Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC243829.6-201ENST00000612652 106 ntBASIC0.72□□□□□ -2.29
SALL3Q9BXA9 MIR520D-201ENST00000385002 87 ntBASIC0.71□□□□□ -2.3
SALL3Q9BXA9 MIRLET7B-201ENST00000385140 83 ntBASIC0.71□□□□□ -2.3
SALL3Q9BXA9 SNORA62.5-201ENST00000516634 120 ntBASIC0.71□□□□□ -2.3
SALL3Q9BXA9 RNU6-502P-201ENST00000362419 108 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 SNORD114-4-201ENST00000363962 75 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 Y_RNA.345-201ENST00000365384 92 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 RNY1P8-201ENST00000383970 114 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 RNU7-154P-201ENST00000516194 62 ntBASIC0.7□□□□□ -2.3
SALL3Q9BXA9 RNA5SP193-201ENST00000410353 107 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU6-848P-201ENST00000515948 107 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU6-617P-201ENST00000516147 107 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU6-473P-201ENST00000516164 107 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU7-160P-201ENST00000516660 62 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 MIR5706-201ENST00000579841 80 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 MIR6888-201ENST00000621977 67 ntBASIC0.69□□□□□ -2.3
SALL3Q9BXA9 RNU6-1204P-201ENST00000363948 107 ntBASIC0.68□□□□□ -2.3
SALL3Q9BXA9 SNORD115-23-201ENST00000364461 82 ntBASIC0.68□□□□□ -2.3
SALL3Q9BXA9 RNU6-696P-201ENST00000390834 107 ntBASIC0.68□□□□□ -2.3
SALL3Q9BXA9 SNORD118-201ENST00000363593 134 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 RNA5SP517-201ENST00000364724 117 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 SNORA36.2-201ENST00000384004 127 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 RNU6-1326P-201ENST00000391262 107 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 SNORD110-201ENST00000408189 75 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 SNORD57-201ENST00000448188 72 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 RNU7-88P-201ENST00000458752 63 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 U7.5-201ENST00000517224 61 ntBASIC0.67□□□□□ -2.3
SALL3Q9BXA9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
SALL3Q9BXA9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
SALL3Q9BXA9 MIR329-2-201ENST00000385029 84 ntBASIC0.66□□□□□ -2.3
SALL3Q9BXA9 MIR92A1-201ENST00000385233 78 ntBASIC0.66□□□□□ -2.3
SALL3Q9BXA9 RNA5SP285-201ENST00000516619 119 ntBASIC0.66□□□□□ -2.3
SALL3Q9BXA9 RNU6-782P-201ENST00000516852 104 ntBASIC0.66□□□□□ -2.3
SALL3Q9BXA9 AL353803.5-201ENST00000599815 141 ntBASIC0.66□□□□□ -2.3
SALL3Q9BXA9 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 SNORA40.8-201ENST00000411034 126 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 RNU6-300P-201ENST00000459080 104 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 RNU7-188P-201ENST00000517063 64 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 RNU6-1174P-201ENST00000517278 101 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 AP002795.1-201ENST00000534879 84 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 MIR3170-201ENST00000582699 77 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 RN7SL660P-201ENST00000614852 299 ntBASIC0.65□□□□□ -2.3
SALL3Q9BXA9 RNU6-828P-201ENST00000364876 107 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 RNU6-530P-201ENST00000391180 107 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 AC069271.1-201ENST00000445577 156 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 SNORD63.2-201ENST00000516303 64 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 MIR4432-201ENST00000581823 84 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 AL627230.5-201ENST00000619807 58 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 SNORD19-201ENST00000391191 68 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 MIR6507-201ENST00000613630 70 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 MIR6755-201ENST00000619993 66 ntBASIC0.64□□□□□ -2.31
SALL3Q9BXA9 MIR548AA1-201ENST00000384971 97 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 MIR501-201ENST00000390204 84 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 MIR3925-201ENST00000584674 77 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 AL445584.3-201ENST00000617173 78 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 MIR8068-201ENST00000618032 68 ntBASIC0.63□□□□□ -2.31
SALL3Q9BXA9 RNU6-1036P-201ENST00000383959 104 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 MIR518A1-201ENST00000385068 85 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 AC244090.1-201ENST00000441884 93 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 U7.6-201ENST00000610841 64 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.62□□□□□ -2.31
SALL3Q9BXA9 SNORA2A-201ENST00000383885 135 ntBASIC0.61□□□□□ -2.31
SALL3Q9BXA9 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
SALL3Q9BXA9 AC108676.2-201ENST00000605225 163 ntBASIC0.61□□□□□ -2.31
SALL3Q9BXA9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
SALL3Q9BXA9 MIR20A-201ENST00000362279 71 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 RNA5SP63-201ENST00000391225 112 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 RNY3P8-201ENST00000411366 126 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 RNU6-68P-201ENST00000516576 104 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 MIR4677-201ENST00000584153 80 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 SNORA25.18-201ENST00000607153 114 ntBASIC0.6□□□□□ -2.31
SALL3Q9BXA9 RNU6-1047P-201ENST00000364418 107 ntBASIC0.59□□□□□ -2.32
SALL3Q9BXA9 MIR581-201ENST00000384895 96 ntBASIC0.59□□□□□ -2.32
SALL3Q9BXA9 MIR643-201ENST00000385267 97 ntBASIC0.58□□□□□ -2.32
SALL3Q9BXA9 RNA5SP470-201ENST00000516463 106 ntBASIC0.58□□□□□ -2.32
SALL3Q9BXA9 RNU6-229P-201ENST00000516614 102 ntBASIC0.58□□□□□ -2.32
SALL3Q9BXA9 MIR5704-201ENST00000584029 77 ntBASIC0.58□□□□□ -2.32
SALL3Q9BXA9 VTRNA1-3-201ENST00000365645 89 ntBASIC0.57□□□□□ -2.32
SALL3Q9BXA9 SNORA50A-201ENST00000384225 134 ntBASIC0.57□□□□□ -2.32
SALL3Q9BXA9 MIR4426-201ENST00000640330 63 ntBASIC0.57□□□□□ -2.32
SALL3Q9BXA9 RNU6-608P-201ENST00000383927 104 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 RNU6-133P-201ENST00000383989 107 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 MIR548T-201ENST00000408369 74 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 RNU6-1238P-201ENST00000517215 102 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 MIR2909-201ENST00000617113 69 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 uc_338.36-201ENST00000622331 158 ntBASIC0.56□□□□□ -2.32
SALL3Q9BXA9 MIR202-201ENST00000362219 110 ntBASIC0.55□□□□□ -2.32
SALL3Q9BXA9 SNORD63.1-201ENST00000516178 80 ntBASIC0.55□□□□□ -2.32
SALL3Q9BXA9 AC023932.2-201ENST00000603176 175 ntBASIC0.55□□□□□ -2.32
SALL3Q9BXA9 SNORA42.1-201ENST00000363515 137 ntBASIC0.54□□□□□ -2.32
SALL3Q9BXA9 RNU6-995P-201ENST00000391244 107 ntBASIC0.54□□□□□ -2.32
SALL3Q9BXA9 MIR876-201ENST00000401147 81 ntBASIC0.54□□□□□ -2.32
SALL3Q9BXA9 RNU6-732P-201ENST00000516033 103 ntBASIC0.54□□□□□ -2.32
SALL3Q9BXA9 AP000676.1-201ENST00000533307 52 ntBASIC0.54□□□□□ -2.32
SALL3Q9BXA9 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms