Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.19□□□□□ -2.6
PEX3P56589 RNU6-668P-201ENST00000364180 107 ntBASIC-1.2□□□□□ -2.6
PEX3P56589 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.21□□□□□ -2.6
PEX3P56589 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.21□□□□□ -2.6
PEX3P56589 RNU6-820P-201ENST00000384273 107 ntBASIC-1.21□□□□□ -2.6
PEX3P56589 AC062037.1-201ENST00000605302 128 ntBASIC-1.21□□□□□ -2.6
PEX3P56589 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 SNORD116-24-201ENST00000384549 92 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 RNY1P9-201ENST00000532431 109 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 MIR6818-201ENST00000621576 65 ntBASIC-1.22□□□□□ -2.6
PEX3P56589 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.22□□□□□ -2.6
PEX3P56589 MIR527-201ENST00000385244 85 ntBASIC-1.23□□□□□ -2.61
PEX3P56589 RNU6-696P-201ENST00000390834 107 ntBASIC-1.23□□□□□ -2.61
PEX3P56589 RNA5SP26-201ENST00000362406 119 ntBASIC-1.24□□□□□ -2.61
PEX3P56589 RNA5SP192-201ENST00000364404 120 ntBASIC-1.24□□□□□ -2.61
PEX3P56589 SNORD57-201ENST00000448188 72 ntBASIC-1.24□□□□□ -2.61
PEX3P56589 RNU6-70P-201ENST00000516438 60 ntBASIC-1.24□□□□□ -2.61
PEX3P56589 MIR3134-201ENST00000579433 74 ntBASIC-1.24□□□□□ -2.61
PEX3P56589 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.25□□□□□ -2.61
PEX3P56589 MIR630-201ENST00000384957 97 ntBASIC-1.25□□□□□ -2.61
PEX3P56589 MIR507-201ENST00000385234 94 ntBASIC-1.25□□□□□ -2.61
PEX3P56589 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.25□□□□□ -2.61
PEX3P56589 MIR4306-201ENST00000583390 91 ntBASIC-1.25□□□□□ -2.61
PEX3P56589 MIR5683-201ENST00000636514 76 ntBASIC-1.25□□□□□ -2.61
PEX3P56589 MIR429-201ENST00000362106 83 ntBASIC-1.26□□□□□ -2.61
PEX3P56589 SNORD113-2-201ENST00000391082 72 ntBASIC-1.26□□□□□ -2.61
PEX3P56589 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.26□□□□□ -2.61
PEX3P56589 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.27□□□□□ -2.61
PEX3P56589 RNU6-598P-201ENST00000364017 105 ntBASIC-1.27□□□□□ -2.61
PEX3P56589 SNORD115-31-201ENST00000365318 82 ntBASIC-1.27□□□□□ -2.61
PEX3P56589 SNORD116-16-201ENST00000384533 92 ntBASIC-1.27□□□□□ -2.61
PEX3P56589 RNU6-687P-201ENST00000516443 89 ntBASIC-1.27□□□□□ -2.61
PEX3P56589 MIR154-201ENST00000385243 84 ntBASIC-1.28□□□□□ -2.61
PEX3P56589 MIR4320-201ENST00000636981 65 ntBASIC-1.28□□□□□ -2.61
PEX3P56589 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.29□□□□□ -2.62
PEX3P56589 RPL35AP4-201ENST00000412007 102 ntBASIC-1.29□□□□□ -2.62
PEX3P56589 RNA5SP173-201ENST00000364857 136 ntBASIC-1.3□□□□□ -2.62
PEX3P56589 RNA5SP170-201ENST00000517150 101 ntBASIC-1.3□□□□□ -2.62
PEX3P56589 SNORA41B-201ENST00000384785 128 ntBASIC-1.31□□□□□ -2.62
PEX3P56589 MIR548Q-201ENST00000408404 100 ntBASIC-1.31□□□□□ -2.62
PEX3P56589 MIR4490-201ENST00000582647 84 ntBASIC-1.31□□□□□ -2.62
PEX3P56589 RNA5SP461-201ENST00000516451 104 ntBASIC-1.33□□□□□ -2.62
PEX3P56589 MIR3165-201ENST00000579874 75 ntBASIC-1.33□□□□□ -2.62
PEX3P56589 U2.18-201ENST00000622185 84 ntBASIC-1.33□□□□□ -2.62
PEX3P56589 RNU6-895P-201ENST00000384125 103 ntBASIC-1.34□□□□□ -2.62
PEX3P56589 MIR8485-201ENST00000401372 91 ntBASIC-1.34□□□□□ -2.62
PEX3P56589 MIR409-201ENST00000362237 79 ntBASIC-1.35□□□□□ -2.63
PEX3P56589 SNORD73B-201ENST00000364394 72 ntBASIC-1.35□□□□□ -2.63
PEX3P56589 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.35□□□□□ -2.63
PEX3P56589 RNU6-411P-201ENST00000384451 107 ntBASIC-1.35□□□□□ -2.63
PEX3P56589 RNU6-576P-201ENST00000390854 102 ntBASIC-1.35□□□□□ -2.63
PEX3P56589 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.36□□□□□ -2.63
PEX3P56589 AC090616.4-201ENST00000448026 115 ntBASIC-1.36□□□□□ -2.63
PEX3P56589 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.36□□□□□ -2.63
PEX3P56589 SNORD1B-201ENST00000363091 84 ntBASIC-1.37□□□□□ -2.63
PEX3P56589 MIR520D-201ENST00000385002 87 ntBASIC-1.37□□□□□ -2.63
PEX3P56589 MIR3202-2-201ENST00000635980 79 ntBASIC-1.37□□□□□ -2.63
PEX3P56589 RNU6-630P-201ENST00000391258 106 ntBASIC-1.38□□□□□ -2.63
PEX3P56589 U7.4-201ENST00000614961 63 ntBASIC-1.38□□□□□ -2.63
PEX3P56589 AC091912.2-201ENST00000624798 167 ntBASIC-1.38□□□□□ -2.63
PEX3P56589 RNU6-164P-201ENST00000364604 103 ntBASIC-1.39□□□□□ -2.63
PEX3P56589 MIR6874-201ENST00000635894 71 ntBASIC-1.39□□□□□ -2.63
PEX3P56589 RNU6-608P-201ENST00000383927 104 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 MIR889-201ENST00000401280 79 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 RNY4P29-201ENST00000410801 97 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 RNU6-634P-201ENST00000459134 106 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 RNU6-523P-201ENST00000516304 54 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 RNU6-542P-201ENST00000516405 103 ntBASIC-1.4□□□□□ -2.63
PEX3P56589 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
PEX3P56589 MIR548AA1-201ENST00000384971 97 ntBASIC-1.42□□□□□ -2.64
PEX3P56589 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.42□□□□□ -2.64
PEX3P56589 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.42□□□□□ -2.64
PEX3P56589 RNU6-228P-201ENST00000362700 106 ntBASIC-1.43□□□□□ -2.64
PEX3P56589 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.43□□□□□ -2.64
PEX3P56589 RNU6-540P-201ENST00000384622 101 ntBASIC-1.43□□□□□ -2.64
PEX3P56589 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.43□□□□□ -2.64
PEX3P56589 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.44□□□□□ -2.64
PEX3P56589 RNU6-279P-201ENST00000391297 101 ntBASIC-1.44□□□□□ -2.64
PEX3P56589 RNA5SP266-201ENST00000410273 108 ntBASIC-1.44□□□□□ -2.64
PEX3P56589 MIR3170-201ENST00000582699 77 ntBASIC-1.44□□□□□ -2.64
PEX3P56589 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.45□□□□□ -2.64
PEX3P56589 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.45□□□□□ -2.64
PEX3P56589 RNU6-573P-201ENST00000383938 106 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
PEX3P56589 SNORA26.2-201ENST00000390922 122 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 RNU6-857P-201ENST00000515893 110 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 RNA5SP180-201ENST00000516181 101 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 RNU6-92P-201ENST00000605893 104 ntBASIC-1.46□□□□□ -2.64
PEX3P56589 AC138207.3-201ENST00000585289 166 ntBASIC-1.47□□□□□ -2.64
PEX3P56589 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.48□□□□□ -2.65
PEX3P56589 RNU6-663P-201ENST00000391105 106 ntBASIC-1.49□□□□□ -2.65
PEX3P56589 MIR1255A-201ENST00000408338 113 ntBASIC-1.49□□□□□ -2.65
PEX3P56589 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.5□□□□□ -2.65
PEX3P56589 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.5□□□□□ -2.65
PEX3P56589 SNORD60.1-201ENST00000362451 73 ntBASIC-1.51□□□□□ -2.65
PEX3P56589 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.51□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 223.8 ms