Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL606753.1-201ENST00000427435 87 ntBASIC-1.76□□□□□ -2.69
RFC4P35249 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.76□□□□□ -2.69
RFC4P35249 MIR664A-201ENST00000626086 82 ntBASIC-1.76□□□□□ -2.69
RFC4P35249 SNORD113.1-201ENST00000363280 73 ntBASIC-1.77□□□□□ -2.69
RFC4P35249 RNU6-668P-201ENST00000364180 107 ntBASIC-1.77□□□□□ -2.69
RFC4P35249 MIR1285-2-201ENST00000408311 88 ntBASIC-1.77□□□□□ -2.69
RFC4P35249 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.78□□□□□ -2.69
RFC4P35249 SNORD114-3-201ENST00000364969 75 ntBASIC-1.78□□□□□ -2.69
RFC4P35249 RNA5SP180-201ENST00000516181 101 ntBASIC-1.78□□□□□ -2.69
RFC4P35249 MIR365A-201ENST00000362260 87 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 SNORD113-1-201ENST00000365321 69 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 SNORD20-201ENST00000384550 80 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 MIR8053-201ENST00000613344 75 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 U2.18-201ENST00000622185 84 ntBASIC-1.79□□□□□ -2.7
RFC4P35249 SNORD45A-201ENST00000384512 84 ntBASIC-1.8□□□□□ -2.7
RFC4P35249 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.8□□□□□ -2.7
RFC4P35249 IGLL4P-201ENST00000614590 133 ntBASIC-1.8□□□□□ -2.7
RFC4P35249 RNA5SP215-201ENST00000363440 122 ntBASIC-1.81□□□□□ -2.7
RFC4P35249 SNORD113-2-201ENST00000391082 72 ntBASIC-1.81□□□□□ -2.7
RFC4P35249 RNU6-168P-201ENST00000516189 101 ntBASIC-1.81□□□□□ -2.7
RFC4P35249 RNY1P1-201ENST00000364372 112 ntBASIC-1.82□□□□□ -2.7
RFC4P35249 AC138207.3-201ENST00000585289 166 ntBASIC-1.82□□□□□ -2.7
RFC4P35249 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 RNU6-215P-201ENST00000365169 102 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 RNU6-608P-201ENST00000383927 104 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 MIR520D-201ENST00000385002 87 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 AC018880.2-201ENST00000414265 201 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 RNU6-919P-201ENST00000516731 104 ntBASIC-1.83□□□□□ -2.7
RFC4P35249 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.84□□□□□ -2.7
RFC4P35249 RNU6-49P-201ENST00000384256 107 ntBASIC-1.84□□□□□ -2.7
RFC4P35249 MIR4520-1-201ENST00000582609 70 ntBASIC-1.84□□□□□ -2.7
RFC4P35249 RNU6-315P-201ENST00000362666 107 ntBASIC-1.85□□□□□ -2.71
RFC4P35249 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.85□□□□□ -2.71
RFC4P35249 HLA-S-202ENST00000425174 53 ntBASIC-1.85□□□□□ -2.71
RFC4P35249 MIR5588-201ENST00000581890 63 ntBASIC-1.85□□□□□ -2.71
RFC4P35249 MIR4441-201ENST00000582623 100 ntBASIC-1.85□□□□□ -2.71
RFC4P35249 MIR6502-201ENST00000617296 76 ntBASIC-1.86□□□□□ -2.71
RFC4P35249 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.87□□□□□ -2.71
RFC4P35249 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.87□□□□□ -2.71
RFC4P35249 SNORD116-16-201ENST00000384533 92 ntBASIC-1.88□□□□□ -2.71
RFC4P35249 RNU6-979P-201ENST00000383896 107 ntBASIC-1.89□□□□□ -2.71
RFC4P35249 RNU6-44P-201ENST00000384045 107 ntBASIC-1.89□□□□□ -2.71
RFC4P35249 SNORA41B-201ENST00000384785 128 ntBASIC-1.89□□□□□ -2.71
RFC4P35249 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.89□□□□□ -2.71
RFC4P35249 MIR5591-201ENST00000578248 65 ntBASIC-1.89□□□□□ -2.71
RFC4P35249 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.9□□□□□ -2.71
RFC4P35249 MIR3170-201ENST00000582699 77 ntBASIC-1.9□□□□□ -2.71
RFC4P35249 RNU6-226P-201ENST00000363778 107 ntBASIC-1.91□□□□□ -2.72
RFC4P35249 RNA5SP173-201ENST00000364857 136 ntBASIC-1.91□□□□□ -2.72
RFC4P35249 MIR548AA1-201ENST00000384971 97 ntBASIC-1.91□□□□□ -2.72
RFC4P35249 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.91□□□□□ -2.72
RFC4P35249 RNA5SP89-201ENST00000410300 108 ntBASIC-1.91□□□□□ -2.72
RFC4P35249 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.92□□□□□ -2.72
RFC4P35249 RNU6-70P-201ENST00000516438 60 ntBASIC-1.93□□□□□ -2.72
RFC4P35249 MIR1246-201ENST00000636535 73 ntBASIC-1.93□□□□□ -2.72
RFC4P35249 RNU6-79P-201ENST00000362511 107 ntBASIC-1.94□□□□□ -2.72
RFC4P35249 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.94□□□□□ -2.72
RFC4P35249 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.94□□□□□ -2.72
RFC4P35249 SNORD1B-201ENST00000363091 84 ntBASIC-1.95□□□□□ -2.72
RFC4P35249 MIR154-201ENST00000385243 84 ntBASIC-1.95□□□□□ -2.72
RFC4P35249 MIR4770-201ENST00000579149 58 ntBASIC-1.95□□□□□ -2.72
RFC4P35249 RNU6-247P-201ENST00000362636 107 ntBASIC-1.96□□□□□ -2.72
RFC4P35249 RNU6-895P-201ENST00000384125 103 ntBASIC-1.96□□□□□ -2.72
RFC4P35249 RNY4P30-201ENST00000410216 95 ntBASIC-1.96□□□□□ -2.72
RFC4P35249 RNU7-171P-201ENST00000459581 62 ntBASIC-1.96□□□□□ -2.72
RFC4P35249 MIR4712-201ENST00000583750 82 ntBASIC-1.96□□□□□ -2.72
RFC4P35249 RNU6-400P-201ENST00000391173 106 ntBASIC-1.97□□□□□ -2.72
RFC4P35249 MIR1245B-201ENST00000636115 69 ntBASIC-1.97□□□□□ -2.72
RFC4P35249 SNORD116-24-201ENST00000384549 92 ntBASIC-1.98□□□□□ -2.73
RFC4P35249 MIR23C-201ENST00000579846 100 ntBASIC-1.98□□□□□ -2.73
RFC4P35249 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.99□□□□□ -2.73
RFC4P35249 AL603908.1-201ENST00000406098 201 ntBASIC-1.99□□□□□ -2.73
RFC4P35249 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.99□□□□□ -2.73
RFC4P35249 MIR494-201ENST00000349529 81 ntBASIC-2□□□□□ -2.73
RFC4P35249 MIR579-201ENST00000385221 98 ntBASIC-2□□□□□ -2.73
RFC4P35249 RNU6-258P-201ENST00000390884 101 ntBASIC-2□□□□□ -2.73
RFC4P35249 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2□□□□□ -2.73
RFC4P35249 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 SNORD115-31-201ENST00000365318 82 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 RNU6-995P-201ENST00000391244 107 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 RNU7-151P-201ENST00000516930 53 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 AC120024.2-201ENST00000576526 175 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 Y_RNA.788-201ENST00000622394 112 ntBASIC-2.01□□□□□ -2.73
RFC4P35249 RNU6-789P-201ENST00000517105 102 ntBASIC-2.02□□□□□ -2.73
RFC4P35249 Y_RNA.94-201ENST00000363068 106 ntBASIC-2.03□□□□□ -2.73
RFC4P35249 RNU6-172P-201ENST00000411000 93 ntBASIC-2.03□□□□□ -2.73
RFC4P35249 MIR3134-201ENST00000579433 74 ntBASIC-2.03□□□□□ -2.73
RFC4P35249 RNU6-563P-201ENST00000364872 108 ntBASIC-2.04□□□□□ -2.74
RFC4P35249 RNU6-242P-201ENST00000384359 107 ntBASIC-2.05□□□□□ -2.74
RFC4P35249 Y_RNA.291-201ENST00000364886 113 ntBASIC-2.07□□□□□ -2.74
RFC4P35249 RNU6-1276P-201ENST00000365372 104 ntBASIC-2.07□□□□□ -2.74
RFC4P35249 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.07□□□□□ -2.74
RFC4P35249 MIR548H1-201ENST00000408610 102 ntBASIC-2.07□□□□□ -2.74
RFC4P35249 MIR548AI-201ENST00000579940 88 ntBASIC-2.07□□□□□ -2.74
RFC4P35249 SNORD63.2-201ENST00000516303 64 ntBASIC-2.08□□□□□ -2.74
RFC4P35249 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.08□□□□□ -2.74
RFC4P35249 RNU6-669P-201ENST00000365575 107 ntBASIC-2.09□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 250.5 ms