Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 RNU6-698P-201ENST00000363523 107 ntBASIC0.57□□□□□ -2.32
COL11A2P13942 RNU6-34P-201ENST00000364874 107 ntBASIC0.57□□□□□ -2.32
COL11A2P13942 AC244090.1-201ENST00000441884 93 ntBASIC0.57□□□□□ -2.32
COL11A2P13942 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
COL11A2P13942 SNORD71-201ENST00000411292 86 ntBASIC0.56□□□□□ -2.32
COL11A2P13942 MIR6759-201ENST00000638110 65 ntBASIC0.56□□□□□ -2.32
COL11A2P13942 SNORA9.1-201ENST00000362412 131 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
COL11A2P13942 MIR4752-201ENST00000579672 72 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 MIR548AD-201ENST00000584780 82 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 SNORA33.1-201ENST00000364957 130 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 RNA5SP63-201ENST00000391225 112 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 U7.6-201ENST00000610841 64 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 U4.4-201ENST00000620626 117 ntBASIC0.55□□□□□ -2.32
COL11A2P13942 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
COL11A2P13942 AC114737.2-201ENST00000421583 173 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 AC021146.9-201ENST00000512503 156 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 RNU7-174P-201ENST00000516248 59 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 RNU7-188P-201ENST00000517063 64 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 MIR4677-201ENST00000584153 80 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 MIR548V-201ENST00000584165 80 ntBASIC0.54□□□□□ -2.32
COL11A2P13942 SNORD44.1-201ENST00000363202 61 ntBASIC0.53□□□□□ -2.32
COL11A2P13942 SNORA63.6-201ENST00000364921 119 ntBASIC0.53□□□□□ -2.32
COL11A2P13942 RNU6-175P-201ENST00000516896 107 ntBASIC0.53□□□□□ -2.32
COL11A2P13942 MIR4636-201ENST00000582271 80 ntBASIC0.53□□□□□ -2.32
COL11A2P13942 RNU6-337P-201ENST00000391243 106 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 MIR4514-201ENST00000581410 57 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 MIR3938-201ENST00000582157 103 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 RNU6-92P-201ENST00000605893 104 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 MIR760-201ENST00000390220 80 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 SNORD113-2-201ENST00000391082 72 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 RNA5SP299-201ENST00000391203 116 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 MTND4LP19-201ENST00000403051 166 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 RNU6-1232P-201ENST00000516299 86 ntBASIC0.52□□□□□ -2.33
COL11A2P13942 RNU6-302P-201ENST00000365249 107 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 RNU6-669P-201ENST00000365575 107 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 MIR519A2-201ENST00000384990 87 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 MIR501-201ENST00000390204 84 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 RNA5SP285-201ENST00000516619 119 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 MIR3925-201ENST00000584674 77 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 U2.7-201ENST00000619197 100 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 AC084368.1-201ENST00000620935 65 ntBASIC0.51□□□□□ -2.33
COL11A2P13942 RNA5SP331-201ENST00000364986 107 ntBASIC0.5□□□□□ -2.33
COL11A2P13942 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
COL11A2P13942 Y_RNA.246-201ENST00000364495 108 ntBASIC0.5□□□□□ -2.33
COL11A2P13942 SNORA62.5-201ENST00000516634 120 ntBASIC0.5□□□□□ -2.33
COL11A2P13942 AC090617.8-201ENST00000623339 167 ntBASIC0.5□□□□□ -2.33
COL11A2P13942 MIR103A1-201ENST00000362165 78 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 MIR106A-201ENST00000384870 81 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 MIR1255B2-201ENST00000408618 67 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 RNA5SP25-201ENST00000410815 110 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 MIR5087-201ENST00000635826 76 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 U6.96-201ENST00000636425 70 ntBASIC0.49□□□□□ -2.33
COL11A2P13942 RNA5SP128-201ENST00000365305 116 ntBASIC0.48□□□□□ -2.33
COL11A2P13942 MIR5589-201ENST00000579442 60 ntBASIC0.48□□□□□ -2.33
COL11A2P13942 RN7SL660P-201ENST00000614852 299 ntBASIC0.48□□□□□ -2.33
COL11A2P13942 SNORD60.1-201ENST00000362451 73 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 MIR582-201ENST00000365731 98 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 RNU6-614P-201ENST00000384369 107 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 U6.59-201ENST00000615686 107 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 Y_RNA.325-201ENST00000365171 122 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 MIR517B-201ENST00000385102 67 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 MIR499B-201ENST00000636498 73 ntBASIC0.47□□□□□ -2.33
COL11A2P13942 MIRLET7B-201ENST00000385140 83 ntBASIC0.46□□□□□ -2.34
COL11A2P13942 SCARNA11.2-201ENST00000517183 154 ntBASIC0.46□□□□□ -2.34
COL11A2P13942 MIR466-201ENST00000580653 84 ntBASIC0.46□□□□□ -2.34
COL11A2P13942 MIR6718-201ENST00000616153 80 ntBASIC0.46□□□□□ -2.34
COL11A2P13942 RNU6-502P-201ENST00000362419 108 ntBASIC0.45□□□□□ -2.34
COL11A2P13942 RNU6-987P-201ENST00000384759 104 ntBASIC0.45□□□□□ -2.34
COL11A2P13942 SCARNA21.1-201ENST00000515996 128 ntBASIC0.45□□□□□ -2.34
COL11A2P13942 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
COL11A2P13942 Y_RNA.74-201ENST00000362911 99 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 MIR633-201ENST00000384821 98 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 RNU4-37P-201ENST00000410214 84 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 MIR6773-201ENST00000612812 74 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 MIR329-2-201ENST00000385029 84 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 AL021921.1-201ENST00000442774 93 ntBASIC0.44□□□□□ -2.34
COL11A2P13942 RNU6-1036P-201ENST00000383959 104 ntBASIC0.43□□□□□ -2.34
COL11A2P13942 RNU7-154P-201ENST00000516194 62 ntBASIC0.43□□□□□ -2.34
COL11A2P13942 RNU6-782P-201ENST00000516852 104 ntBASIC0.43□□□□□ -2.34
COL11A2P13942 RNU6-945P-201ENST00000383947 107 ntBASIC0.42□□□□□ -2.34
COL11A2P13942 SNORA49-201ENST00000386157 136 ntBASIC0.42□□□□□ -2.34
COL11A2P13942 SNORA75.1-201ENST00000391130 148 ntBASIC0.42□□□□□ -2.34
COL11A2P13942 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
COL11A2P13942 MIR4802-201ENST00000581881 80 ntBASIC0.42□□□□□ -2.34
COL11A2P13942 RNA5SP98-201ENST00000363158 137 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 MIR548C-201ENST00000384815 97 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 RNU6ATAC29P-201ENST00000408088 125 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.41□□□□□ -2.34
COL11A2P13942 SNORD115-25-201ENST00000362619 82 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 RNU6-829P-201ENST00000363700 112 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
COL11A2P13942 RNU6-1079P-201ENST00000362861 110 ntBASIC0.39□□□□□ -2.35
COL11A2P13942 SNORA50A-201ENST00000384225 134 ntBASIC0.39□□□□□ -2.35
COL11A2P13942 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
COL11A2P13942 MIR876-201ENST00000401147 81 ntBASIC0.38□□□□□ -2.35
COL11A2P13942 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.38□□□□□ -2.35
COL11A2P13942 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
COL11A2P13942 MIR4315-1-201ENST00000636800 73 ntBASIC0.38□□□□□ -2.35
COL11A2P13942 MIR4315-2-201ENST00000640925 73 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 212.8 ms