Protein–RNA interactions for Protein: A0A0J9YXS1

NPHP3-ACAD11, NPHP3-ACAD11 readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11A0A0J9YXS1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.07□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 RNA5SP192-201ENST00000364404 120 ntBASIC0.06□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 MIR193B-201ENST00000384907 83 ntBASIC0.06□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 MIR4290-201ENST00000583807 95 ntBASIC0.06□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 MIR655-201ENST00000362159 97 ntBASIC0.04□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 AC096531.1-201ENST00000419107 107 ntBASIC0.04□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 MIR4667-201ENST00000578933 66 ntBASIC0.04□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 AC023932.2-201ENST00000603176 175 ntBASIC0.04□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.282-201ENST00000364793 102 ntBASIC0.03□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 RNU6-669P-201ENST00000365575 107 ntBASIC0.03□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 RNU6-46P-201ENST00000383860 107 ntBASIC0.03□□□□□ -2.4
NPHP3-ACAD11A0A0J9YXS1 SNORD60.1-201ENST00000362451 73 ntBASIC0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 SNORA41B-201ENST00000384785 128 ntBASIC0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR527-201ENST00000385244 85 ntBASIC0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR1273G-201ENST00000577677 100 ntBASIC0.01□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 RNU6-940P-201ENST00000363433 104 ntBASIC0□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 SNORD49B-201ENST00000365172 72 ntBASIC0□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 RNU6-901P-201ENST00000384593 106 ntBASIC0□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 SNORD56B-201ENST00000384713 71 ntBASIC0□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR1197-201ENST00000408818 88 ntBASIC-0.01□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 RNU6-122P-201ENST00000516818 107 ntBASIC-0.01□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR5704-201ENST00000584029 77 ntBASIC-0.01□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR330-201ENST00000362196 94 ntBASIC-0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 SNORA62.4-201ENST00000365504 151 ntBASIC-0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 AC104692.1-201ENST00000472406 90 ntBASIC-0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR4464-201ENST00000580818 92 ntBASIC-0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 MIR4768-201ENST00000585270 74 ntBASIC-0.02□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 SNORD116-16-201ENST00000384533 92 ntBASIC-0.03□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 AC108676.2-201ENST00000605225 163 ntBASIC-0.03□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.03□□□□□ -2.41
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.04□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 RNA5SP480-201ENST00000516840 109 ntBASIC-0.04□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR466-201ENST00000580653 84 ntBASIC-0.04□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR6888-201ENST00000621977 67 ntBASIC-0.04□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 RNA5SP330-201ENST00000517096 96 ntBASIC-0.05□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR8087-201ENST00000612745 78 ntBASIC-0.05□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 AL445584.3-201ENST00000617173 78 ntBASIC-0.05□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR8068-201ENST00000618032 68 ntBASIC-0.05□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 RNU6-458P-201ENST00000384179 107 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 AL445193.1-201ENST00000441183 141 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 U6.58-201ENST00000613107 107 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR6854-201ENST00000614935 69 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR2909-201ENST00000617113 69 ntBASIC-0.06□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.08□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 RNA5SP63-201ENST00000391225 112 ntBASIC-0.08□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR5190-201ENST00000581537 80 ntBASIC-0.08□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR4280-201ENST00000582178 76 ntBASIC-0.08□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR429-201ENST00000362106 83 ntBASIC-0.09□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.09□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.09□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 MIR1295B-201ENST00000636144 60 ntBASIC-0.09□□□□□ -2.42
NPHP3-ACAD11A0A0J9YXS1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 RNU6-246P-201ENST00000384702 107 ntBASIC-0.1□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 AC114755.3-201ENST00000481111 251 ntBASIC-0.1□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 AL590491.3-201ENST00000610731 82 ntBASIC-0.11□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 MIR3938-201ENST00000582157 103 ntBASIC-0.12□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 MIR6779-201ENST00000617283 64 ntBASIC-0.12□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.13□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 MIR4263-201ENST00000584745 83 ntBASIC-0.13□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.14□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 SNORD4A-201ENST00000459174 72 ntBASIC-0.15□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.15□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 MIR6851-201ENST00000617060 67 ntBASIC-0.15□□□□□ -2.43
NPHP3-ACAD11A0A0J9YXS1 SNORD1B-201ENST00000363091 84 ntBASIC-0.16□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 MIR124-2-201ENST00000385081 109 ntBASIC-0.16□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 MIR3666-201ENST00000607845 111 ntBASIC-0.16□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 MIR633-201ENST00000384821 98 ntBASIC-0.17□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU6-924P-201ENST00000362926 108 ntBASIC-0.18□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 U7.5-201ENST00000517224 61 ntBASIC-0.18□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU6-598P-201ENST00000364017 105 ntBASIC-0.19□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.19□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU6-499P-201ENST00000365615 107 ntBASIC-0.19□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU7-88P-201ENST00000458752 63 ntBASIC-0.19□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 AC093726.3-201ENST00000637588 150 ntBASIC-0.19□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.2□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU6-231P-201ENST00000517122 103 ntBASIC-0.2□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.21□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.21□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 MIR4788-201ENST00000639104 80 ntBASIC-0.21□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.22□□□□□ -2.44
NPHP3-ACAD11A0A0J9YXS1 RNU6-696P-201ENST00000390834 107 ntBASIC-0.23□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-172P-201ENST00000411000 93 ntBASIC-0.23□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.23□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 U2.18-201ENST00000622185 84 ntBASIC-0.23□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-446P-201ENST00000362827 106 ntBASIC-0.24□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-829P-201ENST00000363700 112 ntBASIC-0.24□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.24□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 MIR7110-201ENST00000612638 86 ntBASIC-0.24□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 AC079150.2-201ENST00000443733 78 ntBASIC-0.25□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU7-119P-201ENST00000459279 63 ntBASIC-0.25□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.26□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 RNU6-520P-201ENST00000384717 104 ntBASIC-0.26□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 MIR518B-201ENST00000385127 83 ntBASIC-0.27□□□□□ -2.45
NPHP3-ACAD11A0A0J9YXS1 SNORD116.2-201ENST00000391251 93 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 195.9 ms