ntBASIC-1.38□□□□□ -2.63
CCDC138Q96M89 MIR429-201ENST00000362106 83 ntBASIC-1.39□□□□□ -2.63
CCDC138Q96M89 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.39□□□□□ -2.63
CCDC138Q96M89 SNORD73B-201ENST00000364394 72 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 RNU6-895P-201ENST00000384125 103 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 MIR527-201ENST00000385244 85 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 U7.5-201ENST00000517224 61 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 MIR548V-201ENST00000584165 80 ntBASIC-1.4□□□□□ -2.63
CCDC138Q96M89 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.41□□□□□ -2.64
CCDC138Q96M89 RNU7-88P-201ENST00000458752 63 ntBASIC-1.41□□□□□ -2.64
CCDC138Q96M89 SNORD63.1-201ENST00000516178 80 ntBASIC-1.41□□□□□ -2.64
CCDC138Q96M89 U4.4-201ENST00000620626 117 ntBASIC-1.41□□□□□ -2.64
CCDC138Q96M89 RNU6-458P-201ENST00000384179 107 ntBASIC-1.42□□□□□ -2.64
CCDC138Q96M89 U6.58-201ENST00000613107 107 ntBASIC-1.42□□□□□ -2.64
CCDC138Q96M89 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.43□□□□□ -2.64
CCDC138Q96M89 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 RNA5SP173-201ENST00000364857 136 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 SNORD113-2-201ENST00000391082 72 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 AL353691.2-201ENST00000443795 59 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 RNU6-980P-201ENST00000516925 103 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 snoU83B.1-201ENST00000517136 88 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 MIR4770-201ENST00000579149 58 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 MIR3134-201ENST00000579433 74 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.44□□□□□ -2.64
CCDC138Q96M89 MIR630-201ENST00000384957 97 ntBASIC-1.45□□□□□ -2.64
CCDC138Q96M89 MIR3202-2-201ENST00000635980 79 ntBASIC-1.45□□□□□ -2.64
CCDC138Q96M89 SNORA26.2-201ENST00000390922 122 ntBASIC-1.47□□□□□ -2.64
CCDC138Q96M89 MIR8485-201ENST00000401372 91 ntBASIC-1.47□□□□□ -2.64
CCDC138Q96M89 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.47□□□□□ -2.64
CCDC138Q96M89 U7.4-201ENST00000614961 63 ntBASIC-1.47□□□□□ -2.64
CCDC138Q96M89 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.48□□□□□ -2.65
CCDC138Q96M89 RNU6-411P-201ENST00000384451 107 ntBASIC-1.48□□□□□ -2.65
CCDC138Q96M89 SNORD18.1-201ENST00000363807 70 ntBASIC-1.49□□□□□ -2.65
CCDC138Q96M89 RNU6-687P-201ENST00000516443 89 ntBASIC-1.49□□□□□ -2.65
CCDC138Q96M89 RNY4P29-201ENST00000410801 97 ntBASIC-1.5□□□□□ -2.65
CCDC138Q96M89 RNU7-134P-201ENST00000458997 64 ntBASIC-1.51□□□□□ -2.65
CCDC138Q96M89 RNU6-1191P-201ENST00000516799 107 ntBASIC-1.51□□□□□ -2.65
CCDC138Q96M89 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.52□□□□□ -2.65
CCDC138Q96M89 SNORD115-31-201ENST00000365318 82 ntBASIC-1.52□□□□□ -2.65
CCDC138Q96M89 SNORD116-24-201ENST00000384549 92 ntBASIC-1.52□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms