Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-1008P-201ENST00000384160 104 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 RNU6-59P-201ENST00000384787 107 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 MIR593-201ENST00000384856 100 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 MIR193B-201ENST00000384907 83 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 MIR610-201ENST00000385139 96 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 RNU7-165P-201ENST00000458864 60 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 RNA5SP480-201ENST00000516840 109 ntBASIC0.33□□□□□ -2.36
TRIM13O60858 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
TRIM13O60858 SNORD114-23-201ENST00000363536 72 ntBASIC0.32□□□□□ -2.36
TRIM13O60858 Y_RNA.699-201ENST00000516803 93 ntBASIC0.32□□□□□ -2.36
TRIM13O60858 MIR4280-201ENST00000582178 76 ntBASIC0.32□□□□□ -2.36
TRIM13O60858 MIR936-201ENST00000401264 98 ntBASIC0.31□□□□□ -2.36
TRIM13O60858 RNA5SP134-201ENST00000516492 96 ntBASIC0.31□□□□□ -2.36
TRIM13O60858 SNORA62.5-201ENST00000516634 120 ntBASIC0.31□□□□□ -2.36
TRIM13O60858 RN7SL793P-201ENST00000583259 296 ntBASIC0.31□□□□□ -2.36
TRIM13O60858 MIR489-201ENST00000384923 84 ntBASIC0.3□□□□□ -2.36
TRIM13O60858 MIR145-201ENST00000384967 88 ntBASIC0.3□□□□□ -2.36
TRIM13O60858 RNU7-159P-201ENST00000459284 62 ntBASIC0.3□□□□□ -2.36
TRIM13O60858 MIR4711-201ENST00000578274 70 ntBASIC0.3□□□□□ -2.36
TRIM13O60858 U6.103-201ENST00000637085 61 ntBASIC0.3□□□□□ -2.36
TRIM13O60858 RNA5SP193-201ENST00000410353 107 ntBASIC0.29□□□□□ -2.36
TRIM13O60858 AL445193.1-201ENST00000441183 141 ntBASIC0.29□□□□□ -2.36
TRIM13O60858 AP002795.1-201ENST00000534879 84 ntBASIC0.29□□□□□ -2.36
TRIM13O60858 SNORD114-26-201ENST00000363543 72 ntBASIC0.28□□□□□ -2.36
TRIM13O60858 MIR1273G-201ENST00000577677 100 ntBASIC0.28□□□□□ -2.36
TRIM13O60858 AC010487.4-201ENST00000637027 61 ntBASIC0.28□□□□□ -2.36
TRIM13O60858 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
TRIM13O60858 MIR6851-201ENST00000617060 67 ntBASIC0.27□□□□□ -2.37
TRIM13O60858 MIR4426-201ENST00000640330 63 ntBASIC0.27□□□□□ -2.37
TRIM13O60858 SNORA26.4-201ENST00000391188 123 ntBASIC0.26□□□□□ -2.37
TRIM13O60858 MIR924-201ENST00000638017 53 ntBASIC0.26□□□□□ -2.37
TRIM13O60858 RNA5SP214-201ENST00000363378 118 ntBASIC0.25□□□□□ -2.37
TRIM13O60858 VTRNA1-3-201ENST00000365645 89 ntBASIC0.25□□□□□ -2.37
TRIM13O60858 RNU6-1326P-201ENST00000391262 107 ntBASIC0.25□□□□□ -2.37
TRIM13O60858 RNA5SP169-201ENST00000517268 117 ntBASIC0.25□□□□□ -2.37
TRIM13O60858 MIR5683-201ENST00000636514 76 ntBASIC0.25□□□□□ -2.37
TRIM13O60858 RNU6-1047P-201ENST00000364418 107 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 RNU6-361P-201ENST00000364454 107 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 RNU6-46P-201ENST00000383860 107 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 RNU6-608P-201ENST00000383927 104 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 AL353691.2-201ENST00000443795 59 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 SNORD38.3-201ENST00000516599 73 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 MIR4317-201ENST00000637586 65 ntBASIC0.24□□□□□ -2.37
TRIM13O60858 SNORD114-5-201ENST00000362928 70 ntBASIC0.23□□□□□ -2.37
TRIM13O60858 SNORD114-9-201ENST00000364370 72 ntBASIC0.23□□□□□ -2.37
TRIM13O60858 SNORD74.6-201ENST00000364796 70 ntBASIC0.23□□□□□ -2.37
TRIM13O60858 SNORD49B-201ENST00000365172 72 ntBASIC0.23□□□□□ -2.37
TRIM13O60858 SNORD18.2-201ENST00000459604 70 ntBASIC0.23□□□□□ -2.37
TRIM13O60858 SNORD115-33-201ENST00000363723 82 ntBASIC0.22□□□□□ -2.37
TRIM13O60858 Y_RNA.345-201ENST00000365384 92 ntBASIC0.22□□□□□ -2.37
TRIM13O60858 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
TRIM13O60858 RNY3P8-201ENST00000411366 126 ntBASIC0.21□□□□□ -2.38
TRIM13O60858 MIR202-201ENST00000362219 110 ntBASIC0.2□□□□□ -2.38
TRIM13O60858 RNU6-929P-201ENST00000384429 107 ntBASIC0.2□□□□□ -2.38
TRIM13O60858 MIR6779-201ENST00000617283 64 ntBASIC0.2□□□□□ -2.38
TRIM13O60858 PVT1_3.1-201ENST00000620853 95 ntBASIC0.2□□□□□ -2.38
TRIM13O60858 RNA5SP66-201ENST00000517178 101 ntBASIC0.19□□□□□ -2.38
TRIM13O60858 AL590491.3-201ENST00000610731 82 ntBASIC0.19□□□□□ -2.38
TRIM13O60858 MIR8087-201ENST00000612745 78 ntBASIC0.19□□□□□ -2.38
TRIM13O60858 MIR518B-201ENST00000385127 83 ntBASIC0.18□□□□□ -2.38
TRIM13O60858 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
TRIM13O60858 RNU6-300P-201ENST00000459080 104 ntBASIC0.18□□□□□ -2.38
TRIM13O60858 SNORD22.1-201ENST00000516331 125 ntBASIC0.18□□□□□ -2.38
TRIM13O60858 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
TRIM13O60858 SNORA17.4-201ENST00000391287 132 ntBASIC0.17□□□□□ -2.38
TRIM13O60858 RNY1P9-201ENST00000532431 109 ntBASIC0.17□□□□□ -2.38
TRIM13O60858 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.17□□□□□ -2.38
TRIM13O60858 Y_RNA.115-201ENST00000363272 98 ntBASIC0.16□□□□□ -2.38
TRIM13O60858 SNORD75.1-201ENST00000408373 60 ntBASIC0.16□□□□□ -2.38
TRIM13O60858 AC093726.3-201ENST00000637588 150 ntBASIC0.16□□□□□ -2.38
TRIM13O60858 Y_RNA.206-201ENST00000364136 102 ntBASIC0.15□□□□□ -2.39
TRIM13O60858 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
TRIM13O60858 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
TRIM13O60858 RNA5SP457-201ENST00000363657 124 ntBASIC0.14□□□□□ -2.39
TRIM13O60858 MIR4514-201ENST00000581410 57 ntBASIC0.14□□□□□ -2.39
TRIM13O60858 MIR371B-201ENST00000638082 66 ntBASIC0.14□□□□□ -2.39
TRIM13O60858 MIR330-201ENST00000362196 94 ntBASIC0.13□□□□□ -2.39
TRIM13O60858 SNORD114-17-201ENST00000364699 75 ntBASIC0.13□□□□□ -2.39
TRIM13O60858 RNA5SP63-201ENST00000391225 112 ntBASIC0.12□□□□□ -2.39
TRIM13O60858 AC104692.1-201ENST00000472406 90 ntBASIC0.12□□□□□ -2.39
TRIM13O60858 RNU6-176P-201ENST00000517196 105 ntBASIC0.12□□□□□ -2.39
TRIM13O60858 MIR4290-201ENST00000583807 95 ntBASIC0.12□□□□□ -2.39
TRIM13O60858 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.12□□□□□ -2.39
TRIM13O60858 Y_RNA.189-201ENST00000363959 112 ntBASIC0.11□□□□□ -2.39
TRIM13O60858 MIR4263-201ENST00000584745 83 ntBASIC0.11□□□□□ -2.39
TRIM13O60858 AC138207.3-201ENST00000585289 166 ntBASIC0.11□□□□□ -2.39
TRIM13O60858 MIR1197-201ENST00000408818 88 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 AP000533.3-201ENST00000447704 118 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 SNORA13-201ENST00000458790 133 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 MIR3179-1-201ENST00000578940 84 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 MIR3179-2-201ENST00000579107 84 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 MIR3179-3-201ENST00000579566 84 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 AC023932.2-201ENST00000603176 175 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 MIR3179-4-201ENST00000617599 84 ntBASIC0.1□□□□□ -2.39
TRIM13O60858 SNORD60-201ENST00000383903 83 ntBASIC0.09□□□□□ -2.4
TRIM13O60858 RPL35AP4-201ENST00000412007 102 ntBASIC0.09□□□□□ -2.4
TRIM13O60858 RNA5SP330-201ENST00000517096 96 ntBASIC0.09□□□□□ -2.4
TRIM13O60858 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 174.4 ms