Protein–RNA interactions for Protein: Q9R1A9

Trex2, Three prime repair exonuclease 2, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex2Q9R1A9 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trex2Q9R1A9 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gm11336-201ENSMUST00000118168 334 ntBASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gm11355-201ENSMUST00000121120 306 ntBASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.48□□□□□ -0.25
Trex2Q9R1A9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Gm38042-201ENSMUST00000191614 5208 ntBASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trex2Q9R1A9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trex2Q9R1A9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms