Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 RNA5SP94-201ENST00000516917 108 ntBASIC1.46□□□□□ -2.18
TRIM47Q96LD4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM47Q96LD4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRIM47Q96LD4 Y_RNA.139-201ENST00000363464 102 ntBASIC1.45□□□□□ -2.18
TRIM47Q96LD4 SNORA25-201ENST00000384384 134 ntBASIC1.45□□□□□ -2.18
TRIM47Q96LD4 MIR548AA1-201ENST00000384971 97 ntBASIC1.45□□□□□ -2.18
TRIM47Q96LD4 RNU6-1262P-201ENST00000516217 96 ntBASIC1.44□□□□□ -2.18
TRIM47Q96LD4 MIR18A-201ENST00000362310 71 ntBASIC1.43□□□□□ -2.18
TRIM47Q96LD4 RNU6-1267P-201ENST00000410747 107 ntBASIC1.43□□□□□ -2.18
TRIM47Q96LD4 RNA5SP436-201ENST00000516020 115 ntBASIC1.43□□□□□ -2.18
TRIM47Q96LD4 RNU6-782P-201ENST00000516852 104 ntBASIC1.43□□□□□ -2.18
TRIM47Q96LD4 RNU6-894P-201ENST00000517094 105 ntBASIC1.43□□□□□ -2.18
TRIM47Q96LD4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.42□□□□□ -2.18
TRIM47Q96LD4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRIM47Q96LD4 SNORD114-29-201ENST00000364819 70 ntBASIC1.42□□□□□ -2.18
TRIM47Q96LD4 RNU6-59P-201ENST00000384787 107 ntBASIC1.42□□□□□ -2.18
TRIM47Q96LD4 SNORD45.2-201ENST00000363552 72 ntBASIC1.41□□□□□ -2.18
TRIM47Q96LD4 MIR29B1-201ENST00000385015 81 ntBASIC1.41□□□□□ -2.18
TRIM47Q96LD4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
TRIM47Q96LD4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.41□□□□□ -2.18
TRIM47Q96LD4 MIR26B-201ENST00000362251 77 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 RNA5SP327-201ENST00000362494 101 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 RNU6-974P-201ENST00000384099 108 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 AC087343.1-201ENST00000477341 475 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 MIR4295-201ENST00000585286 85 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 AL353803.5-201ENST00000599815 141 ntBASIC1.4□□□□□ -2.19
TRIM47Q96LD4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRIM47Q96LD4 RNU6-502P-201ENST00000362419 108 ntBASIC1.39□□□□□ -2.19
TRIM47Q96LD4 MIR548H4-201ENST00000408689 111 ntBASIC1.39□□□□□ -2.19
TRIM47Q96LD4 SNORD124-201ENST00000459577 104 ntBASIC1.39□□□□□ -2.19
TRIM47Q96LD4 RNU7-188P-201ENST00000517063 64 ntBASIC1.39□□□□□ -2.19
TRIM47Q96LD4 RNU1-29P-201ENST00000606574 126 ntBASIC1.39□□□□□ -2.19
TRIM47Q96LD4 MIR150-201ENST00000385048 84 ntBASIC1.38□□□□□ -2.19
TRIM47Q96LD4 AC011195.1-201ENST00000578177 177 ntBASIC1.38□□□□□ -2.19
TRIM47Q96LD4 Y_RNA.374-201ENST00000365606 101 ntBASIC1.37□□□□□ -2.19
TRIM47Q96LD4 MIR5706-201ENST00000579841 80 ntBASIC1.37□□□□□ -2.19
TRIM47Q96LD4 MIR4432-201ENST00000581823 84 ntBASIC1.37□□□□□ -2.19
TRIM47Q96LD4 MIR19B1-201ENST00000384829 87 ntBASIC1.36□□□□□ -2.19
TRIM47Q96LD4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.36□□□□□ -2.19
TRIM47Q96LD4 RNU6-175P-201ENST00000516896 107 ntBASIC1.36□□□□□ -2.19
TRIM47Q96LD4 AC108676.2-201ENST00000605225 163 ntBASIC1.36□□□□□ -2.19
TRIM47Q96LD4 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
TRIM47Q96LD4 RNU4-45P-201ENST00000365469 141 ntBASIC1.34□□□□□ -2.19
TRIM47Q96LD4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TRIM47Q96LD4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.34□□□□□ -2.19
TRIM47Q96LD4 SNORD57-201ENST00000448188 72 ntBASIC1.34□□□□□ -2.19
TRIM47Q96LD4 SNORD99-201ENST00000408612 74 ntBASIC1.33□□□□□ -2.2
TRIM47Q96LD4 RNU7-88P-201ENST00000458752 63 ntBASIC1.33□□□□□ -2.2
TRIM47Q96LD4 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 Y_RNA.698-201ENST00000516798 118 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 U7.5-201ENST00000517224 61 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 MIR5000-201ENST00000577717 103 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 RN7SL793P-201ENST00000583259 296 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 MTRNR2L9-201ENST00000622562 75 ntBASIC1.32□□□□□ -2.2
TRIM47Q96LD4 RNU6-530P-201ENST00000391180 107 ntBASIC1.31□□□□□ -2.2
TRIM47Q96LD4 AC069271.1-201ENST00000445577 156 ntBASIC1.31□□□□□ -2.2
TRIM47Q96LD4 SNORD63.2-201ENST00000516303 64 ntBASIC1.31□□□□□ -2.2
TRIM47Q96LD4 MIR373-201ENST00000362273 69 ntBASIC1.3□□□□□ -2.2
TRIM47Q96LD4 SNORD115-23-201ENST00000364461 82 ntBASIC1.29□□□□□ -2.2
TRIM47Q96LD4 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
TRIM47Q96LD4 SNORD63.1-201ENST00000516178 80 ntBASIC1.29□□□□□ -2.2
TRIM47Q96LD4 RNA5SP255-201ENST00000516370 107 ntBASIC1.29□□□□□ -2.2
TRIM47Q96LD4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
TRIM47Q96LD4 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
TRIM47Q96LD4 RNU6-1326P-201ENST00000391262 107 ntBASIC1.28□□□□□ -2.2
TRIM47Q96LD4 RNU6-1174P-201ENST00000517278 101 ntBASIC1.28□□□□□ -2.2
TRIM47Q96LD4 AC211469.2-201ENST00000605461 205 ntBASIC1.28□□□□□ -2.2
TRIM47Q96LD4 MIR216A-201ENST00000385063 110 ntBASIC1.27□□□□□ -2.21
TRIM47Q96LD4 RNA5SP222-201ENST00000411039 105 ntBASIC1.27□□□□□ -2.21
TRIM47Q96LD4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.27□□□□□ -2.21
TRIM47Q96LD4 U7.6-201ENST00000610841 64 ntBASIC1.27□□□□□ -2.21
TRIM47Q96LD4 Y_RNA.345-201ENST00000365384 92 ntBASIC1.26□□□□□ -2.21
TRIM47Q96LD4 MIR3170-201ENST00000582699 77 ntBASIC1.26□□□□□ -2.21
TRIM47Q96LD4 Y_RNA.206-201ENST00000364136 102 ntBASIC1.25□□□□□ -2.21
TRIM47Q96LD4 SNORD114-24-201ENST00000365029 72 ntBASIC1.25□□□□□ -2.21
TRIM47Q96LD4 RNU6-1232P-201ENST00000516299 86 ntBASIC1.25□□□□□ -2.21
TRIM47Q96LD4 RNU6-229P-201ENST00000516614 102 ntBASIC1.25□□□□□ -2.21
TRIM47Q96LD4 MIR4677-201ENST00000584153 80 ntBASIC1.25□□□□□ -2.21
TRIM47Q96LD4 RNA5SP517-201ENST00000364724 117 ntBASIC1.24□□□□□ -2.21
TRIM47Q96LD4 SNORA2A-201ENST00000383885 135 ntBASIC1.24□□□□□ -2.21
TRIM47Q96LD4 RNA5SP404-201ENST00000517118 132 ntBASIC1.23□□□□□ -2.21
TRIM47Q96LD4 SNORA25.18-201ENST00000607153 114 ntBASIC1.23□□□□□ -2.21
TRIM47Q96LD4 RN7SL660P-201ENST00000614852 299 ntBASIC1.23□□□□□ -2.21
TRIM47Q96LD4 AC084368.1-201ENST00000620935 65 ntBASIC1.23□□□□□ -2.21
TRIM47Q96LD4 Y_RNA.321-201ENST00000365149 102 ntBASIC1.22□□□□□ -2.21
TRIM47Q96LD4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.22□□□□□ -2.21
TRIM47Q96LD4 AP000676.1-201ENST00000533307 52 ntBASIC1.22□□□□□ -2.21
TRIM47Q96LD4 CYP3A137P-201ENST00000562436 69 ntBASIC1.22□□□□□ -2.21
TRIM47Q96LD4 MIR6888-201ENST00000621977 67 ntBASIC1.22□□□□□ -2.21
TRIM47Q96LD4 snoR1.1-201ENST00000628177 80 ntBASIC1.22□□□□□ -2.21
TRIM47Q96LD4 RNU1-124P-201ENST00000363861 145 ntBASIC1.21□□□□□ -2.22
TRIM47Q96LD4 Y_RNA.423-201ENST00000384057 113 ntBASIC1.21□□□□□ -2.22
TRIM47Q96LD4 MIR3973-201ENST00000579824 107 ntBASIC1.21□□□□□ -2.22
TRIM47Q96LD4 MIR4464-201ENST00000580818 92 ntBASIC1.21□□□□□ -2.22
TRIM47Q96LD4 MIR4317-201ENST00000637586 65 ntBASIC1.21□□□□□ -2.22
TRIM47Q96LD4 MIR501-201ENST00000390204 84 ntBASIC1.2□□□□□ -2.22
TRIM47Q96LD4 MIR6857-201ENST00000613267 93 ntBASIC1.2□□□□□ -2.22
TRIM47Q96LD4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.2□□□□□ -2.22
TRIM47Q96LD4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRIM47Q96LD4 RNU6-1111P-201ENST00000391118 107 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 355.2 ms