Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RN7SL793P-201ENST00000583259 296 ntBASIC1.21□□□□□ -2.22
COL8A1P27658 U2.18-201ENST00000622185 84 ntBASIC1.21□□□□□ -2.22
COL8A1P27658 RNA5SP255-201ENST00000516370 107 ntBASIC1.2□□□□□ -2.22
COL8A1P27658 AC011195.1-201ENST00000578177 177 ntBASIC1.2□□□□□ -2.22
COL8A1P27658 RNU1-29P-201ENST00000606574 126 ntBASIC1.2□□□□□ -2.22
COL8A1P27658 MIR125B1-201ENST00000385236 88 ntBASIC1.19□□□□□ -2.22
COL8A1P27658 RNU6-995P-201ENST00000391244 107 ntBASIC1.19□□□□□ -2.22
COL8A1P27658 MIR548AA1-201ENST00000384971 97 ntBASIC1.18□□□□□ -2.22
COL8A1P27658 MIR216A-201ENST00000385063 110 ntBASIC1.18□□□□□ -2.22
COL8A1P27658 SNORD99-201ENST00000408612 74 ntBASIC1.18□□□□□ -2.22
COL8A1P27658 RPS29P23-201ENST00000458635 123 ntBASIC1.18□□□□□ -2.22
COL8A1P27658 RNU6-502P-201ENST00000362419 108 ntBASIC1.17□□□□□ -2.22
COL8A1P27658 SNORD114-24-201ENST00000365029 72 ntBASIC1.17□□□□□ -2.22
COL8A1P27658 RNU6-782P-201ENST00000516852 104 ntBASIC1.17□□□□□ -2.22
COL8A1P27658 U7.6-201ENST00000610841 64 ntBASIC1.17□□□□□ -2.22
COL8A1P27658 U6.103-201ENST00000637085 61 ntBASIC1.17□□□□□ -2.22
COL8A1P27658 MIR320A-201ENST00000385302 82 ntBASIC1.16□□□□□ -2.22
COL8A1P27658 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.16□□□□□ -2.22
COL8A1P27658 RNU7-188P-201ENST00000517063 64 ntBASIC1.16□□□□□ -2.22
COL8A1P27658 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.15□□□□□ -2.22
COL8A1P27658 RNU6-822P-201ENST00000362707 106 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 SNORD45.2-201ENST00000363552 72 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 RNU6-945P-201ENST00000383947 107 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 RNU6-1262P-201ENST00000516217 96 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 RNU6-175P-201ENST00000516896 107 ntBASIC1.15□□□□□ -2.23
COL8A1P27658 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.15□□□□□ -2.23
COL8A1P27658 AL353803.5-201ENST00000599815 141 ntBASIC1.14□□□□□ -2.23
COL8A1P27658 RNU6-742P-201ENST00000365289 107 ntBASIC1.13□□□□□ -2.23
COL8A1P27658 MIR5000-201ENST00000577717 103 ntBASIC1.13□□□□□ -2.23
COL8A1P27658 RNU1-124P-201ENST00000363861 145 ntBASIC1.12□□□□□ -2.23
COL8A1P27658 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
COL8A1P27658 RNU6-721P-201ENST00000410155 105 ntBASIC1.12□□□□□ -2.23
COL8A1P27658 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
COL8A1P27658 MIR7974-201ENST00000615835 79 ntBASIC1.12□□□□□ -2.23
COL8A1P27658 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
COL8A1P27658 Y_RNA.139-201ENST00000363464 102 ntBASIC1.11□□□□□ -2.23
COL8A1P27658 AC069271.1-201ENST00000445577 156 ntBASIC1.11□□□□□ -2.23
COL8A1P27658 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.11□□□□□ -2.23
COL8A1P27658 Y_RNA.68-201ENST00000362881 102 ntBASIC1.1□□□□□ -2.23
COL8A1P27658 SNORA2A-201ENST00000383885 135 ntBASIC1.1□□□□□ -2.23
COL8A1P27658 RNU6-1036P-201ENST00000383959 104 ntBASIC1.1□□□□□ -2.23
COL8A1P27658 AC108676.2-201ENST00000605225 163 ntBASIC1.1□□□□□ -2.23
COL8A1P27658 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
COL8A1P27658 SNORD115-23-201ENST00000364461 82 ntBASIC1.09□□□□□ -2.23
COL8A1P27658 SNORD26-201ENST00000384147 75 ntBASIC1.09□□□□□ -2.23
COL8A1P27658 RNU6-1267P-201ENST00000410747 107 ntBASIC1.09□□□□□ -2.23
COL8A1P27658 RNA5SP222-201ENST00000411039 105 ntBASIC1.09□□□□□ -2.23
COL8A1P27658 RNA5SP61-201ENST00000516453 100 ntBASIC1.09□□□□□ -2.23
COL8A1P27658 SNORD57-201ENST00000448188 72 ntBASIC1.08□□□□□ -2.24
COL8A1P27658 RNA5SP404-201ENST00000517118 132 ntBASIC1.08□□□□□ -2.24
COL8A1P27658 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
COL8A1P27658 MIR26B-201ENST00000362251 77 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 RNA5SP517-201ENST00000364724 117 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 MIR29B1-201ENST00000385015 81 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 RNU6-229P-201ENST00000516614 102 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 MIR4432-201ENST00000581823 84 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 MIR4677-201ENST00000584153 80 ntBASIC1.07□□□□□ -2.24
COL8A1P27658 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
COL8A1P27658 Y_RNA.698-201ENST00000516798 118 ntBASIC1.06□□□□□ -2.24
COL8A1P27658 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.06□□□□□ -2.24
COL8A1P27658 Y_RNA.115-201ENST00000363272 98 ntBASIC1.05□□□□□ -2.24
COL8A1P27658 AC084368.1-201ENST00000620935 65 ntBASIC1.05□□□□□ -2.24
COL8A1P27658 RNU6-939P-201ENST00000384634 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 RNU6-59P-201ENST00000384787 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.04□□□□□ -2.24
COL8A1P27658 RNU6-848P-201ENST00000515948 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 RNU6-617P-201ENST00000516147 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 RNU6-473P-201ENST00000516164 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 RNU6-1049P-201ENST00000516414 107 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 MIR1273G-201ENST00000577677 100 ntBASIC1.04□□□□□ -2.24
COL8A1P27658 MIR373-201ENST00000362273 69 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 SNORD118-201ENST00000363593 134 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 MIR501-201ENST00000390204 84 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 U7.5-201ENST00000517224 61 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 AL353765.1-201ENST00000605514 183 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 SNORA25.18-201ENST00000607153 114 ntBASIC1.03□□□□□ -2.24
COL8A1P27658 RNU6-974P-201ENST00000384099 108 ntBASIC1.02□□□□□ -2.25
COL8A1P27658 MIR548H4-201ENST00000408689 111 ntBASIC1.02□□□□□ -2.25
COL8A1P27658 SNORD63.1-201ENST00000516178 80 ntBASIC1.02□□□□□ -2.25
COL8A1P27658 RNU6-1232P-201ENST00000516299 86 ntBASIC1.02□□□□□ -2.25
COL8A1P27658 Y_RNA.423-201ENST00000384057 113 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 Y_RNA.433-201ENST00000384089 102 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 MIR140-201ENST00000385282 100 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 ACA64.5-201ENST00000516207 127 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 RNU6-1174P-201ENST00000517278 101 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 RN7SL660P-201ENST00000614852 299 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 MTRNR2L9-201ENST00000622562 75 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 snoR1.1-201ENST00000628177 80 ntBASIC1.01□□□□□ -2.25
COL8A1P27658 RNA5SP457-201ENST00000363657 124 ntBASIC1□□□□□ -2.25
COL8A1P27658 Y_RNA.321-201ENST00000365149 102 ntBASIC1□□□□□ -2.25
COL8A1P27658 SNORA36.2-201ENST00000384004 127 ntBASIC1□□□□□ -2.25
COL8A1P27658 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
COL8A1P27658 AC098934.3-201ENST00000430450 190 ntBASIC1□□□□□ -2.25
COL8A1P27658 CYP3A137P-201ENST00000562436 69 ntBASIC1□□□□□ -2.25
COL8A1P27658 AL590095.2-201ENST00000604136 117 ntBASIC1□□□□□ -2.25
COL8A1P27658 AC211469.2-201ENST00000605461 205 ntBASIC1□□□□□ -2.25
COL8A1P27658 RNU6-1008P-201ENST00000384160 104 ntBASIC0.99□□□□□ -2.25
COL8A1P27658 RNU7-88P-201ENST00000458752 63 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms