Protein–RNA interactions for Protein: Q9Z104

Hmg20b, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20bQ9Z104 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmg20bQ9Z104 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmg20bQ9Z104 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Gm27357-201ENSMUST00000183754 135 ntBASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Gm44454-201ENSMUST00000198541 138 ntBASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmg20bQ9Z104 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Gm7977-201ENSMUST00000193787 748 ntBASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmg20bQ9Z104 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmg20bQ9Z104 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmg20bQ9Z104 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.78■□□□□ 0.6
Hmg20bQ9Z104 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmg20bQ9Z104 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms