Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU6-979P-201ENST00000383896 107 ntBASIC-0.85□□□□□ -2.55
TNFRSF9Q07011 RNU6-44P-201ENST00000384045 107 ntBASIC-0.85□□□□□ -2.55
TNFRSF9Q07011 MIR5591-201ENST00000578248 65 ntBASIC-0.85□□□□□ -2.55
TNFRSF9Q07011 MIR5588-201ENST00000581890 63 ntBASIC-0.85□□□□□ -2.55
TNFRSF9Q07011 RNU6-226P-201ENST00000363778 107 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 RNU6-668P-201ENST00000364180 107 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 RNA5SP192-201ENST00000364404 120 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 SNORD115-31-201ENST00000365318 82 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 RNU6-10P-201ENST00000384036 107 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 SNORD116-16-201ENST00000384533 92 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 RNA5SP89-201ENST00000410300 108 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 MIR1297-201ENST00000637311 77 ntBASIC-0.86□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 MIR587-201ENST00000384845 96 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 AC018880.2-201ENST00000414265 201 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 HLA-S-202ENST00000425174 53 ntBASIC-0.87□□□□□ -2.55
TNFRSF9Q07011 RNU6-315P-201ENST00000362666 107 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 RNA5SP215-201ENST00000363440 122 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 RNY1P1-201ENST00000364372 112 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 RNU6-974P-201ENST00000384099 108 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 MIR579-201ENST00000385221 98 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 MTND4LP1-201ENST00000446263 157 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 RNU6-919P-201ENST00000516731 104 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 MIR3134-201ENST00000579433 74 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 MIR4712-201ENST00000583750 82 ntBASIC-0.88□□□□□ -2.55
TNFRSF9Q07011 MIR487B-201ENST00000385021 84 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 RNA5SP86-201ENST00000390869 98 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.678-201ENST00000516408 96 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 RNU7-151P-201ENST00000516930 53 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 MIR3165-201ENST00000579874 75 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 AC138207.3-201ENST00000585289 166 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 MIR8053-201ENST00000613344 75 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 IGLL4P-201ENST00000614590 133 ntBASIC-0.89□□□□□ -2.55
TNFRSF9Q07011 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 RNU6-787P-201ENST00000384032 107 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 RNU7-171P-201ENST00000459581 62 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 RNU6-70P-201ENST00000516438 60 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 AC120024.2-201ENST00000576526 175 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 AC005520.4-201ENST00000604337 90 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 MIR7978-201ENST00000636158 59 ntBASIC-0.9□□□□□ -2.55
TNFRSF9Q07011 MIR494-201ENST00000349529 81 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 MIR548AA1-201ENST00000384971 97 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 AC013734.1-201ENST00000619329 111 ntBASIC-0.91□□□□□ -2.56
TNFRSF9Q07011 MIR429-201ENST00000362106 83 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNY4P30-201ENST00000410216 95 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-172P-201ENST00000411000 93 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-687P-201ENST00000516443 89 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 MIR4770-201ENST00000579149 58 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 MIR1245B-201ENST00000636115 69 ntBASIC-0.92□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.93□□□□□ -2.56
TNFRSF9Q07011 RNU6-669P-201ENST00000365575 107 ntBASIC-0.93□□□□□ -2.56
TNFRSF9Q07011 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
TNFRSF9Q07011 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.93□□□□□ -2.56
TNFRSF9Q07011 MIR154-201ENST00000385243 84 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 RNU6-400P-201ENST00000391173 106 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 AL603908.1-201ENST00000406098 201 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 MIR548H1-201ENST00000408610 102 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 SNX3P1X-201ENST00000414887 175 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 SNORD63.2-201ENST00000516303 64 ntBASIC-0.94□□□□□ -2.56
TNFRSF9Q07011 RNU6-247P-201ENST00000362636 107 ntBASIC-0.95□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.95□□□□□ -2.56
TNFRSF9Q07011 RNU6-380P-201ENST00000410207 107 ntBASIC-0.95□□□□□ -2.56
TNFRSF9Q07011 MIR548AI-201ENST00000579940 88 ntBASIC-0.95□□□□□ -2.56
TNFRSF9Q07011 RNU6-153P-201ENST00000364422 104 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 MIR125B1-201ENST00000385236 88 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 RNY3P8-201ENST00000411366 126 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 MIR4666B-201ENST00000578142 81 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 MIR4320-201ENST00000636981 65 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 MIR198-201ENST00000637333 62 ntBASIC-0.96□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNU6-895P-201ENST00000384125 103 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNU6-540P-201ENST00000384622 101 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNU6-695P-201ENST00000391157 104 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNU6-523P-201ENST00000516304 54 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNA5SP461-201ENST00000516451 104 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 RNU6-789P-201ENST00000517105 102 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 U6.97-201ENST00000636904 101 ntBASIC-0.97□□□□□ -2.56
TNFRSF9Q07011 SNORD60.1-201ENST00000362451 73 ntBASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.98□□□□□ -2.57
TNFRSF9Q07011 Y_RNA.449-201ENST00000384187 102 ntBASIC-0.98□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms