Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
VPS11Q9H270 MIR489-201ENST00000384923 84 ntBASIC0.72□□□□□ -2.29
VPS11Q9H270 MIRLET7B-201ENST00000385140 83 ntBASIC0.72□□□□□ -2.29
VPS11Q9H270 MIR527-201ENST00000385244 85 ntBASIC0.72□□□□□ -2.29
VPS11Q9H270 MIR4677-201ENST00000584153 80 ntBASIC0.72□□□□□ -2.29
VPS11Q9H270 MIR151B-201ENST00000584249 96 ntBASIC0.72□□□□□ -2.29
VPS11Q9H270 RNU6-502P-201ENST00000362419 108 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 Y_RNA.109-201ENST00000363215 102 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 Y_RNA.423-201ENST00000384057 113 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 MIR548J-201ENST00000408833 112 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 RNU7-154P-201ENST00000516194 62 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 MIR6788-201ENST00000618842 66 ntBASIC0.71□□□□□ -2.3
VPS11Q9H270 SNORD114-29-201ENST00000364819 70 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 SNORA2A-201ENST00000383885 135 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 SNORA40.8-201ENST00000411034 126 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 MIR7110-201ENST00000612638 86 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 RN7SL660P-201ENST00000614852 299 ntBASIC0.7□□□□□ -2.3
VPS11Q9H270 RNU6-810P-201ENST00000364001 107 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6-1036P-201ENST00000383959 104 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6-246P-201ENST00000384702 107 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6-172P-201ENST00000411000 93 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6-229P-201ENST00000516614 102 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 RNU6-1223P-201ENST00000517124 104 ntBASIC0.69□□□□□ -2.3
VPS11Q9H270 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
VPS11Q9H270 SNORA40B-201ENST00000385573 128 ntBASIC0.68□□□□□ -2.3
VPS11Q9H270 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
VPS11Q9H270 MIR3925-201ENST00000584674 77 ntBASIC0.68□□□□□ -2.3
VPS11Q9H270 RNU4-33P-201ENST00000364316 85 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 RNU6-782P-201ENST00000516852 104 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 MIR4490-201ENST00000582647 84 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 MIR6515-201ENST00000619843 57 ntBASIC0.67□□□□□ -2.3
VPS11Q9H270 RNU6-945P-201ENST00000383947 107 ntBASIC0.66□□□□□ -2.3
VPS11Q9H270 RNU6-458P-201ENST00000384179 107 ntBASIC0.66□□□□□ -2.3
VPS11Q9H270 U6.58-201ENST00000613107 107 ntBASIC0.66□□□□□ -2.3
VPS11Q9H270 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
VPS11Q9H270 MIR760-201ENST00000390220 80 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 AC098934.3-201ENST00000430450 190 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 SNORD2-201ENST00000459163 69 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 MIR548X-201ENST00000580069 75 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 U7.6-201ENST00000610841 64 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 AC022709.1-201ENST00000615967 87 ntBASIC0.65□□□□□ -2.31
VPS11Q9H270 SNORD115-23-201ENST00000364461 82 ntBASIC0.64□□□□□ -2.31
VPS11Q9H270 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.64□□□□□ -2.31
VPS11Q9H270 MIR876-201ENST00000401147 81 ntBASIC0.64□□□□□ -2.31
VPS11Q9H270 MIR548F3-201ENST00000408509 87 ntBASIC0.64□□□□□ -2.31
VPS11Q9H270 RNA5SP470-201ENST00000516463 106 ntBASIC0.64□□□□□ -2.31
VPS11Q9H270 RNU6-598P-201ENST00000364017 105 ntBASIC0.63□□□□□ -2.31
VPS11Q9H270 Y_RNA.698-201ENST00000516798 118 ntBASIC0.63□□□□□ -2.31
VPS11Q9H270 AC084368.1-201ENST00000620935 65 ntBASIC0.63□□□□□ -2.31
VPS11Q9H270 MIR499B-201ENST00000636498 73 ntBASIC0.63□□□□□ -2.31
VPS11Q9H270 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
VPS11Q9H270 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
VPS11Q9H270 MIR5000-201ENST00000577717 103 ntBASIC0.62□□□□□ -2.31
VPS11Q9H270 AL353803.5-201ENST00000599815 141 ntBASIC0.62□□□□□ -2.31
VPS11Q9H270 U2.18-201ENST00000622185 84 ntBASIC0.62□□□□□ -2.31
VPS11Q9H270 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
VPS11Q9H270 RNA5SP128-201ENST00000365305 116 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 RNU6-930P-201ENST00000390938 100 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 SNORD71-201ENST00000411292 86 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 RNU6-848P-201ENST00000515948 107 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 RNU6-617P-201ENST00000516147 107 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 RNU6-473P-201ENST00000516164 107 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 RNU6-1049P-201ENST00000516414 107 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 MIR4714-201ENST00000580728 77 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.61□□□□□ -2.31
VPS11Q9H270 MIR598-201ENST00000384868 97 ntBASIC0.6□□□□□ -2.31
VPS11Q9H270 MIR579-201ENST00000385221 98 ntBASIC0.6□□□□□ -2.31
VPS11Q9H270 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
VPS11Q9H270 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.31
VPS11Q9H270 RNU6-924P-201ENST00000362926 108 ntBASIC0.59□□□□□ -2.31
VPS11Q9H270 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
VPS11Q9H270 SNORD44.1-201ENST00000363202 61 ntBASIC0.58□□□□□ -2.32
VPS11Q9H270 RNU6-863P-201ENST00000515989 104 ntBASIC0.58□□□□□ -2.32
VPS11Q9H270 RNU6-419P-201ENST00000517030 63 ntBASIC0.58□□□□□ -2.32
VPS11Q9H270 MIR4464-201ENST00000580818 92 ntBASIC0.58□□□□□ -2.32
VPS11Q9H270 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
VPS11Q9H270 MIR106A-201ENST00000384870 81 ntBASIC0.57□□□□□ -2.32
VPS11Q9H270 RNU7-129P-201ENST00000516128 62 ntBASIC0.57□□□□□ -2.32
VPS11Q9H270 RNU7-151P-201ENST00000516930 53 ntBASIC0.57□□□□□ -2.32
VPS11Q9H270 SCARNA11.2-201ENST00000517183 154 ntBASIC0.57□□□□□ -2.32
VPS11Q9H270 AP000676.1-201ENST00000533307 52 ntBASIC0.57□□□□□ -2.32
VPS11Q9H270 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
VPS11Q9H270 MIR429-201ENST00000362106 83 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 MIR103A1-201ENST00000362165 78 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 Y_RNA.69-201ENST00000362885 109 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 RNA5SP436-201ENST00000516020 115 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 RNU6-1262P-201ENST00000516217 96 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 RNA5SP480-201ENST00000516840 109 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 MIR4432-201ENST00000581823 84 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
VPS11Q9H270 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.54□□□□□ -2.32
VPS11Q9H270 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.54□□□□□ -2.32
VPS11Q9H270 SNORA68.3-201ENST00000515906 83 ntBASIC0.54□□□□□ -2.32
VPS11Q9H270 AC108676.2-201ENST00000605225 163 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms