Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 MIR429-201ENST00000362106 83 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 Y_RNA.266-201ENST00000364678 96 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 SNORD113-3-201ENST00000364830 72 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 RNU6-813P-201ENST00000384691 107 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 MIR548F4-201ENST00000408515 105 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 RNU6-519P-201ENST00000410590 108 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 U6.97-201ENST00000636904 101 ntBASIC-1.81□□□□□ -2.7
SHOX2O60902 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.82□□□□□ -2.7
SHOX2O60902 AL731768.1-201ENST00000603124 139 ntBASIC-1.82□□□□□ -2.7
SHOX2O60902 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.82□□□□□ -2.7
SHOX2O60902 RNU5F-1-201ENST00000362507 117 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 RNU6-68P-201ENST00000516576 104 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 U2.18-201ENST00000622185 84 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 AP001340.1-201ENST00000624405 217 ntBASIC-1.83□□□□□ -2.7
SHOX2O60902 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.84□□□□□ -2.7
SHOX2O60902 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.84□□□□□ -2.7
SHOX2O60902 MIR125B1-201ENST00000385236 88 ntBASIC-1.84□□□□□ -2.7
SHOX2O60902 AC025166.1-201ENST00000612411 163 ntBASIC-1.84□□□□□ -2.7
SHOX2O60902 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.84□□□□□ -2.7
SHOX2O60902 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 SNORD45B-201ENST00000364617 72 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 RNU6-523P-201ENST00000516304 54 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 AL035470.1-201ENST00000622571 220 ntBASIC-1.85□□□□□ -2.71
SHOX2O60902 RNU6-698P-201ENST00000363523 107 ntBASIC-1.86□□□□□ -2.71
SHOX2O60902 RNU6-34P-201ENST00000364874 107 ntBASIC-1.86□□□□□ -2.71
SHOX2O60902 RNU6-828P-201ENST00000364876 107 ntBASIC-1.86□□□□□ -2.71
SHOX2O60902 U4.4-201ENST00000620626 117 ntBASIC-1.86□□□□□ -2.71
SHOX2O60902 SNORD58C-201ENST00000365223 64 ntBASIC-1.87□□□□□ -2.71
SHOX2O60902 RNY3P8-201ENST00000411366 126 ntBASIC-1.87□□□□□ -2.71
SHOX2O60902 MTCYBP6-201ENST00000441810 138 ntBASIC-1.87□□□□□ -2.71
SHOX2O60902 RNU6-111P-201ENST00000517179 105 ntBASIC-1.87□□□□□ -2.71
SHOX2O60902 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-1.87□□□□□ -2.71
SHOX2O60902 SNORD114-13-201ENST00000364377 74 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 RNU6-669P-201ENST00000365575 107 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 RNU6-1324P-201ENST00000384222 107 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 SNORD116-16-201ENST00000384533 92 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 MIR4679-2-201ENST00000578358 77 ntBASIC-1.88□□□□□ -2.71
SHOX2O60902 RNU6-340P-201ENST00000364005 107 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 RNU6-361P-201ENST00000364454 107 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 RNU6-645P-201ENST00000364649 106 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 RNU6-800P-201ENST00000384473 103 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 Y_RNA.652-201ENST00000458902 102 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 MIR3128-201ENST00000581957 66 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 MIR4801-201ENST00000582704 82 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 MIR4777-201ENST00000583710 86 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 AC072026.1-201ENST00000605023 201 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 MIR7978-201ENST00000636158 59 ntBASIC-1.89□□□□□ -2.71
SHOX2O60902 MIR379-201ENST00000362218 67 ntBASIC-1.9□□□□□ -2.71
SHOX2O60902 Y_RNA.321-201ENST00000365149 102 ntBASIC-1.9□□□□□ -2.71
SHOX2O60902 Y_RNA.422-201ENST00000384054 114 ntBASIC-1.9□□□□□ -2.71
SHOX2O60902 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.91□□□□□ -2.72
SHOX2O60902 SNORD60-201ENST00000383903 83 ntBASIC-1.91□□□□□ -2.72
SHOX2O60902 RNY4P13-201ENST00000384284 96 ntBASIC-1.91□□□□□ -2.72
SHOX2O60902 MIR548V-201ENST00000584165 80 ntBASIC-1.91□□□□□ -2.72
SHOX2O60902 U7.2-201ENST00000607576 63 ntBASIC-1.91□□□□□ -2.72
SHOX2O60902 RNU6-247P-201ENST00000362636 107 ntBASIC-1.92□□□□□ -2.72
SHOX2O60902 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.92□□□□□ -2.72
SHOX2O60902 Y_RNA.63-201ENST00000362841 102 ntBASIC-1.92□□□□□ -2.72
SHOX2O60902 Y_RNA.668-201ENST00000516233 93 ntBASIC-1.92□□□□□ -2.72
SHOX2O60902 RNU6-530P-201ENST00000391180 107 ntBASIC-1.93□□□□□ -2.72
SHOX2O60902 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.93□□□□□ -2.72
SHOX2O60902 AL117187.1-201ENST00000555482 181 ntBASIC-1.93□□□□□ -2.72
SHOX2O60902 SNORD1B-201ENST00000363091 84 ntBASIC-1.94□□□□□ -2.72
SHOX2O60902 SNORD63.2-201ENST00000516303 64 ntBASIC-1.94□□□□□ -2.72
SHOX2O60902 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.94□□□□□ -2.72
SHOX2O60902 AL359920.1-201ENST00000618332 176 ntBASIC-1.94□□□□□ -2.72
SHOX2O60902 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 RNU6-681P-201ENST00000364012 104 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 RNU6-106P-201ENST00000384405 107 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 MIR548AJ2-201ENST00000408539 92 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 Y_RNA.612-201ENST00000410717 95 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 RNU7-151P-201ENST00000516930 53 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 MIR4796-201ENST00000580742 81 ntBASIC-1.95□□□□□ -2.72
SHOX2O60902 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 SNORD113-2-201ENST00000391082 72 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 SNORA17.4-201ENST00000391287 132 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 RNU6-795P-201ENST00000516323 103 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 MIR5009-201ENST00000578736 100 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 AC044792.1-201ENST00000593294 196 ntBASIC-1.96□□□□□ -2.72
SHOX2O60902 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.97□□□□□ -2.72
SHOX2O60902 RNU6-912P-201ENST00000363800 104 ntBASIC-1.97□□□□□ -2.72
SHOX2O60902 SNORD58A-201ENST00000383875 65 ntBASIC-1.97□□□□□ -2.72
SHOX2O60902 RNU6-974P-201ENST00000384099 108 ntBASIC-1.97□□□□□ -2.72
SHOX2O60902 RNU6-520P-201ENST00000384717 104 ntBASIC-1.98□□□□□ -2.73
SHOX2O60902 SNORA41B-201ENST00000384785 128 ntBASIC-1.98□□□□□ -2.73
SHOX2O60902 RNU7-160P-201ENST00000516660 62 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 178.1 ms