Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 RNU6-1233P-201ENST00000362922 102 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR124-2-201ENST00000385081 109 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 CR383656.4-201ENST00000546909 122 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR6835-201ENST00000621552 64 ntBASIC0.81□□□□□ -2.28
FOXC1Q12948 MIR548H2-201ENST00000408874 88 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 AP002795.1-201ENST00000534879 84 ntBASIC0.8□□□□□ -2.28
FOXC1Q12948 RNU6-485P-201ENST00000363475 107 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 MIR6514-201ENST00000622549 70 ntBASIC0.79□□□□□ -2.28
FOXC1Q12948 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 SNORD56B-201ENST00000384713 71 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 RNU6-180P-201ENST00000516697 61 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 AL627230.5-201ENST00000619807 58 ntBASIC0.78□□□□□ -2.28
FOXC1Q12948 MIR148A-201ENST00000362215 68 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 RNA5SP193-201ENST00000410353 107 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 RNU6-300P-201ENST00000459080 104 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 MIR4711-201ENST00000578274 70 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 AC103810.9-201ENST00000606688 112 ntBASIC0.77□□□□□ -2.29
FOXC1Q12948 MIR202-201ENST00000362219 110 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 RNU6-608P-201ENST00000383927 104 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
FOXC1Q12948 RNA5SP169-201ENST00000517268 117 ntBASIC0.76□□□□□ -2.29
FOXC1Q12948 RNA5SP347-201ENST00000362445 119 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 SNORA17.4-201ENST00000391287 132 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RNY3P8-201ENST00000411366 126 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
FOXC1Q12948 RNU6-815P-201ENST00000384080 113 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 RNA5SP285-201ENST00000516619 119 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
FOXC1Q12948 RNY1P9-201ENST00000532431 109 ntBASIC0.73□□□□□ -2.29
FOXC1Q12948 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.72□□□□□ -2.29
FOXC1Q12948 RNU6-176P-201ENST00000517196 105 ntBASIC0.72□□□□□ -2.29
FOXC1Q12948 SNORD114-2-201ENST00000363953 78 ntBASIC0.71□□□□□ -2.3
FOXC1Q12948 MIR5087-201ENST00000635826 76 ntBASIC0.71□□□□□ -2.3
FOXC1Q12948 MIR643-201ENST00000385267 97 ntBASIC0.7□□□□□ -2.3
FOXC1Q12948 MIR4653-201ENST00000585107 83 ntBASIC0.7□□□□□ -2.3
FOXC1Q12948 MIRLET7D-201ENST00000362263 87 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR4280-201ENST00000582178 76 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR2909-201ENST00000617113 69 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR5683-201ENST00000636514 76 ntBASIC0.69□□□□□ -2.3
FOXC1Q12948 MIR655-201ENST00000362159 97 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 RNA5SP163-201ENST00000410304 99 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 AC244250.2-201ENST00000418731 148 ntBASIC0.68□□□□□ -2.3
FOXC1Q12948 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
FOXC1Q12948 SNORA26.4-201ENST00000391188 123 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 SNORA62.5-201ENST00000516634 120 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 AC069113.3-201ENST00000521019 150 ntBASIC0.67□□□□□ -2.3
FOXC1Q12948 RNU6-901P-201ENST00000384593 106 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 MIR146A-201ENST00000385201 99 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 MIR892B-201ENST00000401279 77 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 RNU6-351P-201ENST00000516097 100 ntBASIC0.66□□□□□ -2.3
FOXC1Q12948 VTRNA1-3-201ENST00000365645 89 ntBASIC0.65□□□□□ -2.31
FOXC1Q12948 MIR548N-201ENST00000408742 75 ntBASIC0.63□□□□□ -2.31
FOXC1Q12948 AL353691.2-201ENST00000443795 59 ntBASIC0.63□□□□□ -2.31
FOXC1Q12948 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
FOXC1Q12948 SNORD115-33-201ENST00000363723 82 ntBASIC0.62□□□□□ -2.31
FOXC1Q12948 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
FOXC1Q12948 MIR4636-201ENST00000582271 80 ntBASIC0.61□□□□□ -2.31
FOXC1Q12948 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
FOXC1Q12948 SNORD60-201ENST00000383903 83 ntBASIC0.6□□□□□ -2.31
FOXC1Q12948 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 SNORD74.6-201ENST00000364796 70 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 MIR4743-201ENST00000584576 69 ntBASIC0.59□□□□□ -2.31
FOXC1Q12948 RNU7-165P-201ENST00000458864 60 ntBASIC0.58□□□□□ -2.32
FOXC1Q12948 MIR6851-201ENST00000617060 67 ntBASIC0.58□□□□□ -2.32
FOXC1Q12948 AL445193.1-201ENST00000441183 141 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 SNORD18.2-201ENST00000459604 70 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 SNORD38.3-201ENST00000516599 73 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.55□□□□□ -2.32
FOXC1Q12948 RNU6-30P-201ENST00000384561 107 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 MIR5589-201ENST00000579442 60 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 MIR6759-201ENST00000638110 65 ntBASIC0.54□□□□□ -2.32
FOXC1Q12948 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
FOXC1Q12948 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 RNU6-1327P-201ENST00000365302 105 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR593-201ENST00000384856 100 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR581-201ENST00000384895 96 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 RNU6-68P-201ENST00000516576 104 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR4315-1-201ENST00000636800 73 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 MIR4315-2-201ENST00000640925 73 ntBASIC0.53□□□□□ -2.32
FOXC1Q12948 Y_RNA.382-201ENST00000365672 114 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 AC114737.2-201ENST00000421583 173 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 snoU13.19-201ENST00000459148 104 ntBASIC0.52□□□□□ -2.33
FOXC1Q12948 MIR145-201ENST00000384967 88 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 MIR610-201ENST00000385139 96 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 RPL35AP4-201ENST00000412007 102 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 MIR4802-201ENST00000581881 80 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 AC013734.1-201ENST00000619329 111 ntBASIC0.5□□□□□ -2.33
FOXC1Q12948 Y_RNA.134-201ENST00000363435 105 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 RNU7-159P-201ENST00000459284 62 ntBASIC0.47□□□□□ -2.33
FOXC1Q12948 Y_RNA.129-201ENST00000363392 110 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 MIR518B-201ENST00000385127 83 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
FOXC1Q12948 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 403.7 ms