Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-315P-201ENST00000362666 107 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 RNU6-337P-201ENST00000391243 106 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 AL445193.1-201ENST00000441183 141 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 RNU6-807P-201ENST00000516805 107 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 MIR5704-201ENST00000584029 77 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 MIR8068-201ENST00000618032 68 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 AC090617.8-201ENST00000623339 167 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 MIR1297-201ENST00000637311 77 ntBASIC-0.31□□□□□ -2.46
CDK11AQ9UQ88 RNU6-478P-201ENST00000363904 110 ntBASIC-0.32□□□□□ -2.46
CDK11AQ9UQ88 MIR196A2-201ENST00000385189 110 ntBASIC-0.32□□□□□ -2.46
CDK11AQ9UQ88 MIR214-201ENST00000385214 110 ntBASIC-0.32□□□□□ -2.46
CDK11AQ9UQ88 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
CDK11AQ9UQ88 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 RNU6-900P-201ENST00000384498 102 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 RNU7-55P-201ENST00000459426 62 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 RNA5SP147-201ENST00000516493 109 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 SNORD38.3-201ENST00000516599 73 ntBASIC-0.33□□□□□ -2.46
CDK11AQ9UQ88 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 MIR1265-201ENST00000408444 86 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 MIR4436A-201ENST00000585278 85 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 U6.96-201ENST00000636425 70 ntBASIC-0.34□□□□□ -2.46
CDK11AQ9UQ88 SNORD114-31-201ENST00000363219 75 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 SNORD126-201ENST00000459475 77 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 AC114755.3-201ENST00000481111 251 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 RNA5SP66-201ENST00000517178 101 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 MIR6773-201ENST00000612812 74 ntBASIC-0.36□□□□□ -2.47
CDK11AQ9UQ88 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.37□□□□□ -2.47
CDK11AQ9UQ88 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
CDK11AQ9UQ88 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.37□□□□□ -2.47
CDK11AQ9UQ88 AC096531.1-201ENST00000419107 107 ntBASIC-0.37□□□□□ -2.47
CDK11AQ9UQ88 MIR3675-201ENST00000583661 73 ntBASIC-0.37□□□□□ -2.47
CDK11AQ9UQ88 AC074348.1-201ENST00000426503 132 ntBASIC-0.38□□□□□ -2.47
CDK11AQ9UQ88 MIR1245B-201ENST00000636115 69 ntBASIC-0.38□□□□□ -2.47
CDK11AQ9UQ88 MIRLET7B-201ENST00000385140 83 ntBASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 RNU6-284P-201ENST00000411105 106 ntBASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 MIR4645-201ENST00000583158 77 ntBASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 AC062037.1-201ENST00000605302 128 ntBASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 MIR6851-201ENST00000617060 67 ntBASIC-0.39□□□□□ -2.47
CDK11AQ9UQ88 SNORD73B-201ENST00000364394 72 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 SNORD115-23-201ENST00000364461 82 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 SNORD14C-201ENST00000365382 88 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 RNU6-901P-201ENST00000384593 106 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 RNU6-721P-201ENST00000410155 105 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 AL391099.1-201ENST00000624635 187 ntBASIC-0.4□□□□□ -2.47
CDK11AQ9UQ88 RNU6-973P-201ENST00000364690 107 ntBASIC-0.41□□□□□ -2.48
CDK11AQ9UQ88 SNORA33.1-201ENST00000364957 130 ntBASIC-0.41□□□□□ -2.48
CDK11AQ9UQ88 Z95118.1-201ENST00000421372 247 ntBASIC-0.41□□□□□ -2.48
CDK11AQ9UQ88 MIR4666B-201ENST00000578142 81 ntBASIC-0.41□□□□□ -2.48
CDK11AQ9UQ88 AC093726.3-201ENST00000637588 150 ntBASIC-0.41□□□□□ -2.48
CDK11AQ9UQ88 SNORA8.1-201ENST00000384250 140 ntBASIC-0.42□□□□□ -2.48
CDK11AQ9UQ88 MIR521-2-201ENST00000384818 87 ntBASIC-0.42□□□□□ -2.48
CDK11AQ9UQ88 MIR4464-201ENST00000580818 92 ntBASIC-0.42□□□□□ -2.48
CDK11AQ9UQ88 MIR6739-201ENST00000622461 75 ntBASIC-0.42□□□□□ -2.48
CDK11AQ9UQ88 snoR1.1-201ENST00000628177 80 ntBASIC-0.42□□□□□ -2.48
CDK11AQ9UQ88 SNORA3B-201ENST00000391305 131 ntBASIC-0.43□□□□□ -2.48
CDK11AQ9UQ88 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.44□□□□□ -2.48
CDK11AQ9UQ88 SNORD22.1-201ENST00000516331 125 ntBASIC-0.44□□□□□ -2.48
CDK11AQ9UQ88 MIR6854-201ENST00000614935 69 ntBASIC-0.44□□□□□ -2.48
CDK11AQ9UQ88 SNORD114-28-201ENST00000363610 72 ntBASIC-0.45□□□□□ -2.48
CDK11AQ9UQ88 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.45□□□□□ -2.48
CDK11AQ9UQ88 SNORA26.2-201ENST00000390922 122 ntBASIC-0.45□□□□□ -2.48
CDK11AQ9UQ88 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.46□□□□□ -2.48
CDK11AQ9UQ88 RPS29P8-201ENST00000445109 171 ntBASIC-0.46□□□□□ -2.48
CDK11AQ9UQ88 MIR4712-201ENST00000583750 82 ntBASIC-0.46□□□□□ -2.48
CDK11AQ9UQ88 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
CDK11AQ9UQ88 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.47□□□□□ -2.48
CDK11AQ9UQ88 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.47□□□□□ -2.48
CDK11AQ9UQ88 MIR548AG1-201ENST00000579932 66 ntBASIC-0.47□□□□□ -2.48
CDK11AQ9UQ88 AP001180.6-201ENST00000584918 159 ntBASIC-0.47□□□□□ -2.48
CDK11AQ9UQ88 MIR6888-201ENST00000621977 67 ntBASIC-0.47□□□□□ -2.48
CDK11AQ9UQ88 RNU6-330P-201ENST00000363015 107 ntBASIC-0.48□□□□□ -2.49
CDK11AQ9UQ88 MIR204-201ENST00000385200 110 ntBASIC-0.48□□□□□ -2.49
CDK11AQ9UQ88 MIR4484-201ENST00000582855 83 ntBASIC-0.48□□□□□ -2.49
CDK11AQ9UQ88 MIR8064-201ENST00000612863 90 ntBASIC-0.48□□□□□ -2.49
CDK11AQ9UQ88 SNORD114-14-201ENST00000362723 75 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR124-2-201ENST00000385081 109 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR1255B2-201ENST00000408618 67 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 RNA5SP25-201ENST00000410815 110 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 CYP3A54P-201ENST00000566950 75 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR3179-1-201ENST00000578940 84 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR3179-2-201ENST00000579107 84 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR3179-3-201ENST00000579566 84 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR4493-201ENST00000584016 73 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 AL353803.5-201ENST00000599815 141 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 MIR3179-4-201ENST00000617599 84 ntBASIC-0.49□□□□□ -2.49
CDK11AQ9UQ88 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 MIR517B-201ENST00000385102 67 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 MIR518B-201ENST00000385127 83 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 MIR1302-4-201ENST00000408701 150 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 RNY4P29-201ENST00000410801 97 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 AP000533.3-201ENST00000447704 118 ntBASIC-0.5□□□□□ -2.49
CDK11AQ9UQ88 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.51□□□□□ -2.49
CDK11AQ9UQ88 AL445584.3-201ENST00000617173 78 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 9.1 ms