Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SNORD113-2-201ENST00000391082 72 ntBASIC-1.35□□□□□ -2.63
SLC28A1O00337 MIR889-201ENST00000401280 79 ntBASIC-1.35□□□□□ -2.63
SLC28A1O00337 RNU6-789P-201ENST00000517105 102 ntBASIC-1.35□□□□□ -2.63
SLC28A1O00337 MIR4712-201ENST00000583750 82 ntBASIC-1.35□□□□□ -2.63
SLC28A1O00337 MIR6874-201ENST00000635894 71 ntBASIC-1.35□□□□□ -2.63
SLC28A1O00337 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 RNU6-630P-201ENST00000391258 106 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 RNU6-380P-201ENST00000410207 107 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 RNU7-171P-201ENST00000459581 62 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 RNA5SP476-201ENST00000516613 103 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 Y_RNA.788-201ENST00000622394 112 ntBASIC-1.36□□□□□ -2.63
SLC28A1O00337 RNA5SP215-201ENST00000363440 122 ntBASIC-1.37□□□□□ -2.63
SLC28A1O00337 RNU6-1241P-201ENST00000384536 107 ntBASIC-1.38□□□□□ -2.63
SLC28A1O00337 SNORA41B-201ENST00000384785 128 ntBASIC-1.38□□□□□ -2.63
SLC28A1O00337 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.38□□□□□ -2.63
SLC28A1O00337 RNY4P30-201ENST00000410216 95 ntBASIC-1.38□□□□□ -2.63
SLC28A1O00337 MIR429-201ENST00000362106 83 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 RNU6-608P-201ENST00000383927 104 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 MIR3165-201ENST00000579874 75 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 MIR1245B-201ENST00000636115 69 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 U2.22-201ENST00000636441 106 ntBASIC-1.39□□□□□ -2.63
SLC28A1O00337 MIR494-201ENST00000349529 81 ntBASIC-1.4□□□□□ -2.63
SLC28A1O00337 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.4□□□□□ -2.63
SLC28A1O00337 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.4□□□□□ -2.63
SLC28A1O00337 SNORD116-16-201ENST00000384533 92 ntBASIC-1.4□□□□□ -2.63
SLC28A1O00337 SNORD116-24-201ENST00000384549 92 ntBASIC-1.4□□□□□ -2.63
SLC28A1O00337 RNU6-153P-201ENST00000364422 104 ntBASIC-1.41□□□□□ -2.64
SLC28A1O00337 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.42□□□□□ -2.64
SLC28A1O00337 HAR1A.1-201ENST00000459583 118 ntBASIC-1.42□□□□□ -2.64
SLC28A1O00337 SNORD1B-201ENST00000363091 84 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 SNORD115-31-201ENST00000365318 82 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 RNU6-70P-201ENST00000516438 60 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 MIR3134-201ENST00000579433 74 ntBASIC-1.43□□□□□ -2.64
SLC28A1O00337 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.45□□□□□ -2.64
SLC28A1O00337 MIR548AI-201ENST00000579940 88 ntBASIC-1.45□□□□□ -2.64
SLC28A1O00337 MIR3170-201ENST00000582699 77 ntBASIC-1.45□□□□□ -2.64
SLC28A1O00337 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.46□□□□□ -2.64
SLC28A1O00337 RNU6-787P-201ENST00000384032 107 ntBASIC-1.46□□□□□ -2.64
SLC28A1O00337 MIR154-201ENST00000385243 84 ntBASIC-1.46□□□□□ -2.64
SLC28A1O00337 MIR6502-201ENST00000617296 76 ntBASIC-1.46□□□□□ -2.64
SLC28A1O00337 MIR409-201ENST00000362237 79 ntBASIC-1.47□□□□□ -2.64
SLC28A1O00337 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.47□□□□□ -2.64
SLC28A1O00337 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.47□□□□□ -2.64
SLC28A1O00337 RNU6-706P-201ENST00000517229 104 ntBASIC-1.47□□□□□ -2.64
SLC28A1O00337 RNU6-258P-201ENST00000390884 101 ntBASIC-1.48□□□□□ -2.65
SLC28A1O00337 RNA5SP173-201ENST00000364857 136 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 RNU6-294P-201ENST00000364999 102 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 MIR548AA1-201ENST00000384971 97 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 MIR450A2-201ENST00000385022 100 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 AC018880.2-201ENST00000414265 201 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 MIR4666B-201ENST00000578142 81 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 MIR4520-1-201ENST00000582609 70 ntBASIC-1.49□□□□□ -2.65
SLC28A1O00337 RNU6-687P-201ENST00000516443 89 ntBASIC-1.5□□□□□ -2.65
SLC28A1O00337 AC138207.3-201ENST00000585289 166 ntBASIC-1.5□□□□□ -2.65
SLC28A1O00337 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.5□□□□□ -2.65
SLC28A1O00337 RNU6-79P-201ENST00000362511 107 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 RNU6-895P-201ENST00000384125 103 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 RNU6-242P-201ENST00000384359 107 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 RNA5SP266-201ENST00000410273 108 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 RNA5SP461-201ENST00000516451 104 ntBASIC-1.51□□□□□ -2.65
SLC28A1O00337 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-1.52□□□□□ -2.65
SLC28A1O00337 MIR5582-201ENST00000579697 68 ntBASIC-1.52□□□□□ -2.65
SLC28A1O00337 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.52□□□□□ -2.65
SLC28A1O00337 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.53□□□□□ -2.65
SLC28A1O00337 RNU7-151P-201ENST00000516930 53 ntBASIC-1.53□□□□□ -2.65
SLC28A1O00337 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.53□□□□□ -2.65
SLC28A1O00337 MIR579-201ENST00000385221 98 ntBASIC-1.54□□□□□ -2.66
SLC28A1O00337 RNA5SP180-201ENST00000516181 101 ntBASIC-1.54□□□□□ -2.66
SLC28A1O00337 AC062037.1-201ENST00000605302 128 ntBASIC-1.54□□□□□ -2.66
SLC28A1O00337 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.55□□□□□ -2.66
SLC28A1O00337 RNU6-172P-201ENST00000411000 93 ntBASIC-1.55□□□□□ -2.66
SLC28A1O00337 RNU6-563P-201ENST00000364872 108 ntBASIC-1.56□□□□□ -2.66
SLC28A1O00337 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
SLC28A1O00337 MIR5591-201ENST00000578248 65 ntBASIC-1.56□□□□□ -2.66
SLC28A1O00337 MIR7978-201ENST00000636158 59 ntBASIC-1.56□□□□□ -2.66
SLC28A1O00337 RNU6-247P-201ENST00000362636 107 ntBASIC-1.57□□□□□ -2.66
SLC28A1O00337 RNU6-1015P-201ENST00000517121 99 ntBASIC-1.57□□□□□ -2.66
SLC28A1O00337 RNU6-400P-201ENST00000391173 106 ntBASIC-1.58□□□□□ -2.66
SLC28A1O00337 HLA-S-202ENST00000425174 53 ntBASIC-1.58□□□□□ -2.66
SLC28A1O00337 AC120024.2-201ENST00000576526 175 ntBASIC-1.58□□□□□ -2.66
SLC28A1O00337 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.59□□□□□ -2.66
SLC28A1O00337 RNU6-542P-201ENST00000516405 103 ntBASIC-1.59□□□□□ -2.66
SLC28A1O00337 RNU6-669P-201ENST00000365575 107 ntBASIC-1.6□□□□□ -2.67
SLC28A1O00337 RNU6-995P-201ENST00000391244 107 ntBASIC-1.6□□□□□ -2.67
SLC28A1O00337 RNU6-411P-201ENST00000384451 107 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 MIR125B1-201ENST00000385236 88 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 SNORD63.2-201ENST00000516303 64 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 RNU6-92P-201ENST00000605893 104 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.61□□□□□ -2.67
SLC28A1O00337 RNU6-974P-201ENST00000384099 108 ntBASIC-1.62□□□□□ -2.67
SLC28A1O00337 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.62□□□□□ -2.67
SLC28A1O00337 RNU6-820P-201ENST00000384273 107 ntBASIC-1.62□□□□□ -2.67
SLC28A1O00337 MIR4770-201ENST00000579149 58 ntBASIC-1.62□□□□□ -2.67
SLC28A1O00337 MIR23C-201ENST00000579846 100 ntBASIC-1.62□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 378.2 ms