Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNU6-176P-201ENST00000517196 105 ntBASIC1.37□□□□□ -2.19
GFRA3O60609 SNORA62.4-201ENST00000365504 151 ntBASIC1.36□□□□□ -2.19
GFRA3O60609 SNORA2A-201ENST00000383885 135 ntBASIC1.36□□□□□ -2.19
GFRA3O60609 MIR501-201ENST00000390204 84 ntBASIC1.36□□□□□ -2.19
GFRA3O60609 SNORD99-201ENST00000408612 74 ntBASIC1.36□□□□□ -2.19
GFRA3O60609 AC084368.1-201ENST00000620935 65 ntBASIC1.36□□□□□ -2.19
GFRA3O60609 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
GFRA3O60609 MIR548Q-201ENST00000408404 100 ntBASIC1.35□□□□□ -2.19
GFRA3O60609 RNU6-229P-201ENST00000516614 102 ntBASIC1.35□□□□□ -2.19
GFRA3O60609 RNA5SP257-201ENST00000363023 116 ntBASIC1.34□□□□□ -2.19
GFRA3O60609 Y_RNA.134-201ENST00000363435 105 ntBASIC1.34□□□□□ -2.19
GFRA3O60609 RNA5SP517-201ENST00000364724 117 ntBASIC1.34□□□□□ -2.19
GFRA3O60609 RNA5SP169-201ENST00000517268 117 ntBASIC1.34□□□□□ -2.19
GFRA3O60609 Y_RNA.382-201ENST00000365672 114 ntBASIC1.33□□□□□ -2.2
GFRA3O60609 RNA5SP255-201ENST00000516370 107 ntBASIC1.33□□□□□ -2.2
GFRA3O60609 RNA5SP67-201ENST00000516422 131 ntBASIC1.33□□□□□ -2.2
GFRA3O60609 MIR106A-201ENST00000384870 81 ntBASIC1.32□□□□□ -2.2
GFRA3O60609 MIR876-201ENST00000401147 81 ntBASIC1.31□□□□□ -2.2
GFRA3O60609 MIR3925-201ENST00000584674 77 ntBASIC1.31□□□□□ -2.2
GFRA3O60609 MIR3660-201ENST00000584845 100 ntBASIC1.31□□□□□ -2.2
GFRA3O60609 uc_338.36-201ENST00000622331 158 ntBASIC1.31□□□□□ -2.2
GFRA3O60609 AL391099.1-201ENST00000624635 187 ntBASIC1.31□□□□□ -2.2
GFRA3O60609 RNU7-55P-201ENST00000459426 62 ntBASIC1.29□□□□□ -2.2
GFRA3O60609 RNA5SP121-201ENST00000516537 101 ntBASIC1.29□□□□□ -2.2
GFRA3O60609 AP002795.1-201ENST00000534879 84 ntBASIC1.29□□□□□ -2.2
GFRA3O60609 MIR924-201ENST00000638017 53 ntBASIC1.29□□□□□ -2.2
GFRA3O60609 Y_RNA.423-201ENST00000384057 113 ntBASIC1.28□□□□□ -2.2
GFRA3O60609 RNA5SP330-201ENST00000517096 96 ntBASIC1.28□□□□□ -2.2
GFRA3O60609 SNORA25.18-201ENST00000607153 114 ntBASIC1.28□□□□□ -2.2
GFRA3O60609 RNU6-1233P-201ENST00000362922 102 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 SNORA42.1-201ENST00000363515 137 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 SNORD118-201ENST00000363593 134 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 SNORD115.2-201ENST00000391126 59 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 AC087343.1-201ENST00000477341 475 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 MIR6755-201ENST00000619993 66 ntBASIC1.27□□□□□ -2.21
GFRA3O60609 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
GFRA3O60609 RNU6-608P-201ENST00000383927 104 ntBASIC1.26□□□□□ -2.21
GFRA3O60609 MIR643-201ENST00000385267 97 ntBASIC1.26□□□□□ -2.21
GFRA3O60609 RNA5SP222-201ENST00000411039 105 ntBASIC1.26□□□□□ -2.21
GFRA3O60609 RNU6-973P-201ENST00000364690 107 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 MIR548N-201ENST00000408742 75 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 AC096531.1-201ENST00000419107 107 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 ACA64.5-201ENST00000516207 127 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 AC211469.2-201ENST00000605461 205 ntBASIC1.25□□□□□ -2.21
GFRA3O60609 MIR320A-201ENST00000385302 82 ntBASIC1.24□□□□□ -2.21
GFRA3O60609 RNU6-1133P-201ENST00000410963 100 ntBASIC1.24□□□□□ -2.21
GFRA3O60609 MIR8068-201ENST00000618032 68 ntBASIC1.24□□□□□ -2.21
GFRA3O60609 SNORD114-24-201ENST00000365029 72 ntBASIC1.23□□□□□ -2.21
GFRA3O60609 MIR518A1-201ENST00000385068 85 ntBASIC1.23□□□□□ -2.21
GFRA3O60609 SNORD60-201ENST00000383903 83 ntBASIC1.22□□□□□ -2.21
GFRA3O60609 RNU6-68P-201ENST00000516576 104 ntBASIC1.22□□□□□ -2.21
GFRA3O60609 CYP3A137P-201ENST00000562436 69 ntBASIC1.22□□□□□ -2.21
GFRA3O60609 RNU6-997P-201ENST00000384725 107 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 RNU6-848P-201ENST00000515948 107 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 RNU6-617P-201ENST00000516147 107 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 RNU6-473P-201ENST00000516164 107 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 RNU6-1049P-201ENST00000516414 107 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 MIR5704-201ENST00000584029 77 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 MIR6086-201ENST00000638065 55 ntBASIC1.21□□□□□ -2.22
GFRA3O60609 MIR124-2-201ENST00000385081 109 ntBASIC1.2□□□□□ -2.22
GFRA3O60609 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
GFRA3O60609 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.2□□□□□ -2.22
GFRA3O60609 MIR581-201ENST00000384895 96 ntBASIC1.19□□□□□ -2.22
GFRA3O60609 RNA5SP98-201ENST00000363158 137 ntBASIC1.18□□□□□ -2.22
GFRA3O60609 Y_RNA.320-201ENST00000365144 102 ntBASIC1.18□□□□□ -2.22
GFRA3O60609 RNU4-54P-201ENST00000516428 129 ntBASIC1.18□□□□□ -2.22
GFRA3O60609 MIR8087-201ENST00000612745 78 ntBASIC1.18□□□□□ -2.22
GFRA3O60609 AC010487.4-201ENST00000637027 61 ntBASIC1.18□□□□□ -2.22
GFRA3O60609 RNU6-836P-201ENST00000362920 107 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 SNORD114-23-201ENST00000363536 72 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 MIR760-201ENST00000390220 80 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 SNORA40.8-201ENST00000411034 126 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 SCARNA11.2-201ENST00000517183 154 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 MIR499B-201ENST00000636498 73 ntBASIC1.17□□□□□ -2.22
GFRA3O60609 MIR373-201ENST00000362273 69 ntBASIC1.16□□□□□ -2.22
GFRA3O60609 RNU6-900P-201ENST00000384498 102 ntBASIC1.16□□□□□ -2.22
GFRA3O60609 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.16□□□□□ -2.22
GFRA3O60609 AL627230.5-201ENST00000619807 58 ntBASIC1.16□□□□□ -2.22
GFRA3O60609 MIR140-201ENST00000385282 100 ntBASIC1.15□□□□□ -2.23
GFRA3O60609 AL353765.1-201ENST00000605514 183 ntBASIC1.15□□□□□ -2.23
GFRA3O60609 SMAD5-AS1_3.1-201ENST00000614187 124 ntBASIC1.15□□□□□ -2.23
GFRA3O60609 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
GFRA3O60609 RNA5SP128-201ENST00000365305 116 ntBASIC1.14□□□□□ -2.23
GFRA3O60609 SNORA36.2-201ENST00000384004 127 ntBASIC1.14□□□□□ -2.23
GFRA3O60609 MIR6854-201ENST00000614935 69 ntBASIC1.13□□□□□ -2.23
GFRA3O60609 MIR5683-201ENST00000636514 76 ntBASIC1.13□□□□□ -2.23
GFRA3O60609 RNA5SP224-201ENST00000365069 126 ntBASIC1.12□□□□□ -2.23
GFRA3O60609 Y_RNA.406-201ENST00000383984 100 ntBASIC1.12□□□□□ -2.23
GFRA3O60609 SNORD26-201ENST00000384147 75 ntBASIC1.12□□□□□ -2.23
GFRA3O60609 RNU6-955P-201ENST00000410497 104 ntBASIC1.12□□□□□ -2.23
GFRA3O60609 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
GFRA3O60609 AC114755.3-201ENST00000481111 251 ntBASIC1.11□□□□□ -2.23
GFRA3O60609 AC013734.1-201ENST00000619329 111 ntBASIC1.11□□□□□ -2.23
GFRA3O60609 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.1□□□□□ -2.23
GFRA3O60609 Y_RNA.129-201ENST00000363392 110 ntBASIC1.1□□□□□ -2.23
GFRA3O60609 MIR6513-201ENST00000621188 64 ntBASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 213.3 ms