Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNU7-188P-201ENST00000517063 64 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 AC243829.6-201ENST00000612652 106 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 MIR6086-201ENST00000638065 55 ntBASIC1.05□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-987P-201ENST00000384759 104 ntBASIC1.04□□□□□ -2.24
ZC3H4Q9UPT8 RNU7-129P-201ENST00000516128 62 ntBASIC1.04□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-614P-201ENST00000384369 107 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 RNU6-1232P-201ENST00000516299 86 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 CYP3A54P-201ENST00000566950 75 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 U6.59-201ENST00000615686 107 ntBASIC1.03□□□□□ -2.24
ZC3H4Q9UPT8 MIR760-201ENST00000390220 80 ntBASIC1.02□□□□□ -2.25
ZC3H4Q9UPT8 MIR4711-201ENST00000578274 70 ntBASIC1.02□□□□□ -2.25
ZC3H4Q9UPT8 SNORD60.1-201ENST00000362451 73 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 RNU4-37P-201ENST00000410214 84 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-122P-201ENST00000516818 107 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 U4.4-201ENST00000620626 117 ntBASIC1.01□□□□□ -2.25
ZC3H4Q9UPT8 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 MIR1197-201ENST00000408818 88 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 RNA5SP193-201ENST00000410353 107 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-518P-201ENST00000516056 96 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 AC084368.1-201ENST00000620935 65 ntBASIC0.99□□□□□ -2.25
ZC3H4Q9UPT8 SNORA9.1-201ENST00000362412 131 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 Y_RNA.246-201ENST00000364495 108 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 MIR6755-201ENST00000619993 66 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 AC090617.8-201ENST00000623339 167 ntBASIC0.98□□□□□ -2.25
ZC3H4Q9UPT8 RNU6-829P-201ENST00000363700 112 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR501-201ENST00000390204 84 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 SNORD2-201ENST00000459163 69 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR4677-201ENST00000584153 80 ntBASIC0.97□□□□□ -2.25
ZC3H4Q9UPT8 MIR1255B2-201ENST00000408618 67 ntBASIC0.96□□□□□ -2.26
ZC3H4Q9UPT8 MIR6835-201ENST00000621552 64 ntBASIC0.96□□□□□ -2.26
ZC3H4Q9UPT8 AL021921.1-201ENST00000442774 93 ntBASIC0.95□□□□□ -2.26
ZC3H4Q9UPT8 MIR3938-201ENST00000582157 103 ntBASIC0.95□□□□□ -2.26
ZC3H4Q9UPT8 RNA5SP347-201ENST00000362445 119 ntBASIC0.94□□□□□ -2.26
ZC3H4Q9UPT8 MIR508-201ENST00000384857 115 ntBASIC0.94□□□□□ -2.26
ZC3H4Q9UPT8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-1036P-201ENST00000383959 104 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-1246P-201ENST00000391064 107 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 MIR2909-201ENST00000617113 69 ntBASIC0.93□□□□□ -2.26
ZC3H4Q9UPT8 Y_RNA.325-201ENST00000365171 122 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-945P-201ENST00000383947 107 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
ZC3H4Q9UPT8 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
ZC3H4Q9UPT8 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
ZC3H4Q9UPT8 RNA5SP128-201ENST00000365305 116 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 MIR6773-201ENST00000612812 74 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 AC243829.3-201ENST00000622177 108 ntBASIC0.9□□□□□ -2.26
ZC3H4Q9UPT8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-175P-201ENST00000516896 107 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 Y_RNA.236-201ENST00000364427 111 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 SNORA49-201ENST00000386157 136 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR548AD-201ENST00000584780 82 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR6866-201ENST00000638146 69 ntBASIC0.89□□□□□ -2.27
ZC3H4Q9UPT8 MIR519A2-201ENST00000384990 87 ntBASIC0.87□□□□□ -2.27
ZC3H4Q9UPT8 MIR527-201ENST00000385244 85 ntBASIC0.87□□□□□ -2.27
ZC3H4Q9UPT8 SNORA41B-201ENST00000384785 128 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-337P-201ENST00000391243 106 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-848P-201ENST00000515948 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-617P-201ENST00000516147 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-473P-201ENST00000516164 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-1049P-201ENST00000516414 107 ntBASIC0.86□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-141P-201ENST00000410499 105 ntBASIC0.85□□□□□ -2.27
ZC3H4Q9UPT8 RNU6-446P-201ENST00000362827 106 ntBASIC0.84□□□□□ -2.28
ZC3H4Q9UPT8 RN7SL660P-201ENST00000614852 299 ntBASIC0.84□□□□□ -2.28
ZC3H4Q9UPT8 SNORD115-25-201ENST00000362619 82 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-30P-201ENST00000384561 107 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-782P-201ENST00000516852 104 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 MIR3925-201ENST00000584674 77 ntBASIC0.83□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-863P-201ENST00000515989 104 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 SCARNA11.2-201ENST00000517183 154 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 AP000676.1-201ENST00000533307 52 ntBASIC0.82□□□□□ -2.28
ZC3H4Q9UPT8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 SNORD44.1-201ENST00000363202 61 ntBASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 MIRLET7B-201ENST00000385140 83 ntBASIC0.81□□□□□ -2.28
ZC3H4Q9UPT8 Y_RNA.74-201ENST00000362911 99 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 SNORA68.3-201ENST00000515906 83 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 RNA5SP285-201ENST00000516619 119 ntBASIC0.8□□□□□ -2.28
ZC3H4Q9UPT8 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNU6-502P-201ENST00000362419 108 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNA5SP499-201ENST00000363982 119 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 RNU7-154P-201ENST00000516194 62 ntBASIC0.78□□□□□ -2.28
ZC3H4Q9UPT8 MIR876-201ENST00000401147 81 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNA5SP470-201ENST00000516463 106 ntBASIC0.77□□□□□ -2.29
ZC3H4Q9UPT8 RNU6-1312P-201ENST00000362425 108 ntBASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
ZC3H4Q9UPT8 Y_RNA.282-201ENST00000364793 102 ntBASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 SNORD116-16-201ENST00000384533 92 ntBASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.75□□□□□ -2.29
ZC3H4Q9UPT8 RNU7-119P-201ENST00000459279 63 ntBASIC0.74□□□□□ -2.29
ZC3H4Q9UPT8 SNORD113-4-201ENST00000364802 75 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 RNA5SP331-201ENST00000364986 107 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 RNU6-520P-201ENST00000384717 104 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 SNORD116.2-201ENST00000391251 93 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 snoR1.1-201ENST00000628177 80 ntBASIC0.73□□□□□ -2.29
ZC3H4Q9UPT8 MIR643-201ENST00000385267 97 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 199.4 ms