Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 SNORA41B-201ENST00000384785 128 ntBASIC0.6□□□□□ -2.31
IDH3AP50213 MIR520E-201ENST00000384867 87 ntBASIC0.6□□□□□ -2.31
IDH3AP50213 RNU6-127P-201ENST00000390897 107 ntBASIC0.6□□□□□ -2.31
IDH3AP50213 uc_338.17-201ENST00000619633 179 ntBASIC0.6□□□□□ -2.31
IDH3AP50213 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.6□□□□□ -2.31
IDH3AP50213 RNU6-614P-201ENST00000384369 107 ntBASIC0.59□□□□□ -2.31
IDH3AP50213 U6.59-201ENST00000615686 107 ntBASIC0.59□□□□□ -2.31
IDH3AP50213 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
IDH3AP50213 RNA5SP62-201ENST00000363457 110 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 RNU6-815P-201ENST00000384080 113 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 MIR216A-201ENST00000385063 110 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 RNU4-37P-201ENST00000410214 84 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 AP000676.1-201ENST00000533307 52 ntBASIC0.58□□□□□ -2.32
IDH3AP50213 Y_RNA.236-201ENST00000364427 111 ntBASIC0.57□□□□□ -2.32
IDH3AP50213 RNU6-446P-201ENST00000362827 106 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 RNA5SP98-201ENST00000363158 137 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 SNORD116-16-201ENST00000384533 92 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 MIR527-201ENST00000385244 85 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 AC108740.1-201ENST00000498629 225 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 MIR4452-201ENST00000583004 71 ntBASIC0.56□□□□□ -2.32
IDH3AP50213 Y_RNA.282-201ENST00000364793 102 ntBASIC0.55□□□□□ -2.32
IDH3AP50213 AC069113.3-201ENST00000521019 150 ntBASIC0.55□□□□□ -2.32
IDH3AP50213 CYP3A137P-201ENST00000562436 69 ntBASIC0.55□□□□□ -2.32
IDH3AP50213 MIR508-201ENST00000384857 115 ntBASIC0.54□□□□□ -2.32
IDH3AP50213 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.54□□□□□ -2.32
IDH3AP50213 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.54□□□□□ -2.32
IDH3AP50213 AC090625.1-201ENST00000357130 210 ntBASIC0.53□□□□□ -2.32
IDH3AP50213 MIR499A-201ENST00000384903 122 ntBASIC0.53□□□□□ -2.32
IDH3AP50213 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.53□□□□□ -2.32
IDH3AP50213 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
IDH3AP50213 MIR643-201ENST00000385267 97 ntBASIC0.52□□□□□ -2.33
IDH3AP50213 SNORD115-23-201ENST00000364461 82 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 RNU6-1327P-201ENST00000365302 105 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 RNU6-520P-201ENST00000384717 104 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
IDH3AP50213 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 MIR548AG1-201ENST00000579932 66 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 AL353803.5-201ENST00000599815 141 ntBASIC0.51□□□□□ -2.33
IDH3AP50213 MIR548J-201ENST00000408833 112 ntBASIC0.5□□□□□ -2.33
IDH3AP50213 Y_RNA.676-201ENST00000516393 96 ntBASIC0.5□□□□□ -2.33
IDH3AP50213 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
IDH3AP50213 MIR6514-201ENST00000622549 70 ntBASIC0.5□□□□□ -2.33
IDH3AP50213 MIR429-201ENST00000362106 83 ntBASIC0.49□□□□□ -2.33
IDH3AP50213 RNU7-119P-201ENST00000459279 63 ntBASIC0.49□□□□□ -2.33
IDH3AP50213 Y_RNA.224-201ENST00000364308 111 ntBASIC0.48□□□□□ -2.33
IDH3AP50213 MIR4714-201ENST00000580728 77 ntBASIC0.48□□□□□ -2.33
IDH3AP50213 MIR151B-201ENST00000584249 96 ntBASIC0.48□□□□□ -2.33
IDH3AP50213 snoR1.1-201ENST00000628177 80 ntBASIC0.48□□□□□ -2.33
IDH3AP50213 RNU6-246P-201ENST00000384702 107 ntBASIC0.47□□□□□ -2.33
IDH3AP50213 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.47□□□□□ -2.33
IDH3AP50213 RNU6-231P-201ENST00000517122 103 ntBASIC0.47□□□□□ -2.33
IDH3AP50213 CR383656.4-201ENST00000546909 122 ntBASIC0.47□□□□□ -2.33
IDH3AP50213 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.47□□□□□ -2.33
IDH3AP50213 RNA5SP499-201ENST00000363982 119 ntBASIC0.46□□□□□ -2.34
IDH3AP50213 MIR892B-201ENST00000401279 77 ntBASIC0.45□□□□□ -2.34
IDH3AP50213 MIR4432-201ENST00000581823 84 ntBASIC0.45□□□□□ -2.34
IDH3AP50213 MIR4315-1-201ENST00000636800 73 ntBASIC0.45□□□□□ -2.34
IDH3AP50213 MIR4315-2-201ENST00000640925 73 ntBASIC0.45□□□□□ -2.34
IDH3AP50213 MIR548H2-201ENST00000408874 88 ntBASIC0.44□□□□□ -2.34
IDH3AP50213 RNA5SP163-201ENST00000410304 99 ntBASIC0.44□□□□□ -2.34
IDH3AP50213 RNU6-141P-201ENST00000410499 105 ntBASIC0.44□□□□□ -2.34
IDH3AP50213 MIR5000-201ENST00000577717 103 ntBASIC0.44□□□□□ -2.34
IDH3AP50213 MIR148A-201ENST00000362215 68 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 Y_RNA.109-201ENST00000363215 102 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 RNA5SP325-201ENST00000363756 130 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 SNORD113-4-201ENST00000364802 75 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 RNU6-458P-201ENST00000384179 107 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 MIR1287-201ENST00000408492 90 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 RNU6-180P-201ENST00000516697 61 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 RNU6-1223P-201ENST00000517124 104 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 U6.58-201ENST00000613107 107 ntBASIC0.43□□□□□ -2.34
IDH3AP50213 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
IDH3AP50213 Y_RNA.226-201ENST00000364337 114 ntBASIC0.42□□□□□ -2.34
IDH3AP50213 RNU7-55P-201ENST00000459426 62 ntBASIC0.42□□□□□ -2.34
IDH3AP50213 RNA5SP347-201ENST00000362445 119 ntBASIC0.41□□□□□ -2.34
IDH3AP50213 RNU6-1133P-201ENST00000410963 100 ntBASIC0.41□□□□□ -2.34
IDH3AP50213 AL391099.1-201ENST00000624635 187 ntBASIC0.41□□□□□ -2.34
IDH3AP50213 RNU6-900P-201ENST00000384498 102 ntBASIC0.4□□□□□ -2.35
IDH3AP50213 MIR610-201ENST00000385139 96 ntBASIC0.4□□□□□ -2.35
IDH3AP50213 RNA5SP220-201ENST00000516298 104 ntBASIC0.4□□□□□ -2.35
IDH3AP50213 SNORD1B-201ENST00000363091 84 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 RNU6-973P-201ENST00000364690 107 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 RNA5SP247-201ENST00000411181 105 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 MIR4743-201ENST00000584576 69 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 MIR7110-201ENST00000612638 86 ntBASIC0.39□□□□□ -2.35
IDH3AP50213 SNORD116.2-201ENST00000391251 93 ntBASIC0.38□□□□□ -2.35
IDH3AP50213 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.38□□□□□ -2.35
IDH3AP50213 AC108676.2-201ENST00000605225 163 ntBASIC0.38□□□□□ -2.35
IDH3AP50213 MIR6734-201ENST00000621166 68 ntBASIC0.38□□□□□ -2.35
IDH3AP50213 uc_338.36-201ENST00000622331 158 ntBASIC0.38□□□□□ -2.35
IDH3AP50213 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
IDH3AP50213 RNU6-1312P-201ENST00000362425 108 ntBASIC0.37□□□□□ -2.35
IDH3AP50213 RNU6-455P-201ENST00000384681 107 ntBASIC0.37□□□□□ -2.35
IDH3AP50213 MIR6507-201ENST00000613630 70 ntBASIC0.37□□□□□ -2.35
IDH3AP50213 SNORA62.4-201ENST00000365504 151 ntBASIC0.36□□□□□ -2.35
IDH3AP50213 MIR593-201ENST00000384856 100 ntBASIC0.36□□□□□ -2.35
IDH3AP50213 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
IDH3AP50213 AC104408.1-201ENST00000605241 170 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 248.4 ms