Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 MIR6514-201ENST00000622549 70 ntBASIC1.05□□□□□ -2.24
VARS2Q5ST30 SNORA26.4-201ENST00000391188 123 ntBASIC1.04□□□□□ -2.24
VARS2Q5ST30 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.04□□□□□ -2.24
VARS2Q5ST30 Y_RNA.129-201ENST00000363392 110 ntBASIC1.03□□□□□ -2.24
VARS2Q5ST30 Y_RNA.320-201ENST00000365144 102 ntBASIC1.03□□□□□ -2.24
VARS2Q5ST30 RNU6-110P-201ENST00000384508 104 ntBASIC1.03□□□□□ -2.24
VARS2Q5ST30 SNORD44.1-201ENST00000363202 61 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 MIR532-201ENST00000385025 91 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 RNU6-68P-201ENST00000516576 104 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 CR383656.4-201ENST00000546909 122 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VARS2Q5ST30 MIR3973-201ENST00000579824 107 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.02□□□□□ -2.25
VARS2Q5ST30 RNU6-127P-201ENST00000390897 107 ntBASIC1.01□□□□□ -2.25
VARS2Q5ST30 MIR924-201ENST00000638017 53 ntBASIC1.01□□□□□ -2.25
VARS2Q5ST30 RNU6-901P-201ENST00000384593 106 ntBASIC1□□□□□ -2.25
VARS2Q5ST30 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
VARS2Q5ST30 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1□□□□□ -2.25
VARS2Q5ST30 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
VARS2Q5ST30 RNU6-836P-201ENST00000362920 107 ntBASIC0.99□□□□□ -2.25
VARS2Q5ST30 MIR581-201ENST00000384895 96 ntBASIC0.99□□□□□ -2.25
VARS2Q5ST30 MIR148A-201ENST00000362215 68 ntBASIC0.98□□□□□ -2.25
VARS2Q5ST30 SNORD115-33-201ENST00000363723 82 ntBASIC0.98□□□□□ -2.25
VARS2Q5ST30 SNORD114-23-201ENST00000363536 72 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 RNA5SP330-201ENST00000517096 96 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 MIR4714-201ENST00000580728 77 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 AC013734.1-201ENST00000619329 111 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 MIR6513-201ENST00000621188 64 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 AC010487.4-201ENST00000637027 61 ntBASIC0.97□□□□□ -2.25
VARS2Q5ST30 MIR4698-201ENST00000577795 80 ntBASIC0.96□□□□□ -2.26
VARS2Q5ST30 Y_RNA.223-201ENST00000364290 113 ntBASIC0.95□□□□□ -2.26
VARS2Q5ST30 RPL35AP4-201ENST00000412007 102 ntBASIC0.95□□□□□ -2.26
VARS2Q5ST30 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
VARS2Q5ST30 RNU6-180P-201ENST00000516697 61 ntBASIC0.94□□□□□ -2.26
VARS2Q5ST30 RNA5SP257-201ENST00000363023 116 ntBASIC0.93□□□□□ -2.26
VARS2Q5ST30 MIR936-201ENST00000401264 98 ntBASIC0.93□□□□□ -2.26
VARS2Q5ST30 RNA5SP121-201ENST00000516537 101 ntBASIC0.93□□□□□ -2.26
VARS2Q5ST30 RNA5SP224-201ENST00000365069 126 ntBASIC0.92□□□□□ -2.26
VARS2Q5ST30 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
VARS2Q5ST30 Y_RNA.260-201ENST00000364628 101 ntBASIC0.91□□□□□ -2.26
VARS2Q5ST30 MIR4280-201ENST00000582178 76 ntBASIC0.91□□□□□ -2.26
VARS2Q5ST30 MIR548H2-201ENST00000408874 88 ntBASIC0.9□□□□□ -2.27
VARS2Q5ST30 RNA5SP163-201ENST00000410304 99 ntBASIC0.9□□□□□ -2.27
VARS2Q5ST30 SNORD18.2-201ENST00000459604 70 ntBASIC0.9□□□□□ -2.27
VARS2Q5ST30 MIR8087-201ENST00000612745 78 ntBASIC0.9□□□□□ -2.27
VARS2Q5ST30 MIR103A1-201ENST00000362165 78 ntBASIC0.88□□□□□ -2.27
VARS2Q5ST30 AC244250.2-201ENST00000418731 148 ntBASIC0.88□□□□□ -2.27
VARS2Q5ST30 MIR23C-201ENST00000579846 100 ntBASIC0.88□□□□□ -2.27
VARS2Q5ST30 RNA5SP62-201ENST00000363457 110 ntBASIC0.87□□□□□ -2.27
VARS2Q5ST30 Y_RNA.406-201ENST00000383984 100 ntBASIC0.87□□□□□ -2.27
VARS2Q5ST30 MIR379-201ENST00000362218 67 ntBASIC0.86□□□□□ -2.27
VARS2Q5ST30 SNORD74.6-201ENST00000364796 70 ntBASIC0.86□□□□□ -2.27
VARS2Q5ST30 MIR892B-201ENST00000401279 77 ntBASIC0.86□□□□□ -2.27
VARS2Q5ST30 PSMC1P5-201ENST00000512850 177 ntBASIC0.86□□□□□ -2.27
VARS2Q5ST30 RNA5SP476-201ENST00000516613 103 ntBASIC0.86□□□□□ -2.27
VARS2Q5ST30 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
VARS2Q5ST30 RNU6-815P-201ENST00000384080 113 ntBASIC0.85□□□□□ -2.27
VARS2Q5ST30 Y_RNA.603-201ENST00000410571 108 ntBASIC0.85□□□□□ -2.27
VARS2Q5ST30 AL445193.1-201ENST00000441183 141 ntBASIC0.85□□□□□ -2.27
VARS2Q5ST30 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.27
VARS2Q5ST30 MIR330-201ENST00000362196 94 ntBASIC0.84□□□□□ -2.27
VARS2Q5ST30 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.84□□□□□ -2.27
VARS2Q5ST30 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
VARS2Q5ST30 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
VARS2Q5ST30 SNORA68.3-201ENST00000515906 83 ntBASIC0.83□□□□□ -2.28
VARS2Q5ST30 MIR6851-201ENST00000617060 67 ntBASIC0.83□□□□□ -2.28
VARS2Q5ST30 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
VARS2Q5ST30 U6.97-201ENST00000636904 101 ntBASIC0.83□□□□□ -2.28
VARS2Q5ST30 MIR548AJ2-201ENST00000408539 92 ntBASIC0.82□□□□□ -2.28
VARS2Q5ST30 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
VARS2Q5ST30 MIR655-201ENST00000362159 97 ntBASIC0.81□□□□□ -2.28
VARS2Q5ST30 MIR1197-201ENST00000408818 88 ntBASIC0.81□□□□□ -2.28
VARS2Q5ST30 RNA5SP193-201ENST00000410353 107 ntBASIC0.81□□□□□ -2.28
VARS2Q5ST30 SNORD38.3-201ENST00000516599 73 ntBASIC0.81□□□□□ -2.28
VARS2Q5ST30 RNU6-929P-201ENST00000384429 107 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 MIR508-201ENST00000384857 115 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 HAR1A.1-201ENST00000459583 118 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 MIR4711-201ENST00000578274 70 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
VARS2Q5ST30 MIR507-201ENST00000385234 94 ntBASIC0.79□□□□□ -2.28
VARS2Q5ST30 RNA5SP347-201ENST00000362445 119 ntBASIC0.78□□□□□ -2.28
VARS2Q5ST30 RNU6-563P-201ENST00000364872 108 ntBASIC0.78□□□□□ -2.28
VARS2Q5ST30 Y_RNA.335-201ENST00000365299 96 ntBASIC0.78□□□□□ -2.28
VARS2Q5ST30 FTX_4.1-201ENST00000616291 147 ntBASIC0.78□□□□□ -2.28
VARS2Q5ST30 SNORD45C-201ENST00000383893 79 ntBASIC0.77□□□□□ -2.29
VARS2Q5ST30 RNU6-695P-201ENST00000391157 104 ntBASIC0.77□□□□□ -2.29
VARS2Q5ST30 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
VARS2Q5ST30 AC069113.3-201ENST00000521019 150 ntBASIC0.77□□□□□ -2.29
VARS2Q5ST30 AC120024.2-201ENST00000576526 175 ntBASIC0.77□□□□□ -2.29
VARS2Q5ST30 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
VARS2Q5ST30 MIRLET7D-201ENST00000362263 87 ntBASIC0.76□□□□□ -2.29
VARS2Q5ST30 SNORD18C-201ENST00000362704 69 ntBASIC0.76□□□□□ -2.29
VARS2Q5ST30 RNU6-1169P-201ENST00000363537 103 ntBASIC0.74□□□□□ -2.29
VARS2Q5ST30 SNORD114-17-201ENST00000364699 75 ntBASIC0.74□□□□□ -2.29
VARS2Q5ST30 SNORD22.1-201ENST00000516331 125 ntBASIC0.73□□□□□ -2.29
VARS2Q5ST30 MIR518B-201ENST00000385127 83 ntBASIC0.72□□□□□ -2.29
VARS2Q5ST30 AC090616.4-201ENST00000448026 115 ntBASIC0.72□□□□□ -2.29
VARS2Q5ST30 RNU7-165P-201ENST00000458864 60 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms