Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 MIR548V-201ENST00000584165 80 ntBASIC-4.08□□□□□ -3.06
CHD1O14646 AC103810.7-201ENST00000607821 91 ntBASIC-4.08□□□□□ -3.06
CHD1O14646 AC025166.1-201ENST00000612411 163 ntBASIC-4.08□□□□□ -3.06
CHD1O14646 Y_RNA.292-201ENST00000364904 97 ntBASIC-4.09□□□□□ -3.06
CHD1O14646 AL450471.1-201ENST00000447509 127 ntBASIC-4.09□□□□□ -3.06
CHD1O14646 AC020661.2-201ENST00000560114 134 ntBASIC-4.09□□□□□ -3.06
CHD1O14646 AC090971.5-201ENST00000621102 293 ntBASIC-4.09□□□□□ -3.06
CHD1O14646 SNORD115-37-201ENST00000363768 82 ntBASIC-4.09□□□□□ -3.06
CHD1O14646 RNU6-275P-201ENST00000364910 107 ntBASIC-4.1□□□□□ -3.07
CHD1O14646 MIR1263-201ENST00000408324 86 ntBASIC-4.1□□□□□ -3.07
CHD1O14646 RNU6-523P-201ENST00000516304 54 ntBASIC-4.1□□□□□ -3.07
CHD1O14646 AL359920.1-201ENST00000618332 176 ntBASIC-4.1□□□□□ -3.07
CHD1O14646 RNU6-806P-201ENST00000365147 105 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 Y_RNA.387-201ENST00000383918 102 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 RNU6-106P-201ENST00000384405 107 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 SNORD116-29-201ENST00000384516 83 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 RNU6-813P-201ENST00000384691 107 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 MIR630-201ENST00000384957 97 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 RNY4P18-201ENST00000391107 89 ntBASIC-4.11□□□□□ -3.07
CHD1O14646 Y_RNA.19-201ENST00000362462 99 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 Y_RNA.321-201ENST00000365149 102 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 RNU6-1318P-201ENST00000365389 103 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 SNORD116-16-201ENST00000384533 92 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 MIR4796-201ENST00000580742 81 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 MIR3613-201ENST00000579844 87 ntBASIC-4.12□□□□□ -3.07
CHD1O14646 RNU6-823P-201ENST00000391042 103 ntBASIC-4.13□□□□□ -3.07
CHD1O14646 MIR1252-201ENST00000408861 65 ntBASIC-4.13□□□□□ -3.07
CHD1O14646 Y_RNA.668-201ENST00000516233 93 ntBASIC-4.13□□□□□ -3.07
CHD1O14646 MIR4694-201ENST00000578534 80 ntBASIC-4.13□□□□□ -3.07
CHD1O14646 Y_RNA.309-201ENST00000365046 111 ntBASIC-4.14□□□□□ -3.07
CHD1O14646 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-4.14□□□□□ -3.07
CHD1O14646 MTND4LP32-201ENST00000636111 270 ntBASIC-4.14□□□□□ -3.07
CHD1O14646 Y_RNA.455-201ENST00000384230 98 ntBASIC-4.15□□□□□ -3.07
CHD1O14646 RNU6-974P-201ENST00000384099 108 ntBASIC-4.15□□□□□ -3.07
CHD1O14646 RNU6-493P-201ENST00000391321 108 ntBASIC-4.15□□□□□ -3.07
CHD1O14646 MTND1P19-201ENST00000511780 315 ntBASIC-4.15□□□□□ -3.07
CHD1O14646 MIR7978-201ENST00000636158 59 ntBASIC-4.15□□□□□ -3.07
CHD1O14646 Y_RNA.29-201ENST00000362570 113 ntBASIC-4.16□□□□□ -3.08
CHD1O14646 RNU6-649P-201ENST00000384463 107 ntBASIC-4.16□□□□□ -3.08
CHD1O14646 Y_RNA.554-201ENST00000384672 102 ntBASIC-4.16□□□□□ -3.08
CHD1O14646 AC078883.4-201ENST00000623218 367 ntBASIC-4.16□□□□□ -3.08
CHD1O14646 MIR1236-201ENST00000408340 102 ntBASIC-4.17□□□□□ -3.08
CHD1O14646 RNU7-152P-201ENST00000458982 64 ntBASIC-4.17□□□□□ -3.08
CHD1O14646 MIR3675-201ENST00000583661 73 ntBASIC-4.17□□□□□ -3.08
CHD1O14646 AL160413.1-201ENST00000622780 310 ntBASIC-4.18□□□□□ -3.08
CHD1O14646 Y_RNA.645-201ENST00000391229 102 ntBASIC-4.18□□□□□ -3.08
CHD1O14646 Y_RNA.26-201ENST00000362539 101 ntBASIC-4.19□□□□□ -3.08
CHD1O14646 SNORD1B-201ENST00000363091 84 ntBASIC-4.19□□□□□ -3.08
CHD1O14646 RNU6-520P-201ENST00000384717 104 ntBASIC-4.19□□□□□ -3.08
CHD1O14646 MIR579-201ENST00000385221 98 ntBASIC-4.19□□□□□ -3.08
CHD1O14646 RNA5SP215-201ENST00000363440 122 ntBASIC-4.2□□□□□ -3.08
CHD1O14646 SNORD58A-201ENST00000383875 65 ntBASIC-4.2□□□□□ -3.08
CHD1O14646 SNORA17.4-201ENST00000391287 132 ntBASIC-4.2□□□□□ -3.08
CHD1O14646 MIR202-201ENST00000362219 110 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 Y_RNA.279-201ENST00000364763 95 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 AC130289.1-201ENST00000577321 73 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 Y_RNA.95-201ENST00000363079 95 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 Y_RNA.434-201ENST00000384090 100 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 Y_RNA.604-201ENST00000410574 102 ntBASIC-4.21□□□□□ -3.08
CHD1O14646 RNU6-530P-201ENST00000391180 107 ntBASIC-4.23□□□□□ -3.09
CHD1O14646 Y_RNA.663-201ENST00000516043 101 ntBASIC-4.23□□□□□ -3.09
CHD1O14646 RNU6-345P-201ENST00000517001 107 ntBASIC-4.23□□□□□ -3.09
CHD1O14646 RNY3P2-201ENST00000362918 102 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 RNY4P13-201ENST00000384284 96 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 RNU6-129P-201ENST00000391022 107 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 Y_RNA.63-201ENST00000362841 102 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 RNU6-361P-201ENST00000364454 107 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 Y_RNA.563-201ENST00000384707 108 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 MIR1302-6-201ENST00000408466 90 ntBASIC-4.24□□□□□ -3.09
CHD1O14646 MTND5P22-201ENST00000458380 195 ntBASIC-4.25□□□□□ -3.09
CHD1O14646 DNAJC19P2-201ENST00000593340 302 ntBASIC-4.25□□□□□ -3.09
CHD1O14646 Y_RNA.47-201ENST00000362697 108 ntBASIC-4.26□□□□□ -3.09
CHD1O14646 Y_RNA.197-201ENST00000364004 102 ntBASIC-4.26□□□□□ -3.09
CHD1O14646 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.26□□□□□ -3.09
CHD1O14646 RNU6-665P-201ENST00000384639 107 ntBASIC-4.26□□□□□ -3.09
CHD1O14646 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.27□□□□□ -3.09
CHD1O14646 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.27□□□□□ -3.09
CHD1O14646 RNU4-11P-201ENST00000365287 132 ntBASIC-4.27□□□□□ -3.09
CHD1O14646 Y_RNA.384-201ENST00000383909 102 ntBASIC-4.28□□□□□ -3.09
CHD1O14646 SNORA41B-201ENST00000384785 128 ntBASIC-4.28□□□□□ -3.09
CHD1O14646 SNORD37.2-201ENST00000391075 66 ntBASIC-4.28□□□□□ -3.09
CHD1O14646 RNU6-982P-201ENST00000516216 102 ntBASIC-4.28□□□□□ -3.09
CHD1O14646 MIR548AJ2-201ENST00000408539 92 ntBASIC-4.29□□□□□ -3.1
CHD1O14646 MIR4643-201ENST00000577473 78 ntBASIC-4.29□□□□□ -3.1
CHD1O14646 Y_RNA.281-201ENST00000364774 94 ntBASIC-4.29□□□□□ -3.1
CHD1O14646 SNORD77.2-201ENST00000391045 68 ntBASIC-4.3□□□□□ -3.1
CHD1O14646 RNU6-668P-201ENST00000364180 107 ntBASIC-4.31□□□□□ -3.1
CHD1O14646 Y_RNA.237-201ENST00000364439 102 ntBASIC-4.31□□□□□ -3.1
CHD1O14646 Y_RNA.264-201ENST00000364665 102 ntBASIC-4.31□□□□□ -3.1
CHD1O14646 MIR125B1-201ENST00000385236 88 ntBASIC-4.31□□□□□ -3.1
CHD1O14646 MIR3688-2-201ENST00000636963 87 ntBASIC-4.31□□□□□ -3.1
CHD1O14646 RNU6-972P-201ENST00000391208 107 ntBASIC-4.32□□□□□ -3.1
CHD1O14646 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-4.32□□□□□ -3.1
CHD1O14646 RNU6-639P-201ENST00000384074 107 ntBASIC-4.33□□□□□ -3.1
CHD1O14646 MIR4777-201ENST00000583710 86 ntBASIC-4.33□□□□□ -3.1
CHD1O14646 MIR1254-1-201ENST00000408257 97 ntBASIC-4.34□□□□□ -3.1
CHD1O14646 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.35□□□□□ -3.11
CHD1O14646 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-4.35□□□□□ -3.11
Retrieved 100 of 98,524 protein–RNA pairs in 252.1 ms