Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR630-201ENST00000384957 97 ntBASIC0.71□□□□□ -2.3
RFX1P22670 AC244090.1-201ENST00000441884 93 ntBASIC0.71□□□□□ -2.3
RFX1P22670 MIR4711-201ENST00000578274 70 ntBASIC0.71□□□□□ -2.3
RFX1P22670 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
RFX1P22670 MIR20A-201ENST00000362279 71 ntBASIC0.7□□□□□ -2.3
RFX1P22670 MIR633-201ENST00000384821 98 ntBASIC0.7□□□□□ -2.3
RFX1P22670 MIR516B1-201ENST00000385211 90 ntBASIC0.7□□□□□ -2.3
RFX1P22670 RNU7-174P-201ENST00000516248 59 ntBASIC0.7□□□□□ -2.3
RFX1P22670 AC090625.1-201ENST00000357130 210 ntBASIC0.69□□□□□ -2.3
RFX1P22670 MIR517B-201ENST00000385102 67 ntBASIC0.69□□□□□ -2.3
RFX1P22670 U6.96-201ENST00000636425 70 ntBASIC0.69□□□□□ -2.3
RFX1P22670 MIR330-201ENST00000362196 94 ntBASIC0.68□□□□□ -2.3
RFX1P22670 Y_RNA.433-201ENST00000384089 102 ntBASIC0.68□□□□□ -2.3
RFX1P22670 MTND4LP19-201ENST00000403051 166 ntBASIC0.68□□□□□ -2.3
RFX1P22670 MIR466-201ENST00000580653 84 ntBASIC0.68□□□□□ -2.3
RFX1P22670 RNU6-92P-201ENST00000605893 104 ntBASIC0.68□□□□□ -2.3
RFX1P22670 RNU6-940P-201ENST00000363433 104 ntBASIC0.67□□□□□ -2.3
RFX1P22670 RNU6-698P-201ENST00000363523 107 ntBASIC0.67□□□□□ -2.3
RFX1P22670 RNU6-34P-201ENST00000364874 107 ntBASIC0.67□□□□□ -2.3
RFX1P22670 SNORA75.1-201ENST00000391130 148 ntBASIC0.67□□□□□ -2.3
RFX1P22670 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.67□□□□□ -2.3
RFX1P22670 MIR1197-201ENST00000408818 88 ntBASIC0.67□□□□□ -2.3
RFX1P22670 RNU7-188P-201ENST00000517063 64 ntBASIC0.67□□□□□ -2.3
RFX1P22670 CYP3A54P-201ENST00000566950 75 ntBASIC0.67□□□□□ -2.3
RFX1P22670 AC243829.6-201ENST00000612652 106 ntBASIC0.67□□□□□ -2.3
RFX1P22670 AC090617.8-201ENST00000623339 167 ntBASIC0.67□□□□□ -2.3
RFX1P22670 MIR499B-201ENST00000636498 73 ntBASIC0.67□□□□□ -2.3
RFX1P22670 SNORD114-29-201ENST00000364819 70 ntBASIC0.66□□□□□ -2.3
RFX1P22670 U4.4-201ENST00000620626 117 ntBASIC0.66□□□□□ -2.3
RFX1P22670 AC079150.2-201ENST00000443733 78 ntBASIC0.65□□□□□ -2.31
RFX1P22670 uc_338.17-201ENST00000619633 179 ntBASIC0.65□□□□□ -2.31
RFX1P22670 SNORD60.1-201ENST00000362451 73 ntBASIC0.64□□□□□ -2.31
RFX1P22670 RNU6-1079P-201ENST00000362861 110 ntBASIC0.64□□□□□ -2.31
RFX1P22670 SNORD113-2-201ENST00000391082 72 ntBASIC0.64□□□□□ -2.31
RFX1P22670 RNA5SP193-201ENST00000410353 107 ntBASIC0.64□□□□□ -2.31
RFX1P22670 AC084368.1-201ENST00000620935 65 ntBASIC0.64□□□□□ -2.31
RFX1P22670 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
RFX1P22670 SNORA9.1-201ENST00000362412 131 ntBASIC0.63□□□□□ -2.31
RFX1P22670 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
RFX1P22670 SNORA49-201ENST00000386157 136 ntBASIC0.63□□□□□ -2.31
RFX1P22670 RNU7-129P-201ENST00000516128 62 ntBASIC0.63□□□□□ -2.31
RFX1P22670 RNU6-122P-201ENST00000516818 107 ntBASIC0.63□□□□□ -2.31
RFX1P22670 RNU6-175P-201ENST00000516896 107 ntBASIC0.63□□□□□ -2.31
RFX1P22670 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
RFX1P22670 SNORD2-201ENST00000459163 69 ntBASIC0.62□□□□□ -2.31
RFX1P22670 SNORA62.5-201ENST00000516634 120 ntBASIC0.62□□□□□ -2.31
RFX1P22670 MIR3925-201ENST00000584674 77 ntBASIC0.62□□□□□ -2.31
RFX1P22670 RNU6-829P-201ENST00000363700 112 ntBASIC0.61□□□□□ -2.31
RFX1P22670 Y_RNA.246-201ENST00000364495 108 ntBASIC0.61□□□□□ -2.31
RFX1P22670 RNU6-1327P-201ENST00000365302 105 ntBASIC0.61□□□□□ -2.31
RFX1P22670 RNU6-337P-201ENST00000391243 106 ntBASIC0.61□□□□□ -2.31
RFX1P22670 MIR1255B2-201ENST00000408618 67 ntBASIC0.61□□□□□ -2.31
RFX1P22670 RNU6-815P-201ENST00000384080 113 ntBASIC0.6□□□□□ -2.31
RFX1P22670 RNU6-518P-201ENST00000516056 96 ntBASIC0.6□□□□□ -2.31
RFX1P22670 MIR6773-201ENST00000612812 74 ntBASIC0.6□□□□□ -2.31
RFX1P22670 Y_RNA.325-201ENST00000365171 122 ntBASIC0.59□□□□□ -2.31
RFX1P22670 RNU6-1036P-201ENST00000383959 104 ntBASIC0.59□□□□□ -2.31
RFX1P22670 RNU6-1246P-201ENST00000391064 107 ntBASIC0.59□□□□□ -2.31
RFX1P22670 AL021921.1-201ENST00000442774 93 ntBASIC0.59□□□□□ -2.31
RFX1P22670 MIR3938-201ENST00000582157 103 ntBASIC0.59□□□□□ -2.31
RFX1P22670 RN7SL660P-201ENST00000614852 299 ntBASIC0.59□□□□□ -2.31
RFX1P22670 RNU6-987P-201ENST00000384759 104 ntBASIC0.58□□□□□ -2.32
RFX1P22670 MIR876-201ENST00000401147 81 ntBASIC0.58□□□□□ -2.32
RFX1P22670 RNA5SP476-201ENST00000516613 103 ntBASIC0.58□□□□□ -2.32
RFX1P22670 MIR519A2-201ENST00000384990 87 ntBASIC0.57□□□□□ -2.32
RFX1P22670 AC114737.2-201ENST00000421583 173 ntBASIC0.57□□□□□ -2.32
RFX1P22670 AC069113.3-201ENST00000521019 150 ntBASIC0.57□□□□□ -2.32
RFX1P22670 RNU6-446P-201ENST00000362827 106 ntBASIC0.56□□□□□ -2.32
RFX1P22670 RNU4-37P-201ENST00000410214 84 ntBASIC0.56□□□□□ -2.32
RFX1P22670 RNU6-782P-201ENST00000516852 104 ntBASIC0.56□□□□□ -2.32
RFX1P22670 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.56□□□□□ -2.32
RFX1P22670 RNU6-614P-201ENST00000384369 107 ntBASIC0.55□□□□□ -2.32
RFX1P22670 SNORA41B-201ENST00000384785 128 ntBASIC0.55□□□□□ -2.32
RFX1P22670 U6.59-201ENST00000615686 107 ntBASIC0.55□□□□□ -2.32
RFX1P22670 RNU6-502P-201ENST00000362419 108 ntBASIC0.54□□□□□ -2.32
RFX1P22670 Y_RNA.236-201ENST00000364427 111 ntBASIC0.54□□□□□ -2.32
RFX1P22670 VTRNA1-3-201ENST00000365645 89 ntBASIC0.54□□□□□ -2.32
RFX1P22670 RNU6-127P-201ENST00000390897 107 ntBASIC0.54□□□□□ -2.32
RFX1P22670 AC108740.1-201ENST00000498629 225 ntBASIC0.54□□□□□ -2.32
RFX1P22670 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
RFX1P22670 MIRLET7B-201ENST00000385140 83 ntBASIC0.53□□□□□ -2.32
RFX1P22670 SCARNA11.2-201ENST00000517183 154 ntBASIC0.53□□□□□ -2.32
RFX1P22670 SNORD115-25-201ENST00000362619 82 ntBASIC0.52□□□□□ -2.33
RFX1P22670 Y_RNA.74-201ENST00000362911 99 ntBASIC0.52□□□□□ -2.33
RFX1P22670 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
RFX1P22670 HAR1A.1-201ENST00000459583 118 ntBASIC0.52□□□□□ -2.33
RFX1P22670 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
RFX1P22670 RNU6-35P-201ENST00000384530 107 ntBASIC0.51□□□□□ -2.33
RFX1P22670 MIR4315-1-201ENST00000636800 73 ntBASIC0.51□□□□□ -2.33
RFX1P22670 MIR4315-2-201ENST00000640925 73 ntBASIC0.51□□□□□ -2.33
RFX1P22670 RNU7-154P-201ENST00000516194 62 ntBASIC0.5□□□□□ -2.33
RFX1P22670 MIR548AG1-201ENST00000579932 66 ntBASIC0.5□□□□□ -2.33
RFX1P22670 Y_RNA.282-201ENST00000364793 102 ntBASIC0.49□□□□□ -2.33
RFX1P22670 RNA5SP470-201ENST00000516463 106 ntBASIC0.49□□□□□ -2.33
RFX1P22670 MIR2909-201ENST00000617113 69 ntBASIC0.49□□□□□ -2.33
RFX1P22670 MIR106A-201ENST00000384870 81 ntBASIC0.48□□□□□ -2.33
RFX1P22670 MIR527-201ENST00000385244 85 ntBASIC0.48□□□□□ -2.33
RFX1P22670 AP000676.1-201ENST00000533307 52 ntBASIC0.48□□□□□ -2.33
RFX1P22670 SNORD113-4-201ENST00000364802 75 ntBASIC0.47□□□□□ -2.33
RFX1P22670 SNORD116-16-201ENST00000384533 92 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 412.5 ms