Protein–RNA interactions for Protein: Q9R118

Htra1, Serine protease HTRA1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Htra1Q9R118 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Htra1Q9R118 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.82□□□□□ -0.04
Htra1Q9R118 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.82□□□□□ -0.04
Htra1Q9R118 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.82□□□□□ -0.04
Htra1Q9R118 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Htra1Q9R118 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Htra1Q9R118 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.81□□□□□ -0.04
Htra1Q9R118 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.81□□□□□ -0.04
Htra1Q9R118 Gm7791-201ENSMUST00000219066 539 ntBASIC14.81□□□□□ -0.04
Htra1Q9R118 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Htra1Q9R118 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Htra1Q9R118 Gm37305-201ENSMUST00000195714 4279 ntBASIC14.8□□□□□ -0.04
Htra1Q9R118 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Htra1Q9R118 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC14.8□□□□□ -0.04
Htra1Q9R118 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Htra1Q9R118 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.8□□□□□ -0.04
Htra1Q9R118 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Htra1Q9R118 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Htra1Q9R118 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Htra1Q9R118 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Htra1Q9R118 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC14.79□□□□□ -0.04
Htra1Q9R118 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Htra1Q9R118 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms