Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Nubp1Q9R060 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Mir3113-201ENSMUST00000175478 76 ntBASIC13.99□□□□□ -0.17
Nubp1Q9R060 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gm43037-201ENSMUST00000196808 250 ntBASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Gm10175-201ENSMUST00000086013 645 ntBASIC13.99□□□□□ -0.17
Nubp1Q9R060 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Nubp1Q9R060 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm16107-201ENSMUST00000162523 862 ntBASIC13.98□□□□□ -0.17
Nubp1Q9R060 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm27628-201ENSMUST00000184911 107 ntBASIC13.98□□□□□ -0.17
Nubp1Q9R060 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.98□□□□□ -0.17
Nubp1Q9R060 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Nubp1Q9R060 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm43808-201ENSMUST00000202534 2065 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm4995-201ENSMUST00000117247 432 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm28975-201ENSMUST00000186412 686 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm19080-201ENSMUST00000196082 550 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm45359-201ENSMUST00000210635 427 ntBASIC13.97□□□□□ -0.17
Nubp1Q9R060 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nubp1Q9R060 Gm8655-201ENSMUST00000221159 852 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms