Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RNU6-380P-201ENST00000410207 107 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 RNU6-627P-201ENST00000364032 102 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 RNY3P15-201ENST00000516297 97 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.54□□□□□ -2.82
VPS13DQ5THJ4 MIR548X-201ENST00000580069 75 ntBASIC-2.55□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.661-201ENST00000516003 99 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RN7SKP298-201ENST00000515950 94 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-232P-201ENST00000517144 64 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 RNU6-659P-201ENST00000516454 104 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 SNORD58B-201ENST00000607313 66 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 AC139792.2-201ENST00000624218 587 ntBASIC-2.56□□□□□ -2.82
VPS13DQ5THJ4 SNORD113-6-201ENST00000363345 75 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 MIR4801-201ENST00000582704 82 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 SNORD116-24-201ENST00000384549 92 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AL160413.1-201ENST00000622780 310 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AP001340.1-201ENST00000624405 217 ntBASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-2.57□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.58□□□□□ -2.82
VPS13DQ5THJ4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-2.58□□□□□ -2.82
VPS13DQ5THJ4 SCARNA15.1-201ENST00000516384 125 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU7-30P-201ENST00000516835 62 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-121P-201ENST00000410525 99 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 MIR5690-201ENST00000583739 73 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 AC113139.1-201ENST00000605049 239 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-915P-201ENST00000364943 103 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-483P-201ENST00000384088 108 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 RNU6-895P-201ENST00000384125 103 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 DEFB108C-201ENST00000400154 252 ntBASIC-2.59□□□□□ -2.82
VPS13DQ5THJ4 SNORD58C-201ENST00000365223 64 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-11-201ENST00000408051 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-9-201ENST00000408365 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-10-201ENST00000408734 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 MIR1302-2-201ENST00000607096 138 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 U7.3-201ENST00000616123 62 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 SNORD127-201ENST00000458892 86 ntBASIC-2.6□□□□□ -2.83
VPS13DQ5THJ4 RNU6-379P-201ENST00000363813 104 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 MIR4282-201ENST00000583613 67 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNU7-125P-201ENST00000458760 62 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNY3P16-201ENST00000516338 101 ntBASIC-2.61□□□□□ -2.83
VPS13DQ5THJ4 RNU6-275P-201ENST00000364910 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MIR548H4-201ENST00000408689 111 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 RNU6-122P-201ENST00000516818 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 RNU6-988P-201ENST00000519081 107 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MTND4LP32-201ENST00000636111 270 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 U7.2-201ENST00000607576 63 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 MIR664A-201ENST00000626086 82 ntBASIC-2.62□□□□□ -2.83
VPS13DQ5THJ4 AL157777.2-201ENST00000258070 137 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 RNU6-633P-201ENST00000362612 103 ntBASIC-2.63□□□□□ -2.83
VPS13DQ5THJ4 RNU6-574P-201ENST00000384265 107 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 MIR8062-201ENST00000621515 85 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 RNU6-411P-201ENST00000384451 107 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 AC090425.1-201ENST00000610007 140 ntBASIC-2.64□□□□□ -2.83
VPS13DQ5THJ4 RNU6-823P-201ENST00000391042 103 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 AC072026.1-201ENST00000605023 201 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 RNU6-1204P-201ENST00000363948 107 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 SNORD116-29-201ENST00000384516 83 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.65□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.66□□□□□ -2.83
VPS13DQ5THJ4 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.66□□□□□ -2.83
VPS13DQ5THJ4 AL158147.1-201ENST00000443970 75 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 SNORD116-22-201ENST00000384430 92 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 RNU6-808P-201ENST00000391233 108 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 AC006160.2-201ENST00000637708 154 ntBASIC-2.66□□□□□ -2.84
VPS13DQ5THJ4 RNU4-33P-201ENST00000364316 85 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 RNU6-780P-201ENST00000391030 104 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 RNU6-1312P-201ENST00000362425 108 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 MIR1252-201ENST00000408861 65 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 AC109635.3-201ENST00000529536 185 ntBASIC-2.67□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 RNU6-259P-201ENST00000383999 107 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.720-201ENST00000517166 92 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MTND5P22-201ENST00000458380 195 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR3938-201ENST00000582157 103 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR4484-201ENST00000582855 83 ntBASIC-2.68□□□□□ -2.84
VPS13DQ5THJ4 MIR3611-201ENST00000584484 83 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU6-315P-201ENST00000362666 107 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 SNORA19-201ENST00000384737 128 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU6-314P-201ENST00000516574 104 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.69□□□□□ -2.84
VPS13DQ5THJ4 RNU7-152P-201ENST00000458982 64 ntBASIC-2.7□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.7□□□□□ -2.84
VPS13DQ5THJ4 MIR494-201ENST00000349529 81 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 Y_RNA.194-201ENST00000363985 102 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 SNORD113-1-201ENST00000365321 69 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.71□□□□□ -2.84
VPS13DQ5THJ4 AC009094.1-201ENST00000564443 426 ntBASIC-2.71□□□□□ -2.84
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms