Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RNU6-823P-201ENST00000391042 103 ntBASIC-2.57□□□□□ -2.82
HTTP42858 SNORD127-201ENST00000458892 86 ntBASIC-2.57□□□□□ -2.82
HTTP42858 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.57□□□□□ -2.82
HTTP42858 Y_RNA.19-201ENST00000362462 99 ntBASIC-2.59□□□□□ -2.82
HTTP42858 MIR545-201ENST00000385085 106 ntBASIC-2.59□□□□□ -2.82
HTTP42858 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-2.59□□□□□ -2.82
HTTP42858 RNY3P15-201ENST00000516297 97 ntBASIC-2.59□□□□□ -2.82
HTTP42858 MIR4668-201ENST00000582284 70 ntBASIC-2.59□□□□□ -2.82
HTTP42858 RNU6-836P-201ENST00000362920 107 ntBASIC-2.6□□□□□ -2.83
HTTP42858 RNU6-876P-201ENST00000391295 104 ntBASIC-2.61□□□□□ -2.83
HTTP42858 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-2.61□□□□□ -2.83
HTTP42858 MIR5690-201ENST00000583739 73 ntBASIC-2.61□□□□□ -2.83
HTTP42858 MTATP8P2-201ENST00000435212 202 ntBASIC-2.61□□□□□ -2.83
HTTP42858 RNU6-1015P-201ENST00000517121 99 ntBASIC-2.61□□□□□ -2.83
HTTP42858 MIR8062-201ENST00000621515 85 ntBASIC-2.61□□□□□ -2.83
HTTP42858 SNORD116-29-201ENST00000384516 83 ntBASIC-2.62□□□□□ -2.83
HTTP42858 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.63□□□□□ -2.83
HTTP42858 RNU6-904P-201ENST00000516206 101 ntBASIC-2.63□□□□□ -2.83
HTTP42858 Y_RNA.187-201ENST00000363918 113 ntBASIC-2.63□□□□□ -2.83
HTTP42858 Y_RNA.553-201ENST00000384670 102 ntBASIC-2.63□□□□□ -2.83
HTTP42858 RNU6-1043P-201ENST00000410355 99 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-277P-201ENST00000516272 106 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-659P-201ENST00000516454 104 ntBASIC-2.64□□□□□ -2.83
HTTP42858 U7.2-201ENST00000607576 63 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-1042P-201ENST00000384204 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-574P-201ENST00000384265 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU7-152P-201ENST00000458982 64 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-314P-201ENST00000516574 104 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-633P-201ENST00000362612 103 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-275P-201ENST00000364910 107 ntBASIC-2.64□□□□□ -2.83
HTTP42858 Y_RNA.620-201ENST00000411009 88 ntBASIC-2.64□□□□□ -2.83
HTTP42858 Y_RNA.693-201ENST00000516641 110 ntBASIC-2.64□□□□□ -2.83
HTTP42858 AP001340.1-201ENST00000624405 217 ntBASIC-2.64□□□□□ -2.83
HTTP42858 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.65□□□□□ -2.83
HTTP42858 RNU6-411P-201ENST00000384451 107 ntBASIC-2.65□□□□□ -2.83
HTTP42858 Y_RNA.89-201ENST00000363031 102 ntBASIC-2.66□□□□□ -2.83
HTTP42858 MIR4282-201ENST00000583613 67 ntBASIC-2.66□□□□□ -2.84
HTTP42858 DEFB108C-201ENST00000400154 252 ntBASIC-2.66□□□□□ -2.84
HTTP42858 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.66□□□□□ -2.84
HTTP42858 Y_RNA.406-201ENST00000383984 100 ntBASIC-2.67□□□□□ -2.84
HTTP42858 SNORD116-24-201ENST00000384549 92 ntBASIC-2.67□□□□□ -2.84
HTTP42858 MTND4P17-201ENST00000470444 350 ntBASIC-2.67□□□□□ -2.84
HTTP42858 MIR548X-201ENST00000580069 75 ntBASIC-2.67□□□□□ -2.84
HTTP42858 Y_RNA.544-201ENST00000384650 113 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-918P-201ENST00000391219 106 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-1008P-201ENST00000384160 104 ntBASIC-2.68□□□□□ -2.84
HTTP42858 MIR1252-201ENST00000408861 65 ntBASIC-2.68□□□□□ -2.84
HTTP42858 RNU6-988P-201ENST00000519081 107 ntBASIC-2.68□□□□□ -2.84
HTTP42858 AL117187.1-201ENST00000555482 181 ntBASIC-2.68□□□□□ -2.84
HTTP42858 MIR3611-201ENST00000584484 83 ntBASIC-2.68□□□□□ -2.84
HTTP42858 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.69□□□□□ -2.84
HTTP42858 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.69□□□□□ -2.84
HTTP42858 RNU4-14P-201ENST00000410858 122 ntBASIC-2.69□□□□□ -2.84
HTTP42858 MIR1302-11-201ENST00000408051 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-9-201ENST00000408365 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-10-201ENST00000408734 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 Y_RNA.632-201ENST00000459189 102 ntBASIC-2.7□□□□□ -2.84
HTTP42858 MIR1302-2-201ENST00000607096 138 ntBASIC-2.7□□□□□ -2.84
HTTP42858 U2.14-201ENST00000615943 113 ntBASIC-2.7□□□□□ -2.84
HTTP42858 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
HTTP42858 AL158147.1-201ENST00000443970 75 ntBASIC-2.71□□□□□ -2.84
HTTP42858 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.71□□□□□ -2.84
HTTP42858 RNU6-979P-201ENST00000383896 107 ntBASIC-2.71□□□□□ -2.84
HTTP42858 AC006160.2-201ENST00000637708 154 ntBASIC-2.71□□□□□ -2.84
HTTP42858 AC006362.1-201ENST00000567392 174 ntBASIC-2.72□□□□□ -2.85
HTTP42858 MIR2052-201ENST00000636055 55 ntBASIC-2.72□□□□□ -2.85
HTTP42858 RNU6-797P-201ENST00000363101 109 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-379P-201ENST00000363813 104 ntBASIC-2.73□□□□□ -2.85
HTTP42858 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.73□□□□□ -2.85
HTTP42858 SNORD58C-201ENST00000365223 64 ntBASIC-2.73□□□□□ -2.85
HTTP42858 AC009094.1-201ENST00000564443 426 ntBASIC-2.73□□□□□ -2.85
HTTP42858 MIR4643-201ENST00000577473 78 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-380P-201ENST00000410207 107 ntBASIC-2.73□□□□□ -2.85
HTTP42858 RNU6-1255P-201ENST00000363434 112 ntBASIC-2.74□□□□□ -2.85
HTTP42858 SNORA40.4-201ENST00000390971 128 ntBASIC-2.74□□□□□ -2.85
HTTP42858 U7.3-201ENST00000616123 62 ntBASIC-2.74□□□□□ -2.85
HTTP42858 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.74□□□□□ -2.85
HTTP42858 SNORD116-22-201ENST00000384430 92 ntBASIC-2.74□□□□□ -2.85
HTTP42858 RNU4-71P-201ENST00000516258 113 ntBASIC-2.74□□□□□ -2.85
HTTP42858 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.74□□□□□ -2.85
HTTP42858 RNU6-915P-201ENST00000364943 103 ntBASIC-2.75□□□□□ -2.85
HTTP42858 MTND4LP32-201ENST00000636111 270 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.554-201ENST00000384672 102 ntBASIC-2.75□□□□□ -2.85
HTTP42858 AC139792.2-201ENST00000624218 587 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.219-201ENST00000364232 113 ntBASIC-2.75□□□□□ -2.85
HTTP42858 RNU6-895P-201ENST00000384125 103 ntBASIC-2.75□□□□□ -2.85
HTTP42858 MIR548AL-201ENST00000578416 97 ntBASIC-2.75□□□□□ -2.85
HTTP42858 Y_RNA.722-201ENST00000517279 114 ntBASIC-2.76□□□□□ -2.85
HTTP42858 SNORD58.1-201ENST00000391313 66 ntBASIC-2.76□□□□□ -2.85
HTTP42858 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.76□□□□□ -2.85
HTTP42858 AC109635.3-201ENST00000529536 185 ntBASIC-2.76□□□□□ -2.85
HTTP42858 MIR4484-201ENST00000582855 83 ntBASIC-2.76□□□□□ -2.85
HTTP42858 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.77□□□□□ -2.85
HTTP42858 Y_RNA.345-201ENST00000365384 92 ntBASIC-2.77□□□□□ -2.85
HTTP42858 RNU6-772P-201ENST00000516042 105 ntBASIC-2.77□□□□□ -2.85
HTTP42858 SNORD11.1-201ENST00000459482 85 ntBASIC-2.77□□□□□ -2.85
HTTP42858 SNORA19-201ENST00000384737 128 ntBASIC-2.78□□□□□ -2.85
HTTP42858 RNU6-1326P-201ENST00000391262 107 ntBASIC-2.78□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 1188.7 ms