Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNA5SP255-201ENST00000516370 107 ntBASIC1.19□□□□□ -2.22
COL17A1Q9UMD9 U7.5-201ENST00000517224 61 ntBASIC1.19□□□□□ -2.22
COL17A1Q9UMD9 MIR7107-201ENST00000611489 80 ntBASIC1.19□□□□□ -2.22
COL17A1Q9UMD9 RNU6-502P-201ENST00000362419 108 ntBASIC1.18□□□□□ -2.22
COL17A1Q9UMD9 MTRNR2L9-201ENST00000622562 75 ntBASIC1.18□□□□□ -2.22
COL17A1Q9UMD9 MIR4432-201ENST00000581823 84 ntBASIC1.18□□□□□ -2.22
COL17A1Q9UMD9 AC108676.2-201ENST00000605225 163 ntBASIC1.18□□□□□ -2.22
COL17A1Q9UMD9 SNORD57-201ENST00000448188 72 ntBASIC1.17□□□□□ -2.22
COL17A1Q9UMD9 SNORD2-201ENST00000459163 69 ntBASIC1.17□□□□□ -2.22
COL17A1Q9UMD9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.17□□□□□ -2.22
COL17A1Q9UMD9 Y_RNA.698-201ENST00000516798 118 ntBASIC1.17□□□□□ -2.22
COL17A1Q9UMD9 RNU7-188P-201ENST00000517063 64 ntBASIC1.17□□□□□ -2.22
COL17A1Q9UMD9 RNU6-485P-201ENST00000363475 107 ntBASIC1.16□□□□□ -2.22
COL17A1Q9UMD9 SNORD114-2-201ENST00000363953 78 ntBASIC1.16□□□□□ -2.22
COL17A1Q9UMD9 RNU6-133P-201ENST00000383989 107 ntBASIC1.16□□□□□ -2.22
COL17A1Q9UMD9 RNU6-175P-201ENST00000516896 107 ntBASIC1.16□□□□□ -2.22
COL17A1Q9UMD9 MIR6835-201ENST00000621552 64 ntBASIC1.16□□□□□ -2.22
COL17A1Q9UMD9 SNORD114-29-201ENST00000364819 70 ntBASIC1.15□□□□□ -2.23
COL17A1Q9UMD9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.15□□□□□ -2.23
COL17A1Q9UMD9 MIR4317-201ENST00000637586 65 ntBASIC1.15□□□□□ -2.23
COL17A1Q9UMD9 MIR18A-201ENST00000362310 71 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 RNU6-1036P-201ENST00000383959 104 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 SNORD99-201ENST00000408612 74 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 RNU6-1174P-201ENST00000517278 101 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 AC011195.1-201ENST00000578177 177 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 MIR3170-201ENST00000582699 77 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 RNU1-29P-201ENST00000606574 126 ntBASIC1.14□□□□□ -2.23
COL17A1Q9UMD9 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
COL17A1Q9UMD9 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
COL17A1Q9UMD9 SNORD63.1-201ENST00000516178 80 ntBASIC1.12□□□□□ -2.23
COL17A1Q9UMD9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
COL17A1Q9UMD9 MIR6507-201ENST00000613630 70 ntBASIC1.11□□□□□ -2.23
COL17A1Q9UMD9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC1.1□□□□□ -2.23
COL17A1Q9UMD9 AC069271.1-201ENST00000445577 156 ntBASIC1.1□□□□□ -2.23
COL17A1Q9UMD9 MIR5706-201ENST00000579841 80 ntBASIC1.1□□□□□ -2.23
COL17A1Q9UMD9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
COL17A1Q9UMD9 RNA5SP347-201ENST00000362445 119 ntBASIC1.09□□□□□ -2.24
COL17A1Q9UMD9 RNU6-1047P-201ENST00000364418 107 ntBASIC1.09□□□□□ -2.24
COL17A1Q9UMD9 RNU6-1232P-201ENST00000516299 86 ntBASIC1.09□□□□□ -2.24
COL17A1Q9UMD9 MIR6888-201ENST00000621977 67 ntBASIC1.09□□□□□ -2.24
COL17A1Q9UMD9 SNORD115-23-201ENST00000364461 82 ntBASIC1.08□□□□□ -2.24
COL17A1Q9UMD9 RNU6-258P-201ENST00000390884 101 ntBASIC1.08□□□□□ -2.24
COL17A1Q9UMD9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.08□□□□□ -2.24
COL17A1Q9UMD9 RNU6-351P-201ENST00000516097 100 ntBASIC1.07□□□□□ -2.24
COL17A1Q9UMD9 RNA5SP222-201ENST00000411039 105 ntBASIC1.06□□□□□ -2.24
COL17A1Q9UMD9 MIR4464-201ENST00000580818 92 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 RN7SL660P-201ENST00000614852 299 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 MIR4426-201ENST00000640330 63 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 Y_RNA.321-201ENST00000365149 102 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 RNU6-1111P-201ENST00000391118 107 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 AP000676.1-201ENST00000533307 52 ntBASIC1.05□□□□□ -2.24
COL17A1Q9UMD9 MIR1468-201ENST00000410600 86 ntBASIC1.04□□□□□ -2.24
COL17A1Q9UMD9 RNU6-229P-201ENST00000516614 102 ntBASIC1.03□□□□□ -2.24
COL17A1Q9UMD9 AL445584.3-201ENST00000617173 78 ntBASIC1.03□□□□□ -2.24
COL17A1Q9UMD9 AC084368.1-201ENST00000620935 65 ntBASIC1.03□□□□□ -2.24
COL17A1Q9UMD9 snoR1.1-201ENST00000628177 80 ntBASIC1.03□□□□□ -2.24
COL17A1Q9UMD9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL17A1Q9UMD9 SNORA2A-201ENST00000383885 135 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 Y_RNA.423-201ENST00000384057 113 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 RNU6-300P-201ENST00000459080 104 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 RNA5SP285-201ENST00000516619 119 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 RNU6-1238P-201ENST00000517215 102 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 MIR4677-201ENST00000584153 80 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 uc_338.36-201ENST00000622331 158 ntBASIC1.01□□□□□ -2.25
COL17A1Q9UMD9 RNA5SP517-201ENST00000364724 117 ntBASIC1□□□□□ -2.25
COL17A1Q9UMD9 SNORA36.2-201ENST00000384004 127 ntBASIC1□□□□□ -2.25
COL17A1Q9UMD9 MIR520D-201ENST00000385002 87 ntBASIC1□□□□□ -2.25
COL17A1Q9UMD9 MIR6759-201ENST00000638110 65 ntBASIC1□□□□□ -2.25
COL17A1Q9UMD9 SNORA25.18-201ENST00000607153 114 ntBASIC0.99□□□□□ -2.25
COL17A1Q9UMD9 MIR548Q-201ENST00000408404 100 ntBASIC0.99□□□□□ -2.25
COL17A1Q9UMD9 U7.6-201ENST00000610841 64 ntBASIC0.99□□□□□ -2.25
COL17A1Q9UMD9 MIR501-201ENST00000390204 84 ntBASIC0.98□□□□□ -2.25
COL17A1Q9UMD9 Y_RNA.699-201ENST00000516803 93 ntBASIC0.98□□□□□ -2.25
COL17A1Q9UMD9 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
COL17A1Q9UMD9 Y_RNA.613-201ENST00000410726 97 ntBASIC0.97□□□□□ -2.25
COL17A1Q9UMD9 AC104408.1-201ENST00000605241 170 ntBASIC0.97□□□□□ -2.25
COL17A1Q9UMD9 MIR202-201ENST00000362219 110 ntBASIC0.96□□□□□ -2.26
COL17A1Q9UMD9 SNORA27.2-201ENST00000363365 126 ntBASIC0.96□□□□□ -2.26
COL17A1Q9UMD9 RNA5SP331-201ENST00000364986 107 ntBASIC0.96□□□□□ -2.26
COL17A1Q9UMD9 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
COL17A1Q9UMD9 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
COL17A1Q9UMD9 RNU6-732P-201ENST00000516033 103 ntBASIC0.95□□□□□ -2.26
COL17A1Q9UMD9 MIR3925-201ENST00000584674 77 ntBASIC0.95□□□□□ -2.26
COL17A1Q9UMD9 MIR4653-201ENST00000585107 83 ntBASIC0.95□□□□□ -2.26
COL17A1Q9UMD9 RNU6-110P-201ENST00000384508 104 ntBASIC0.94□□□□□ -2.26
COL17A1Q9UMD9 MIR140-201ENST00000385282 100 ntBASIC0.94□□□□□ -2.26
COL17A1Q9UMD9 SNORD19-201ENST00000391191 68 ntBASIC0.94□□□□□ -2.26
COL17A1Q9UMD9 AC023932.2-201ENST00000603176 175 ntBASIC0.94□□□□□ -2.26
COL17A1Q9UMD9 MIR6866-201ENST00000638146 69 ntBASIC0.94□□□□□ -2.26
COL17A1Q9UMD9 RNU6-361P-201ENST00000364454 107 ntBASIC0.93□□□□□ -2.26
COL17A1Q9UMD9 RNA5SP63-201ENST00000391225 112 ntBASIC0.93□□□□□ -2.26
COL17A1Q9UMD9 RNA5SP25-201ENST00000410815 110 ntBASIC0.93□□□□□ -2.26
COL17A1Q9UMD9 RNY3P8-201ENST00000411366 126 ntBASIC0.93□□□□□ -2.26
COL17A1Q9UMD9 AL391099.1-201ENST00000624635 187 ntBASIC0.93□□□□□ -2.26
COL17A1Q9UMD9 SNORA62.4-201ENST00000365504 151 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 SNORD71-201ENST00000411292 86 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 RNU4-54P-201ENST00000516428 129 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 MIR6755-201ENST00000619993 66 ntBASIC0.92□□□□□ -2.26
COL17A1Q9UMD9 SNORD118-201ENST00000363593 134 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms