Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nek3Q9R0A5 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nek3Q9R0A5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nek3Q9R0A5 Gm13034-201ENSMUST00000121342 3177 ntBASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm13559-201ENSMUST00000120476 863 ntBASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nek3Q9R0A5 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Mir6404-201ENSMUST00000183699 94 ntBASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Mir7071-201ENSMUST00000184847 69 ntBASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Gm44430-201ENSMUST00000203376 995 ntBASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nek3Q9R0A5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nek3Q9R0A5 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nek3Q9R0A5 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Nek3Q9R0A5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nek3Q9R0A5 Gm37722-201ENSMUST00000193757 208 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms