Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 SNORD19-201ENST00000391191 68 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 AC114755.3-201ENST00000481111 251 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 RNU6-1238P-201ENST00000517215 102 ntBASIC0.37□□□□□ -2.35
CHFRQ96EP1 RNA5SP257-201ENST00000363023 116 ntBASIC0.36□□□□□ -2.35
CHFRQ96EP1 MIR124-2-201ENST00000385081 109 ntBASIC0.36□□□□□ -2.35
CHFRQ96EP1 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
CHFRQ96EP1 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.36□□□□□ -2.35
CHFRQ96EP1 MIR6854-201ENST00000614935 69 ntBASIC0.36□□□□□ -2.35
CHFRQ96EP1 Y_RNA.433-201ENST00000384089 102 ntBASIC0.35□□□□□ -2.35
CHFRQ96EP1 MIR548H4-201ENST00000408689 111 ntBASIC0.35□□□□□ -2.35
CHFRQ96EP1 SNORA62.5-201ENST00000516634 120 ntBASIC0.35□□□□□ -2.35
CHFRQ96EP1 AC104408.1-201ENST00000605241 170 ntBASIC0.35□□□□□ -2.35
CHFRQ96EP1 MIR655-201ENST00000362159 97 ntBASIC0.34□□□□□ -2.36
CHFRQ96EP1 MIR148A-201ENST00000362215 68 ntBASIC0.34□□□□□ -2.36
CHFRQ96EP1 AC244250.2-201ENST00000418731 148 ntBASIC0.34□□□□□ -2.36
CHFRQ96EP1 MIR6718-201ENST00000616153 80 ntBASIC0.34□□□□□ -2.36
CHFRQ96EP1 Y_RNA.178-201ENST00000363832 102 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 RNU6-1204P-201ENST00000363948 107 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 RNU6-1008P-201ENST00000384160 104 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 RNU6-530P-201ENST00000391180 107 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 AC023932.2-201ENST00000603176 175 ntBASIC0.33□□□□□ -2.36
CHFRQ96EP1 SNORD45.2-201ENST00000363552 72 ntBASIC0.32□□□□□ -2.36
CHFRQ96EP1 RNU6-724P-201ENST00000390958 105 ntBASIC0.32□□□□□ -2.36
CHFRQ96EP1 AP002795.1-201ENST00000534879 84 ntBASIC0.32□□□□□ -2.36
CHFRQ96EP1 MIR593-201ENST00000384856 100 ntBASIC0.31□□□□□ -2.36
CHFRQ96EP1 RNU6-1111P-201ENST00000391118 107 ntBASIC0.31□□□□□ -2.36
CHFRQ96EP1 MIR892B-201ENST00000401279 77 ntBASIC0.31□□□□□ -2.36
CHFRQ96EP1 MIR4280-201ENST00000582178 76 ntBASIC0.31□□□□□ -2.36
CHFRQ96EP1 MIR548Q-201ENST00000408404 100 ntBASIC0.3□□□□□ -2.36
CHFRQ96EP1 RNU6-721P-201ENST00000410155 105 ntBASIC0.3□□□□□ -2.36
CHFRQ96EP1 RNU7-165P-201ENST00000458864 60 ntBASIC0.3□□□□□ -2.36
CHFRQ96EP1 RNU6-822P-201ENST00000362707 106 ntBASIC0.29□□□□□ -2.36
CHFRQ96EP1 Y_RNA.321-201ENST00000365149 102 ntBASIC0.29□□□□□ -2.36
CHFRQ96EP1 RNU6-901P-201ENST00000384593 106 ntBASIC0.29□□□□□ -2.36
CHFRQ96EP1 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.28□□□□□ -2.36
CHFRQ96EP1 MIR145-201ENST00000384967 88 ntBASIC0.28□□□□□ -2.36
CHFRQ96EP1 MIR1468-201ENST00000410600 86 ntBASIC0.28□□□□□ -2.36
CHFRQ96EP1 MIR4315-1-201ENST00000636800 73 ntBASIC0.28□□□□□ -2.36
CHFRQ96EP1 MIR4315-2-201ENST00000640925 73 ntBASIC0.28□□□□□ -2.36
CHFRQ96EP1 RNU6-1233P-201ENST00000362922 102 ntBASIC0.27□□□□□ -2.37
CHFRQ96EP1 RNU6-59P-201ENST00000384787 107 ntBASIC0.27□□□□□ -2.37
CHFRQ96EP1 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
CHFRQ96EP1 AL445193.1-201ENST00000441183 141 ntBASIC0.26□□□□□ -2.37
CHFRQ96EP1 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.26□□□□□ -2.37
CHFRQ96EP1 SNORA27.2-201ENST00000363365 126 ntBASIC0.25□□□□□ -2.37
CHFRQ96EP1 MIR610-201ENST00000385139 96 ntBASIC0.25□□□□□ -2.37
CHFRQ96EP1 MIR4743-201ENST00000584576 69 ntBASIC0.25□□□□□ -2.37
CHFRQ96EP1 RNA5SP214-201ENST00000363378 118 ntBASIC0.24□□□□□ -2.37
CHFRQ96EP1 SNORD38.3-201ENST00000516599 73 ntBASIC0.24□□□□□ -2.37
CHFRQ96EP1 Y_RNA.699-201ENST00000516803 93 ntBASIC0.24□□□□□ -2.37
CHFRQ96EP1 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CHFRQ96EP1 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
CHFRQ96EP1 RNU6-608P-201ENST00000383927 104 ntBASIC0.23□□□□□ -2.37
CHFRQ96EP1 RNU7-159P-201ENST00000459284 62 ntBASIC0.23□□□□□ -2.37
CHFRQ96EP1 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.23□□□□□ -2.37
CHFRQ96EP1 SNORD114-5-201ENST00000362928 70 ntBASIC0.22□□□□□ -2.37
CHFRQ96EP1 SNORD114-9-201ENST00000364370 72 ntBASIC0.22□□□□□ -2.37
CHFRQ96EP1 MIR6851-201ENST00000617060 67 ntBASIC0.22□□□□□ -2.37
CHFRQ96EP1 U6.103-201ENST00000637085 61 ntBASIC0.22□□□□□ -2.37
CHFRQ96EP1 MIR4426-201ENST00000640330 63 ntBASIC0.21□□□□□ -2.38
CHFRQ96EP1 RNU6-929P-201ENST00000384429 107 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 SNORA26.4-201ENST00000391188 123 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 RNY3P8-201ENST00000411366 126 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 RNA5SP285-201ENST00000516619 119 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 MIR5683-201ENST00000636514 76 ntBASIC0.2□□□□□ -2.38
CHFRQ96EP1 RNU6-1326P-201ENST00000391262 107 ntBASIC0.19□□□□□ -2.38
CHFRQ96EP1 AL590491.3-201ENST00000610731 82 ntBASIC0.19□□□□□ -2.38
CHFRQ96EP1 RNU6-361P-201ENST00000364454 107 ntBASIC0.18□□□□□ -2.38
CHFRQ96EP1 SNORD49B-201ENST00000365172 72 ntBASIC0.18□□□□□ -2.38
CHFRQ96EP1 SNORD18.2-201ENST00000459604 70 ntBASIC0.18□□□□□ -2.38
CHFRQ96EP1 MIR202-201ENST00000362219 110 ntBASIC0.17□□□□□ -2.38
CHFRQ96EP1 SNORD74.6-201ENST00000364796 70 ntBASIC0.17□□□□□ -2.38
CHFRQ96EP1 Y_RNA.345-201ENST00000365384 92 ntBASIC0.17□□□□□ -2.38
CHFRQ96EP1 AL353691.2-201ENST00000443795 59 ntBASIC0.17□□□□□ -2.38
CHFRQ96EP1 RNA5SP169-201ENST00000517268 117 ntBASIC0.17□□□□□ -2.38
CHFRQ96EP1 SNORD115-33-201ENST00000363723 82 ntBASIC0.16□□□□□ -2.38
CHFRQ96EP1 RNU6-1047P-201ENST00000364418 107 ntBASIC0.16□□□□□ -2.38
CHFRQ96EP1 RNU6-46P-201ENST00000383860 107 ntBASIC0.16□□□□□ -2.38
CHFRQ96EP1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.16□□□□□ -2.38
CHFRQ96EP1 SNORD22.1-201ENST00000516331 125 ntBASIC0.16□□□□□ -2.38
CHFRQ96EP1 MIR5190-201ENST00000581537 80 ntBASIC0.16□□□□□ -2.38
CHFRQ96EP1 Y_RNA.206-201ENST00000364136 102 ntBASIC0.15□□□□□ -2.39
CHFRQ96EP1 MIR518B-201ENST00000385127 83 ntBASIC0.14□□□□□ -2.39
CHFRQ96EP1 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
CHFRQ96EP1 RNA5SP66-201ENST00000517178 101 ntBASIC0.14□□□□□ -2.39
CHFRQ96EP1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.14□□□□□ -2.39
CHFRQ96EP1 MIR4317-201ENST00000637586 65 ntBASIC0.14□□□□□ -2.39
CHFRQ96EP1 SNORA17.4-201ENST00000391287 132 ntBASIC0.12□□□□□ -2.39
CHFRQ96EP1 RPL35AP4-201ENST00000412007 102 ntBASIC0.12□□□□□ -2.39
CHFRQ96EP1 SNORD114-17-201ENST00000364699 75 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 SNORD75.1-201ENST00000408373 60 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 RNU6-300P-201ENST00000459080 104 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 MIR4290-201ENST00000583807 95 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 AC138207.3-201ENST00000585289 166 ntBASIC0.11□□□□□ -2.39
CHFRQ96EP1 Y_RNA.189-201ENST00000363959 112 ntBASIC0.1□□□□□ -2.39
CHFRQ96EP1 AC093726.3-201ENST00000637588 150 ntBASIC0.1□□□□□ -2.39
CHFRQ96EP1 AP000533.3-201ENST00000447704 118 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 358.2 ms