Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 MIR1297-201ENST00000637311 77 ntBASIC-1.52□□□□□ -2.65
PRPF39Q86UA1 RNA5SP192-201ENST00000364404 120 ntBASIC-1.53□□□□□ -2.65
PRPF39Q86UA1 MIR1468-201ENST00000410600 86 ntBASIC-1.53□□□□□ -2.65
PRPF39Q86UA1 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.53□□□□□ -2.65
PRPF39Q86UA1 AL606753.1-201ENST00000427435 87 ntBASIC-1.53□□□□□ -2.65
PRPF39Q86UA1 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 SNORD113-1-201ENST00000365321 69 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 AC018880.2-201ENST00000414265 201 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 HLA-S-202ENST00000425174 53 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 MIR5591-201ENST00000578248 65 ntBASIC-1.54□□□□□ -2.66
PRPF39Q86UA1 MIR429-201ENST00000362106 83 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 RNU6-215P-201ENST00000365169 102 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 SNORD116-16-201ENST00000384533 92 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 MIR3170-201ENST00000582699 77 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 MIR198-201ENST00000637333 62 ntBASIC-1.55□□□□□ -2.66
PRPF39Q86UA1 RNU6-258P-201ENST00000390884 101 ntBASIC-1.56□□□□□ -2.66
PRPF39Q86UA1 MIR5588-201ENST00000581890 63 ntBASIC-1.56□□□□□ -2.66
PRPF39Q86UA1 MIR8053-201ENST00000613344 75 ntBASIC-1.56□□□□□ -2.66
PRPF39Q86UA1 SNORD1B-201ENST00000363091 84 ntBASIC-1.57□□□□□ -2.66
PRPF39Q86UA1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.57□□□□□ -2.66
PRPF39Q86UA1 RNY1P1-201ENST00000364372 112 ntBASIC-1.57□□□□□ -2.66
PRPF39Q86UA1 IGLL4P-201ENST00000614590 133 ntBASIC-1.57□□□□□ -2.66
PRPF39Q86UA1 RNU6-79P-201ENST00000362511 107 ntBASIC-1.58□□□□□ -2.66
PRPF39Q86UA1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.58□□□□□ -2.66
PRPF39Q86UA1 RNU6-979P-201ENST00000383896 107 ntBASIC-1.58□□□□□ -2.66
PRPF39Q86UA1 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.58□□□□□ -2.66
PRPF39Q86UA1 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.58□□□□□ -2.66
PRPF39Q86UA1 RNU6-44P-201ENST00000384045 107 ntBASIC-1.59□□□□□ -2.66
PRPF39Q86UA1 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.59□□□□□ -2.66
PRPF39Q86UA1 RNU6-563P-201ENST00000364872 108 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 SNORD116-24-201ENST00000384549 92 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 MIR601-201ENST00000385256 79 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 RNA5SP89-201ENST00000410300 108 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 RNU6-919P-201ENST00000516731 104 ntBASIC-1.6□□□□□ -2.67
PRPF39Q86UA1 MIR548AA1-201ENST00000384971 97 ntBASIC-1.61□□□□□ -2.67
PRPF39Q86UA1 MIR579-201ENST00000385221 98 ntBASIC-1.61□□□□□ -2.67
PRPF39Q86UA1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.62□□□□□ -2.67
PRPF39Q86UA1 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.62□□□□□ -2.67
PRPF39Q86UA1 MIR4712-201ENST00000583750 82 ntBASIC-1.62□□□□□ -2.67
PRPF39Q86UA1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 SNORD115-31-201ENST00000365318 82 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 RNU6-70P-201ENST00000516438 60 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 AC120024.2-201ENST00000576526 175 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 MIR4770-201ENST00000579149 58 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.63□□□□□ -2.67
PRPF39Q86UA1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.64□□□□□ -2.67
PRPF39Q86UA1 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.64□□□□□ -2.67
PRPF39Q86UA1 RNU7-151P-201ENST00000516930 53 ntBASIC-1.64□□□□□ -2.67
PRPF39Q86UA1 RNU6-400P-201ENST00000391173 106 ntBASIC-1.65□□□□□ -2.67
PRPF39Q86UA1 RNU7-171P-201ENST00000459581 62 ntBASIC-1.65□□□□□ -2.67
PRPF39Q86UA1 MIR494-201ENST00000349529 81 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 RNU6-247P-201ENST00000362636 107 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 MIR154-201ENST00000385243 84 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 RNA5SP86-201ENST00000390869 98 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 MIR3134-201ENST00000579433 74 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.66□□□□□ -2.68
PRPF39Q86UA1 RNY4P30-201ENST00000410216 95 ntBASIC-1.67□□□□□ -2.68
PRPF39Q86UA1 RNU6-172P-201ENST00000411000 93 ntBASIC-1.67□□□□□ -2.68
PRPF39Q86UA1 MIR1245B-201ENST00000636115 69 ntBASIC-1.67□□□□□ -2.68
PRPF39Q86UA1 RNU6-895P-201ENST00000384125 103 ntBASIC-1.68□□□□□ -2.68
PRPF39Q86UA1 MIR487B-201ENST00000385021 84 ntBASIC-1.68□□□□□ -2.68
PRPF39Q86UA1 MIR7978-201ENST00000636158 59 ntBASIC-1.68□□□□□ -2.68
PRPF39Q86UA1 RNA5SP173-201ENST00000364857 136 ntBASIC-1.69□□□□□ -2.68
PRPF39Q86UA1 MIR548H1-201ENST00000408610 102 ntBASIC-1.69□□□□□ -2.68
PRPF39Q86UA1 SNORD63.2-201ENST00000516303 64 ntBASIC-1.69□□□□□ -2.68
PRPF39Q86UA1 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.69□□□□□ -2.68
PRPF39Q86UA1 RNU6-974P-201ENST00000384099 108 ntBASIC-1.7□□□□□ -2.68
PRPF39Q86UA1 RNU6-669P-201ENST00000365575 107 ntBASIC-1.71□□□□□ -2.68
PRPF39Q86UA1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.72□□□□□ -2.68
PRPF39Q86UA1 RNU6-995P-201ENST00000391244 107 ntBASIC-1.72□□□□□ -2.68
PRPF39Q86UA1 RNU6-687P-201ENST00000516443 89 ntBASIC-1.72□□□□□ -2.68
PRPF39Q86UA1 AC005520.4-201ENST00000604337 90 ntBASIC-1.72□□□□□ -2.68
PRPF39Q86UA1 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.73□□□□□ -2.69
PRPF39Q86UA1 RNU6-787P-201ENST00000384032 107 ntBASIC-1.73□□□□□ -2.69
PRPF39Q86UA1 MIR23C-201ENST00000579846 100 ntBASIC-1.73□□□□□ -2.69
PRPF39Q86UA1 AC013734.1-201ENST00000619329 111 ntBASIC-1.73□□□□□ -2.69
PRPF39Q86UA1 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.73□□□□□ -2.69
PRPF39Q86UA1 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.74□□□□□ -2.69
PRPF39Q86UA1 RNU6-695P-201ENST00000391157 104 ntBASIC-1.74□□□□□ -2.69
PRPF39Q86UA1 MIR4723-201ENST00000585070 81 ntBASIC-1.74□□□□□ -2.69
PRPF39Q86UA1 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.75□□□□□ -2.69
PRPF39Q86UA1 MIR125B1-201ENST00000385236 88 ntBASIC-1.75□□□□□ -2.69
PRPF39Q86UA1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.75□□□□□ -2.69
PRPF39Q86UA1 AL603908.1-201ENST00000406098 201 ntBASIC-1.76□□□□□ -2.69
PRPF39Q86UA1 RNY3P8-201ENST00000411366 126 ntBASIC-1.76□□□□□ -2.69
PRPF39Q86UA1 MIR548AI-201ENST00000579940 88 ntBASIC-1.76□□□□□ -2.69
PRPF39Q86UA1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.77□□□□□ -2.69
PRPF39Q86UA1 RNU6-789P-201ENST00000517105 102 ntBASIC-1.77□□□□□ -2.69
PRPF39Q86UA1 MIR4666B-201ENST00000578142 81 ntBASIC-1.77□□□□□ -2.69
PRPF39Q86UA1 RNU6-242P-201ENST00000384359 107 ntBASIC-1.78□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 185.7 ms