Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MIR1285-2-201ENST00000408311 88 ntBASIC-1.61□□□□□ -2.67
VMP1Q96GC9 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.61□□□□□ -2.67
VMP1Q96GC9 SNORD113.1-201ENST00000363280 73 ntBASIC-1.62□□□□□ -2.67
VMP1Q96GC9 AC090616.4-201ENST00000448026 115 ntBASIC-1.62□□□□□ -2.67
VMP1Q96GC9 IGLL4P-201ENST00000614590 133 ntBASIC-1.62□□□□□ -2.67
VMP1Q96GC9 AC091912.2-201ENST00000624798 167 ntBASIC-1.62□□□□□ -2.67
VMP1Q96GC9 RNU6-226P-201ENST00000363778 107 ntBASIC-1.63□□□□□ -2.67
VMP1Q96GC9 MIR630-201ENST00000384957 97 ntBASIC-1.63□□□□□ -2.67
VMP1Q96GC9 AL603908.1-201ENST00000406098 201 ntBASIC-1.63□□□□□ -2.67
VMP1Q96GC9 MIR1246-201ENST00000636535 73 ntBASIC-1.63□□□□□ -2.67
VMP1Q96GC9 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.64□□□□□ -2.67
VMP1Q96GC9 RNU6-598P-201ENST00000364017 105 ntBASIC-1.64□□□□□ -2.67
VMP1Q96GC9 RNY1P1-201ENST00000364372 112 ntBASIC-1.64□□□□□ -2.67
VMP1Q96GC9 MIR5588-201ENST00000581890 63 ntBASIC-1.64□□□□□ -2.67
VMP1Q96GC9 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.65□□□□□ -2.67
VMP1Q96GC9 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.65□□□□□ -2.67
VMP1Q96GC9 SNORD113-2-201ENST00000391082 72 ntBASIC-1.65□□□□□ -2.67
VMP1Q96GC9 MIR8485-201ENST00000401372 91 ntBASIC-1.65□□□□□ -2.67
VMP1Q96GC9 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 RNU6-49P-201ENST00000384256 107 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 SNORD45A-201ENST00000384512 84 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 RNU6-630P-201ENST00000391258 106 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 MIR1468-201ENST00000410600 86 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 RNU6-168P-201ENST00000516189 101 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 MIR6874-201ENST00000635894 71 ntBASIC-1.66□□□□□ -2.68
VMP1Q96GC9 MIR365A-201ENST00000362260 87 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 RNA5SP173-201ENST00000364857 136 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 MIR889-201ENST00000401280 79 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 RNU6-789P-201ENST00000517105 102 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 MIR664A-201ENST00000626086 82 ntBASIC-1.67□□□□□ -2.68
VMP1Q96GC9 RNU6-979P-201ENST00000383896 107 ntBASIC-1.68□□□□□ -2.68
VMP1Q96GC9 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.68□□□□□ -2.68
VMP1Q96GC9 MIR4441-201ENST00000582623 100 ntBASIC-1.68□□□□□ -2.68
VMP1Q96GC9 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.69□□□□□ -2.68
VMP1Q96GC9 RNU6-44P-201ENST00000384045 107 ntBASIC-1.69□□□□□ -2.68
VMP1Q96GC9 MIR5591-201ENST00000578248 65 ntBASIC-1.69□□□□□ -2.68
VMP1Q96GC9 U2.18-201ENST00000622185 84 ntBASIC-1.69□□□□□ -2.68
VMP1Q96GC9 SNORD116-16-201ENST00000384533 92 ntBASIC-1.7□□□□□ -2.68
VMP1Q96GC9 RNA5SP89-201ENST00000410300 108 ntBASIC-1.7□□□□□ -2.68
VMP1Q96GC9 AC018880.2-201ENST00000414265 201 ntBASIC-1.7□□□□□ -2.68
VMP1Q96GC9 RNU6-608P-201ENST00000383927 104 ntBASIC-1.71□□□□□ -2.68
VMP1Q96GC9 U4.2-201ENST00000618561 85 ntBASIC-1.71□□□□□ -2.68
VMP1Q96GC9 RNU7-171P-201ENST00000459581 62 ntBASIC-1.72□□□□□ -2.68
VMP1Q96GC9 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.73□□□□□ -2.69
VMP1Q96GC9 MIR520D-201ENST00000385002 87 ntBASIC-1.73□□□□□ -2.69
VMP1Q96GC9 MIR6502-201ENST00000617296 76 ntBASIC-1.73□□□□□ -2.69
VMP1Q96GC9 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 MIR548AA1-201ENST00000384971 97 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 MIR4712-201ENST00000583750 82 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 MIR1245B-201ENST00000636115 69 ntBASIC-1.74□□□□□ -2.69
VMP1Q96GC9 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.75□□□□□ -2.69
VMP1Q96GC9 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.76□□□□□ -2.69
VMP1Q96GC9 SNORA41B-201ENST00000384785 128 ntBASIC-1.76□□□□□ -2.69
VMP1Q96GC9 RNU6-406P-201ENST00000516470 107 ntBASIC-1.76□□□□□ -2.69
VMP1Q96GC9 MIR23C-201ENST00000579846 100 ntBASIC-1.76□□□□□ -2.69
VMP1Q96GC9 MIR548AI-201ENST00000579940 88 ntBASIC-1.76□□□□□ -2.69
VMP1Q96GC9 MIR154-201ENST00000385243 84 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 RNU6-70P-201ENST00000516438 60 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 MIR4770-201ENST00000579149 58 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 MIR4520-1-201ENST00000582609 70 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 MIR3170-201ENST00000582699 77 ntBASIC-1.77□□□□□ -2.69
VMP1Q96GC9 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.78□□□□□ -2.69
VMP1Q96GC9 RNU6-895P-201ENST00000384125 103 ntBASIC-1.78□□□□□ -2.69
VMP1Q96GC9 RNU6-400P-201ENST00000391173 106 ntBASIC-1.78□□□□□ -2.69
VMP1Q96GC9 RNY4P30-201ENST00000410216 95 ntBASIC-1.78□□□□□ -2.69
VMP1Q96GC9 RNU6-79P-201ENST00000362511 107 ntBASIC-1.79□□□□□ -2.7
VMP1Q96GC9 SNORD1B-201ENST00000363091 84 ntBASIC-1.79□□□□□ -2.7
VMP1Q96GC9 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.79□□□□□ -2.7
VMP1Q96GC9 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.79□□□□□ -2.7
VMP1Q96GC9 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.8□□□□□ -2.7
VMP1Q96GC9 RNU6-242P-201ENST00000384359 107 ntBASIC-1.81□□□□□ -2.7
VMP1Q96GC9 SNORD116-24-201ENST00000384549 92 ntBASIC-1.81□□□□□ -2.7
VMP1Q96GC9 RNU6-540P-201ENST00000384622 101 ntBASIC-1.82□□□□□ -2.7
VMP1Q96GC9 MIR494-201ENST00000349529 81 ntBASIC-1.83□□□□□ -2.7
VMP1Q96GC9 RNU6-247P-201ENST00000362636 107 ntBASIC-1.83□□□□□ -2.7
VMP1Q96GC9 RNU6-995P-201ENST00000391244 107 ntBASIC-1.83□□□□□ -2.7
VMP1Q96GC9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.83□□□□□ -2.7
VMP1Q96GC9 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.84□□□□□ -2.7
VMP1Q96GC9 RNU6-153P-201ENST00000364422 104 ntBASIC-1.85□□□□□ -2.71
VMP1Q96GC9 SNORD114-3-201ENST00000364969 75 ntBASIC-1.85□□□□□ -2.71
VMP1Q96GC9 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.85□□□□□ -2.71
VMP1Q96GC9 MIR450A2-201ENST00000385022 100 ntBASIC-1.85□□□□□ -2.71
VMP1Q96GC9 SNORD115-31-201ENST00000365318 82 ntBASIC-1.86□□□□□ -2.71
VMP1Q96GC9 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.86□□□□□ -2.71
VMP1Q96GC9 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.86□□□□□ -2.71
VMP1Q96GC9 MIR3134-201ENST00000579433 74 ntBASIC-1.86□□□□□ -2.71
VMP1Q96GC9 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.86□□□□□ -2.71
VMP1Q96GC9 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.87□□□□□ -2.71
VMP1Q96GC9 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.87□□□□□ -2.71
VMP1Q96GC9 RNU7-151P-201ENST00000516930 53 ntBASIC-1.87□□□□□ -2.71
VMP1Q96GC9 MIR4666B-201ENST00000578142 81 ntBASIC-1.87□□□□□ -2.71
VMP1Q96GC9 RNU6-983P-201ENST00000516004 103 ntBASIC-1.88□□□□□ -2.71
VMP1Q96GC9 RNU6-542P-201ENST00000516405 103 ntBASIC-1.88□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms