Protein–RNA interactions for Protein: P35713

SOX18, Transcription factor SOX-18, humanhuman

Predictions only

Length 384 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18P35713 RNA5SP457-201ENST00000363657 124 ntBASIC0.77□□□□□ -2.29
SOX18P35713 Y_RNA.246-201ENST00000364495 108 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNA5SP128-201ENST00000365305 116 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNU6-1036P-201ENST00000383959 104 ntBASIC0.77□□□□□ -2.29
SOX18P35713 AL021921.1-201ENST00000442774 93 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNU6-848P-201ENST00000515948 107 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNU6-617P-201ENST00000516147 107 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNU6-473P-201ENST00000516164 107 ntBASIC0.77□□□□□ -2.29
SOX18P35713 RNU6-1049P-201ENST00000516414 107 ntBASIC0.77□□□□□ -2.29
SOX18P35713 SNORD114-2-201ENST00000363953 78 ntBASIC0.76□□□□□ -2.29
SOX18P35713 RNU6-175P-201ENST00000516896 107 ntBASIC0.75□□□□□ -2.29
SOX18P35713 MIR548AD-201ENST00000584780 82 ntBASIC0.75□□□□□ -2.29
SOX18P35713 Y_RNA.178-201ENST00000363832 102 ntBASIC0.74□□□□□ -2.29
SOX18P35713 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.74□□□□□ -2.29
SOX18P35713 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
SOX18P35713 AC243829.3-201ENST00000622177 108 ntBASIC0.74□□□□□ -2.29
SOX18P35713 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
SOX18P35713 Y_RNA.325-201ENST00000365171 122 ntBASIC0.73□□□□□ -2.29
SOX18P35713 RNU6-614P-201ENST00000384369 107 ntBASIC0.73□□□□□ -2.29
SOX18P35713 MIR146A-201ENST00000385201 99 ntBASIC0.73□□□□□ -2.29
SOX18P35713 SNORA49-201ENST00000386157 136 ntBASIC0.73□□□□□ -2.29
SOX18P35713 RNU6-1246P-201ENST00000391064 107 ntBASIC0.73□□□□□ -2.29
SOX18P35713 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
SOX18P35713 MIR6773-201ENST00000612812 74 ntBASIC0.73□□□□□ -2.29
SOX18P35713 U6.59-201ENST00000615686 107 ntBASIC0.73□□□□□ -2.29
SOX18P35713 RNU6-987P-201ENST00000384759 104 ntBASIC0.72□□□□□ -2.29
SOX18P35713 RNU6-863P-201ENST00000515989 104 ntBASIC0.72□□□□□ -2.29
SOX18P35713 MIR3938-201ENST00000582157 103 ntBASIC0.72□□□□□ -2.29
SOX18P35713 MIR924-201ENST00000638017 53 ntBASIC0.72□□□□□ -2.29
SOX18P35713 SNORD114-23-201ENST00000363536 72 ntBASIC0.71□□□□□ -2.3
SOX18P35713 RNU6-829P-201ENST00000363700 112 ntBASIC0.71□□□□□ -2.3
SOX18P35713 RN7SL660P-201ENST00000614852 299 ntBASIC0.71□□□□□ -2.3
SOX18P35713 AC010487.4-201ENST00000637027 61 ntBASIC0.71□□□□□ -2.3
SOX18P35713 SNORD44.1-201ENST00000363202 61 ntBASIC0.7□□□□□ -2.3
SOX18P35713 Y_RNA.115-201ENST00000363272 98 ntBASIC0.7□□□□□ -2.3
SOX18P35713 MIR519A2-201ENST00000384990 87 ntBASIC0.7□□□□□ -2.3
SOX18P35713 RNU6-337P-201ENST00000391243 106 ntBASIC0.7□□□□□ -2.3
SOX18P35713 MIR936-201ENST00000401264 98 ntBASIC0.69□□□□□ -2.3
SOX18P35713 RNU4-37P-201ENST00000410214 84 ntBASIC0.69□□□□□ -2.3
SOX18P35713 SNORA68.3-201ENST00000515906 83 ntBASIC0.69□□□□□ -2.3
SOX18P35713 MIR3925-201ENST00000584674 77 ntBASIC0.69□□□□□ -2.3
SOX18P35713 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
SOX18P35713 SNORD115-25-201ENST00000362619 82 ntBASIC0.68□□□□□ -2.3
SOX18P35713 Y_RNA.68-201ENST00000362881 102 ntBASIC0.68□□□□□ -2.3
SOX18P35713 RNA5SP121-201ENST00000516537 101 ntBASIC0.68□□□□□ -2.3
SOX18P35713 SCARNA11.2-201ENST00000517183 154 ntBASIC0.68□□□□□ -2.3
SOX18P35713 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
SOX18P35713 MIR103A1-201ENST00000362165 78 ntBASIC0.67□□□□□ -2.3
SOX18P35713 MIR527-201ENST00000385244 85 ntBASIC0.67□□□□□ -2.3
SOX18P35713 RNU6-782P-201ENST00000516852 104 ntBASIC0.67□□□□□ -2.3
SOX18P35713 SNORA41B-201ENST00000384785 128 ntBASIC0.66□□□□□ -2.3
SOX18P35713 RNA5SP330-201ENST00000517096 96 ntBASIC0.66□□□□□ -2.3
SOX18P35713 AP000676.1-201ENST00000533307 52 ntBASIC0.66□□□□□ -2.3
SOX18P35713 MIR6835-201ENST00000621552 64 ntBASIC0.66□□□□□ -2.3
SOX18P35713 MIRLET7B-201ENST00000385140 83 ntBASIC0.65□□□□□ -2.31
SOX18P35713 MIR876-201ENST00000401147 81 ntBASIC0.65□□□□□ -2.31
SOX18P35713 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.65□□□□□ -2.31
SOX18P35713 RNU6-502P-201ENST00000362419 108 ntBASIC0.64□□□□□ -2.31
SOX18P35713 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
SOX18P35713 Y_RNA.74-201ENST00000362911 99 ntBASIC0.63□□□□□ -2.31
SOX18P35713 Y_RNA.236-201ENST00000364427 111 ntBASIC0.63□□□□□ -2.31
SOX18P35713 Y_RNA.433-201ENST00000384089 102 ntBASIC0.63□□□□□ -2.31
SOX18P35713 RNA5SP470-201ENST00000516463 106 ntBASIC0.63□□□□□ -2.31
SOX18P35713 MIR8087-201ENST00000612745 78 ntBASIC0.62□□□□□ -2.31
SOX18P35713 MIRLET7D-201ENST00000362263 87 ntBASIC0.61□□□□□ -2.31
SOX18P35713 RNU6-446P-201ENST00000362827 106 ntBASIC0.61□□□□□ -2.31
SOX18P35713 RNU7-154P-201ENST00000516194 62 ntBASIC0.61□□□□□ -2.31
SOX18P35713 RNA5SP347-201ENST00000362445 119 ntBASIC0.6□□□□□ -2.31
SOX18P35713 RNA5SP257-201ENST00000363023 116 ntBASIC0.6□□□□□ -2.31
SOX18P35713 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
SOX18P35713 RNU6-127P-201ENST00000390897 107 ntBASIC0.6□□□□□ -2.31
SOX18P35713 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.6□□□□□ -2.31
SOX18P35713 MIR4711-201ENST00000578274 70 ntBASIC0.6□□□□□ -2.31
SOX18P35713 MIR330-201ENST00000362196 94 ntBASIC0.59□□□□□ -2.31
SOX18P35713 RNA5SP499-201ENST00000363982 119 ntBASIC0.59□□□□□ -2.31
SOX18P35713 RNU6-815P-201ENST00000384080 113 ntBASIC0.59□□□□□ -2.31
SOX18P35713 MIR643-201ENST00000385267 97 ntBASIC0.59□□□□□ -2.31
SOX18P35713 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
SOX18P35713 RNA5SP98-201ENST00000363158 137 ntBASIC0.58□□□□□ -2.32
SOX18P35713 Y_RNA.282-201ENST00000364793 102 ntBASIC0.58□□□□□ -2.32
SOX18P35713 AC108740.1-201ENST00000498629 225 ntBASIC0.58□□□□□ -2.32
SOX18P35713 uc_338.17-201ENST00000619633 179 ntBASIC0.58□□□□□ -2.32
SOX18P35713 snoR1.1-201ENST00000628177 80 ntBASIC0.58□□□□□ -2.32
SOX18P35713 SNORD116-16-201ENST00000384533 92 ntBASIC0.57□□□□□ -2.32
SOX18P35713 MIR106A-201ENST00000384870 81 ntBASIC0.57□□□□□ -2.32
SOX18P35713 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.57□□□□□ -2.32
SOX18P35713 RNU6-141P-201ENST00000410499 105 ntBASIC0.57□□□□□ -2.32
SOX18P35713 MIR548AG1-201ENST00000579932 66 ntBASIC0.55□□□□□ -2.32
SOX18P35713 MIR429-201ENST00000362106 83 ntBASIC0.54□□□□□ -2.32
SOX18P35713 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
SOX18P35713 MIR1197-201ENST00000408818 88 ntBASIC0.54□□□□□ -2.32
SOX18P35713 RNU7-119P-201ENST00000459279 63 ntBASIC0.54□□□□□ -2.32
SOX18P35713 RNU6-231P-201ENST00000517122 103 ntBASIC0.54□□□□□ -2.32
SOX18P35713 AL353803.5-201ENST00000599815 141 ntBASIC0.54□□□□□ -2.32
SOX18P35713 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.54□□□□□ -2.32
SOX18P35713 MIR6514-201ENST00000622549 70 ntBASIC0.54□□□□□ -2.32
SOX18P35713 RNU6-520P-201ENST00000384717 104 ntBASIC0.53□□□□□ -2.32
SOX18P35713 MIR5087-201ENST00000635826 76 ntBASIC0.53□□□□□ -2.32
SOX18P35713 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
SOX18P35713 RNU6-1312P-201ENST00000362425 108 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms