Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 MIR548Q-201ENST00000408404 100 ntBASIC-1.15□□□□□ -2.59
O00370 RNA5SP170-201ENST00000517150 101 ntBASIC-1.15□□□□□ -2.59
O00370 MIR382-201ENST00000637119 76 ntBASIC-1.15□□□□□ -2.59
O00370 MIR429-201ENST00000362106 83 ntBASIC-1.16□□□□□ -2.6
O00370 RNU6-10P-201ENST00000384036 107 ntBASIC-1.16□□□□□ -2.6
O00370 SCARNA17-201ENST00000516183 144 ntBASIC-1.16□□□□□ -2.6
O00370 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.16□□□□□ -2.6
O00370 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.17□□□□□ -2.6
O00370 RNU6-820P-201ENST00000384273 107 ntBASIC-1.17□□□□□ -2.6
O00370 U4.4-201ENST00000620626 117 ntBASIC-1.17□□□□□ -2.6
O00370 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.18□□□□□ -2.6
O00370 MIR507-201ENST00000385234 94 ntBASIC-1.18□□□□□ -2.6
O00370 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.18□□□□□ -2.6
O00370 MIR4666B-201ENST00000578142 81 ntBASIC-1.18□□□□□ -2.6
O00370 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.2□□□□□ -2.6
O00370 SNORD113-2-201ENST00000391082 72 ntBASIC-1.2□□□□□ -2.6
O00370 RNU6-587P-201ENST00000391282 106 ntBASIC-1.2□□□□□ -2.6
O00370 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.21□□□□□ -2.6
O00370 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.21□□□□□ -2.6
O00370 RNA5SP215-201ENST00000363440 122 ntBASIC-1.21□□□□□ -2.6
O00370 MIR601-201ENST00000385256 79 ntBASIC-1.21□□□□□ -2.6
O00370 MIR3134-201ENST00000579433 74 ntBASIC-1.21□□□□□ -2.6
O00370 MIR4499-201ENST00000584834 69 ntBASIC-1.21□□□□□ -2.6
O00370 RNA5SP173-201ENST00000364857 136 ntBASIC-1.22□□□□□ -2.6
O00370 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.22□□□□□ -2.6
O00370 MIR4490-201ENST00000582647 84 ntBASIC-1.22□□□□□ -2.6
O00370 MIR5683-201ENST00000636514 76 ntBASIC-1.23□□□□□ -2.61
O00370 RNU6-1298P-201ENST00000362456 101 ntBASIC-1.24□□□□□ -2.61
O00370 RNU6-787P-201ENST00000384032 107 ntBASIC-1.24□□□□□ -2.61
O00370 MIR4324-201ENST00000584846 72 ntBASIC-1.24□□□□□ -2.61
O00370 SNORD73B-201ENST00000364394 72 ntBASIC-1.25□□□□□ -2.61
O00370 RNU6-696P-201ENST00000390834 107 ntBASIC-1.25□□□□□ -2.61
O00370 SNORD115-31-201ENST00000365318 82 ntBASIC-1.26□□□□□ -2.61
O00370 SNORD19-201ENST00000391191 68 ntBASIC-1.26□□□□□ -2.61
O00370 MIR4723-201ENST00000585070 81 ntBASIC-1.26□□□□□ -2.61
O00370 RPL35AP4-201ENST00000412007 102 ntBASIC-1.27□□□□□ -2.61
O00370 AP002795.1-201ENST00000534879 84 ntBASIC-1.27□□□□□ -2.61
O00370 SNORA26.2-201ENST00000390922 122 ntBASIC-1.28□□□□□ -2.61
O00370 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.28□□□□□ -2.61
O00370 RNU6-411P-201ENST00000384451 107 ntBASIC-1.29□□□□□ -2.62
O00370 U2.18-201ENST00000622185 84 ntBASIC-1.29□□□□□ -2.62
O00370 RNU6-598P-201ENST00000364017 105 ntBASIC-1.3□□□□□ -2.62
O00370 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.3□□□□□ -2.62
O00370 U7.4-201ENST00000614961 63 ntBASIC-1.3□□□□□ -2.62
O00370 RNU6-1255P-201ENST00000363434 112 ntBASIC-1.31□□□□□ -2.62
O00370 RNU6-573P-201ENST00000383938 106 ntBASIC-1.31□□□□□ -2.62
O00370 SNORD116-24-201ENST00000384549 92 ntBASIC-1.31□□□□□ -2.62
O00370 MIR3202-2-201ENST00000635980 79 ntBASIC-1.31□□□□□ -2.62
O00370 RNU6-1124P-201ENST00000384169 107 ntBASIC-1.32□□□□□ -2.62
O00370 RNY4P29-201ENST00000410801 97 ntBASIC-1.32□□□□□ -2.62
O00370 RNU6-687P-201ENST00000516443 89 ntBASIC-1.32□□□□□ -2.62
O00370 SNORD116-16-201ENST00000384533 92 ntBASIC-1.33□□□□□ -2.62
O00370 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.34□□□□□ -2.62
O00370 RNU6-24P-201ENST00000384440 107 ntBASIC-1.34□□□□□ -2.62
O00370 Y_RNA.545-201ENST00000384652 105 ntBASIC-1.34□□□□□ -2.62
O00370 SNORA41B-201ENST00000384785 128 ntBASIC-1.34□□□□□ -2.62
O00370 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.34□□□□□ -2.62
O00370 MIR3165-201ENST00000579874 75 ntBASIC-1.34□□□□□ -2.62
O00370 MIR6818-201ENST00000621576 65 ntBASIC-1.34□□□□□ -2.62
O00370 RNU6-576P-201ENST00000390854 102 ntBASIC-1.35□□□□□ -2.63
O00370 RNA5SP192-201ENST00000364404 120 ntBASIC-1.36□□□□□ -2.63
O00370 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.36□□□□□ -2.63
O00370 RNU6-630P-201ENST00000391258 106 ntBASIC-1.36□□□□□ -2.63
O00370 MIR378F-201ENST00000578143 78 ntBASIC-1.36□□□□□ -2.63
O00370 Y_RNA.388-201ENST00000383919 113 ntBASIC-1.37□□□□□ -2.63
O00370 RNU7-134P-201ENST00000458997 64 ntBASIC-1.37□□□□□ -2.63
O00370 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.38□□□□□ -2.63
O00370 MIR1255A-201ENST00000408338 113 ntBASIC-1.38□□□□□ -2.63
O00370 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.38□□□□□ -2.63
O00370 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.38□□□□□ -2.63
O00370 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.38□□□□□ -2.63
O00370 RNA5SP26-201ENST00000362406 119 ntBASIC-1.39□□□□□ -2.63
O00370 RNU6-228P-201ENST00000362700 106 ntBASIC-1.39□□□□□ -2.63
O00370 SNORD1B-201ENST00000363091 84 ntBASIC-1.39□□□□□ -2.63
O00370 MIR889-201ENST00000401280 79 ntBASIC-1.39□□□□□ -2.63
O00370 Y_RNA.43-201ENST00000362670 111 ntBASIC-1.4□□□□□ -2.63
O00370 MIR29B1-201ENST00000385015 81 ntBASIC-1.4□□□□□ -2.63
O00370 RNU6-663P-201ENST00000391105 106 ntBASIC-1.4□□□□□ -2.63
O00370 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.4□□□□□ -2.63
O00370 RNU6-247P-201ENST00000362636 107 ntBASIC-1.41□□□□□ -2.64
O00370 RNU6-857P-201ENST00000515893 110 ntBASIC-1.41□□□□□ -2.64
O00370 RNU6-542P-201ENST00000516405 103 ntBASIC-1.41□□□□□ -2.64
O00370 MIR548AA1-201ENST00000384971 97 ntBASIC-1.42□□□□□ -2.64
O00370 RNU6-995P-201ENST00000391244 107 ntBASIC-1.42□□□□□ -2.64
O00370 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.42□□□□□ -2.64
O00370 U4.2-201ENST00000618561 85 ntBASIC-1.42□□□□□ -2.64
O00370 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.43□□□□□ -2.64
O00370 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.43□□□□□ -2.64
O00370 RNU6-634P-201ENST00000459134 106 ntBASIC-1.43□□□□□ -2.64
O00370 Y_RNA.443-201ENST00000384135 111 ntBASIC-1.44□□□□□ -2.64
O00370 MIR579-201ENST00000385221 98 ntBASIC-1.44□□□□□ -2.64
O00370 SNORD30.1-201ENST00000391309 70 ntBASIC-1.44□□□□□ -2.64
O00370 RNA5SP225-201ENST00000410874 135 ntBASIC-1.45□□□□□ -2.64
O00370 RNU6-172P-201ENST00000411000 93 ntBASIC-1.45□□□□□ -2.64
O00370 AC090616.4-201ENST00000448026 115 ntBASIC-1.45□□□□□ -2.64
O00370 RNU6-92P-201ENST00000605893 104 ntBASIC-1.45□□□□□ -2.64
O00370 RNU6-540P-201ENST00000384622 101 ntBASIC-1.46□□□□□ -2.64
O00370 MIR520D-201ENST00000385002 87 ntBASIC-1.46□□□□□ -2.64
O00370 MIR3115-201ENST00000577915 68 ntBASIC-1.46□□□□□ -2.64
O00370 MIR4306-201ENST00000583390 91 ntBASIC-1.46□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 175.5 ms