Protein–RNA interactions for Protein: P54852

EMP3, Epithelial membrane protein 3, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EMP3P54852 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.19
EMP3P54852 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
EMP3P54852 Y_RNA.164-201ENST00000363709 102 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNA5SP247-201ENST00000411181 105 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNU6-68P-201ENST00000516576 104 ntBASIC1.33□□□□□ -2.2
EMP3P54852 MIR499B-201ENST00000636498 73 ntBASIC1.33□□□□□ -2.2
EMP3P54852 RNU6-836P-201ENST00000362920 107 ntBASIC1.32□□□□□ -2.2
EMP3P54852 RNU6-900P-201ENST00000384498 102 ntBASIC1.32□□□□□ -2.2
EMP3P54852 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
EMP3P54852 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.32□□□□□ -2.2
EMP3P54852 Y_RNA.676-201ENST00000516393 96 ntBASIC1.31□□□□□ -2.2
EMP3P54852 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
EMP3P54852 MIR581-201ENST00000384895 96 ntBASIC1.3□□□□□ -2.2
EMP3P54852 MIR5683-201ENST00000636514 76 ntBASIC1.3□□□□□ -2.2
EMP3P54852 SNORD71-201ENST00000411292 86 ntBASIC1.29□□□□□ -2.2
EMP3P54852 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.29□□□□□ -2.2
EMP3P54852 MIR6854-201ENST00000614935 69 ntBASIC1.29□□□□□ -2.2
EMP3P54852 RNA5SP224-201ENST00000365069 126 ntBASIC1.27□□□□□ -2.21
EMP3P54852 MIR3660-201ENST00000584845 100 ntBASIC1.27□□□□□ -2.21
EMP3P54852 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.27□□□□□ -2.21
EMP3P54852 Y_RNA.129-201ENST00000363392 110 ntBASIC1.26□□□□□ -2.21
EMP3P54852 AC108740.1-201ENST00000498629 225 ntBASIC1.26□□□□□ -2.21
EMP3P54852 AL353770.2-201ENST00000620024 78 ntBASIC1.26□□□□□ -2.21
EMP3P54852 Y_RNA.260-201ENST00000364628 101 ntBASIC1.25□□□□□ -2.21
EMP3P54852 Y_RNA.406-201ENST00000383984 100 ntBASIC1.25□□□□□ -2.21
EMP3P54852 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
EMP3P54852 RNU7-129P-201ENST00000516128 62 ntBASIC1.25□□□□□ -2.21
EMP3P54852 RNU6-321P-201ENST00000410912 106 ntBASIC1.24□□□□□ -2.21
EMP3P54852 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
EMP3P54852 AC114755.3-201ENST00000481111 251 ntBASIC1.24□□□□□ -2.21
EMP3P54852 AC013734.1-201ENST00000619329 111 ntBASIC1.24□□□□□ -2.21
EMP3P54852 Y_RNA.223-201ENST00000364290 113 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNU6-939P-201ENST00000384634 107 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNU6-455P-201ENST00000384681 107 ntBASIC1.23□□□□□ -2.21
EMP3P54852 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC1.23□□□□□ -2.21
EMP3P54852 RNA5SP325-201ENST00000363756 130 ntBASIC1.22□□□□□ -2.21
EMP3P54852 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
EMP3P54852 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
EMP3P54852 RNU6-392P-201ENST00000364926 101 ntBASIC1.21□□□□□ -2.22
EMP3P54852 AL353691.2-201ENST00000443795 59 ntBASIC1.2□□□□□ -2.22
EMP3P54852 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
EMP3P54852 SNORD56B-201ENST00000384713 71 ntBASIC1.19□□□□□ -2.22
EMP3P54852 SNORA26.4-201ENST00000391188 123 ntBASIC1.19□□□□□ -2.22
EMP3P54852 MIR151B-201ENST00000584249 96 ntBASIC1.19□□□□□ -2.22
EMP3P54852 MIR6078-201ENST00000611069 100 ntBASIC1.18□□□□□ -2.22
EMP3P54852 uc_338.17-201ENST00000619633 179 ntBASIC1.18□□□□□ -2.22
EMP3P54852 RPL35AP4-201ENST00000412007 102 ntBASIC1.17□□□□□ -2.22
EMP3P54852 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
EMP3P54852 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
EMP3P54852 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
EMP3P54852 MIR1197-201ENST00000408818 88 ntBASIC1.14□□□□□ -2.23
EMP3P54852 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
EMP3P54852 MIR520E-201ENST00000384867 87 ntBASIC1.13□□□□□ -2.23
EMP3P54852 MIR8070-201ENST00000616510 88 ntBASIC1.13□□□□□ -2.23
EMP3P54852 MIR548AJ2-201ENST00000408539 92 ntBASIC1.12□□□□□ -2.23
EMP3P54852 MIR6514-201ENST00000622549 70 ntBASIC1.12□□□□□ -2.23
EMP3P54852 SNORD115-33-201ENST00000363723 82 ntBASIC1.11□□□□□ -2.23
EMP3P54852 Y_RNA.226-201ENST00000364337 114 ntBASIC1.11□□□□□ -2.23
EMP3P54852 SNORD45C-201ENST00000383893 79 ntBASIC1.11□□□□□ -2.23
EMP3P54852 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC1.11□□□□□ -2.23
EMP3P54852 FTX_4.1-201ENST00000616291 147 ntBASIC1.11□□□□□ -2.23
EMP3P54852 U6.97-201ENST00000636904 101 ntBASIC1.11□□□□□ -2.23
EMP3P54852 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
EMP3P54852 RNU6-1169P-201ENST00000363537 103 ntBASIC1.1□□□□□ -2.23
EMP3P54852 RNU6-901P-201ENST00000384593 106 ntBASIC1.1□□□□□ -2.23
EMP3P54852 MIR379-201ENST00000362218 67 ntBASIC1.09□□□□□ -2.23
EMP3P54852 MIR1287-201ENST00000408492 90 ntBASIC1.09□□□□□ -2.23
EMP3P54852 MIR548J-201ENST00000408833 112 ntBASIC1.09□□□□□ -2.23
EMP3P54852 RNU6-863P-201ENST00000515989 104 ntBASIC1.09□□□□□ -2.23
EMP3P54852 Y_RNA.335-201ENST00000365299 96 ntBASIC1.08□□□□□ -2.24
EMP3P54852 MIR499A-201ENST00000384903 122 ntBASIC1.07□□□□□ -2.24
EMP3P54852 RNU6-127P-201ENST00000390897 107 ntBASIC1.07□□□□□ -2.24
EMP3P54852 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
EMP3P54852 AC103810.9-201ENST00000606688 112 ntBASIC1.07□□□□□ -2.24
EMP3P54852 MIR5087-201ENST00000635826 76 ntBASIC1.07□□□□□ -2.24
EMP3P54852 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
EMP3P54852 RNU6-929P-201ENST00000384429 107 ntBASIC1.06□□□□□ -2.24
EMP3P54852 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.06□□□□□ -2.24
EMP3P54852 CR383656.4-201ENST00000546909 122 ntBASIC1.06□□□□□ -2.24
EMP3P54852 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
EMP3P54852 RNU6-563P-201ENST00000364872 108 ntBASIC1.05□□□□□ -2.24
EMP3P54852 MIR608-201ENST00000384820 100 ntBASIC1.05□□□□□ -2.24
EMP3P54852 RNU6-695P-201ENST00000391157 104 ntBASIC1.05□□□□□ -2.24
EMP3P54852 Y_RNA.603-201ENST00000410571 108 ntBASIC1.05□□□□□ -2.24
EMP3P54852 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
EMP3P54852 SNORD44.1-201ENST00000363202 61 ntBASIC1.04□□□□□ -2.24
EMP3P54852 RNA5SP102-201ENST00000516865 106 ntBASIC1.04□□□□□ -2.24
EMP3P54852 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
EMP3P54852 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
EMP3P54852 SNORD18.2-201ENST00000459604 70 ntBASIC1.03□□□□□ -2.24
EMP3P54852 MIR148A-201ENST00000362215 68 ntBASIC1.02□□□□□ -2.25
EMP3P54852 MIR4280-201ENST00000582178 76 ntBASIC1.02□□□□□ -2.25
EMP3P54852 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
EMP3P54852 MIR23C-201ENST00000579846 100 ntBASIC1.01□□□□□ -2.25
EMP3P54852 MIR1276-201ENST00000408707 83 ntBASIC1□□□□□ -2.25
EMP3P54852 AC120024.2-201ENST00000576526 175 ntBASIC1□□□□□ -2.25
EMP3P54852 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1□□□□□ -2.25
EMP3P54852 AL445193.1-201ENST00000441183 141 ntBASIC0.99□□□□□ -2.25
EMP3P54852 MIR6504-201ENST00000613520 61 ntBASIC0.99□□□□□ -2.25
EMP3P54852 SNORD18C-201ENST00000362704 69 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms