Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MIR8053-201ENST00000613344 75 ntBASIC-2.11□□□□□ -2.75
NUDCD3Q8IVD9 RNA5SP215-201ENST00000363440 122 ntBASIC-2.12□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-640P-201ENST00000363693 105 ntBASIC-2.12□□□□□ -2.75
NUDCD3Q8IVD9 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.12□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-844P-201ENST00000517175 102 ntBASIC-2.12□□□□□ -2.75
NUDCD3Q8IVD9 SNORD113.1-201ENST00000363280 73 ntBASIC-2.13□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-755P-201ENST00000364400 103 ntBASIC-2.13□□□□□ -2.75
NUDCD3Q8IVD9 SNORD113-2-201ENST00000391082 72 ntBASIC-2.13□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-400P-201ENST00000391173 106 ntBASIC-2.13□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-79P-201ENST00000362511 107 ntBASIC-2.15□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-32P-201ENST00000383948 107 ntBASIC-2.15□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-13P-201ENST00000384248 107 ntBASIC-2.15□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-12P-201ENST00000384604 107 ntBASIC-2.15□□□□□ -2.75
NUDCD3Q8IVD9 RNU6-41P-201ENST00000384741 107 ntBASIC-2.15□□□□□ -2.75
NUDCD3Q8IVD9 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 SNORD45A-201ENST00000384512 84 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 SNORD116-16-201ENST00000384533 92 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.16□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.17□□□□□ -2.76
NUDCD3Q8IVD9 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.17□□□□□ -2.76
NUDCD3Q8IVD9 U4.2-201ENST00000618561 85 ntBASIC-2.17□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.17-201ENST00000362433 111 ntBASIC-2.18□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.607-201ENST00000410597 98 ntBASIC-2.18□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.18□□□□□ -2.76
NUDCD3Q8IVD9 MIR3170-201ENST00000582699 77 ntBASIC-2.18□□□□□ -2.76
NUDCD3Q8IVD9 MIR664A-201ENST00000626086 82 ntBASIC-2.18□□□□□ -2.76
NUDCD3Q8IVD9 SNORA63.4-201ENST00000362763 126 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 RNA5SP173-201ENST00000364857 136 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 MIR548AA1-201ENST00000384971 97 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 MIR23C-201ENST00000579846 100 ntBASIC-2.19□□□□□ -2.76
NUDCD3Q8IVD9 RNU6-315P-201ENST00000362666 107 ntBASIC-2.2□□□□□ -2.76
NUDCD3Q8IVD9 RNU6-1134P-201ENST00000365156 101 ntBASIC-2.21□□□□□ -2.76
NUDCD3Q8IVD9 SNORA41B-201ENST00000384785 128 ntBASIC-2.21□□□□□ -2.76
NUDCD3Q8IVD9 MIR3910-1-201ENST00000580936 111 ntBASIC-2.21□□□□□ -2.76
NUDCD3Q8IVD9 RNU6-147P-201ENST00000383983 107 ntBASIC-2.22□□□□□ -2.76
NUDCD3Q8IVD9 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.23□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.73-201ENST00000362910 113 ntBASIC-2.23□□□□□ -2.77
NUDCD3Q8IVD9 SNORD114-3-201ENST00000364969 75 ntBASIC-2.23□□□□□ -2.77
NUDCD3Q8IVD9 SNORD1B-201ENST00000363091 84 ntBASIC-2.24□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.24□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.593-201ENST00000410292 98 ntBASIC-2.24□□□□□ -2.77
NUDCD3Q8IVD9 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.25□□□□□ -2.77
NUDCD3Q8IVD9 RNU6-247P-201ENST00000362636 107 ntBASIC-2.25□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.543-201ENST00000384649 107 ntBASIC-2.25□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.629-201ENST00000411368 105 ntBASIC-2.25□□□□□ -2.77
NUDCD3Q8IVD9 RNA5SP86-201ENST00000390869 98 ntBASIC-2.26□□□□□ -2.77
NUDCD3Q8IVD9 MIR548H1-201ENST00000408610 102 ntBASIC-2.26□□□□□ -2.77
NUDCD3Q8IVD9 IGLL4P-201ENST00000614590 133 ntBASIC-2.26□□□□□ -2.77
NUDCD3Q8IVD9 Y_RNA.316-201ENST00000365118 111 ntBASIC-2.27□□□□□ -2.77
NUDCD3Q8IVD9 AC120024.2-201ENST00000576526 175 ntBASIC-2.27□□□□□ -2.77
NUDCD3Q8IVD9 MIR5588-201ENST00000581890 63 ntBASIC-2.27□□□□□ -2.77
NUDCD3Q8IVD9 RNY1P1-201ENST00000364372 112 ntBASIC-2.28□□□□□ -2.77
NUDCD3Q8IVD9 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.29□□□□□ -2.78
NUDCD3Q8IVD9 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.29□□□□□ -2.78
NUDCD3Q8IVD9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.29□□□□□ -2.78
NUDCD3Q8IVD9 SNORD113-1-201ENST00000365321 69 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-1241P-201ENST00000384536 107 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-540P-201ENST00000384622 101 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-258P-201ENST00000390884 101 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-995P-201ENST00000391244 107 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.3□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-563P-201ENST00000364872 108 ntBASIC-2.31□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-1131P-201ENST00000364955 107 ntBASIC-2.31□□□□□ -2.78
NUDCD3Q8IVD9 Y_RNA.313-201ENST00000365095 103 ntBASIC-2.31□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-979P-201ENST00000383896 107 ntBASIC-2.32□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-695P-201ENST00000391157 104 ntBASIC-2.32□□□□□ -2.78
NUDCD3Q8IVD9 RNU7-151P-201ENST00000516930 53 ntBASIC-2.32□□□□□ -2.78
NUDCD3Q8IVD9 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.33□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-49P-201ENST00000384256 107 ntBASIC-2.33□□□□□ -2.78
NUDCD3Q8IVD9 MIR154-201ENST00000385243 84 ntBASIC-2.33□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-983P-201ENST00000516004 103 ntBASIC-2.33□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-215P-201ENST00000365169 102 ntBASIC-2.34□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-895P-201ENST00000384125 103 ntBASIC-2.34□□□□□ -2.78
NUDCD3Q8IVD9 RNU6-70P-201ENST00000516438 60 ntBASIC-2.34□□□□□ -2.78
NUDCD3Q8IVD9 SNORD116-24-201ENST00000384549 92 ntBASIC-2.35□□□□□ -2.79
NUDCD3Q8IVD9 SNORD20-201ENST00000384550 80 ntBASIC-2.35□□□□□ -2.79
NUDCD3Q8IVD9 MIR579-201ENST00000385221 98 ntBASIC-2.35□□□□□ -2.79
NUDCD3Q8IVD9 RNU6-919P-201ENST00000516731 104 ntBASIC-2.35□□□□□ -2.79
NUDCD3Q8IVD9 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.35□□□□□ -2.79
NUDCD3Q8IVD9 RNU6-172P-201ENST00000411000 93 ntBASIC-2.36□□□□□ -2.79
NUDCD3Q8IVD9 MIR4712-201ENST00000583750 82 ntBASIC-2.36□□□□□ -2.79
NUDCD3Q8IVD9 RNY4P27-201ENST00000363341 96 ntBASIC-2.37□□□□□ -2.79
NUDCD3Q8IVD9 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.37□□□□□ -2.79
NUDCD3Q8IVD9 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.37□□□□□ -2.79
NUDCD3Q8IVD9 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 AL606753.1-201ENST00000427435 87 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 RNU7-171P-201ENST00000459581 62 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 SNORD63.2-201ENST00000516303 64 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 MIR4723-201ENST00000585070 81 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 MIR1245B-201ENST00000636115 69 ntBASIC-2.38□□□□□ -2.79
NUDCD3Q8IVD9 MIR487B-201ENST00000385021 84 ntBASIC-2.39□□□□□ -2.79
NUDCD3Q8IVD9 SNORA27.2-201ENST00000363365 126 ntBASIC-2.4□□□□□ -2.79
NUDCD3Q8IVD9 RNU6-669P-201ENST00000365575 107 ntBASIC-2.4□□□□□ -2.79
NUDCD3Q8IVD9 MIR1207-201ENST00000408249 87 ntBASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms